Information report for OsCYP20-2
Gene Details
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Functional Descriptions
- The rice thylakoid lumenal cyclophilin OsCYP20-2 confers enhanced environmental stress tolerance in tobacco and Arabidopsis.
- A cypclophilin OsCYP20-2 with a variant interacts with SLR1 and OsFSD2 in nucleus and chloroplast respectively to integrate chilling tolerance and cell elongation.
- Cyclophilin OsCYP20-2 with a novel variant integrates defense and cell elongation for chilling response in rice.
- Here, we reported a cyclophilin OsCYP20-2 was shown to function in stress response and cell elongation.
- The loss-of function OsCYP20-2 mutant showed sensitive to chilling stress with accumulation extra ROS during chilling stress.
- In chloroplast, the full-length OsCYP20-2 promotes OsFSD2 forming homodimer and enhances its activity, which eliminates the accumulation of ROS under chilling stress.
- In nucleus, OsCYP20-2 made conformation change of SLR1 to promote its degradation for cell elongation.
Functional Keywords
- stress-tolerance , chloroplast , defense , tolerance , stress , nucleus , cell-elongation , chilling , stress-response
Literature and News
- The rice thylakoid lumenal cyclophilin OsCYP20-2 confers enhanced environmental stress tolerance in tobacco and Arabidopsis . DOI: 10.1007/s00299-011-1176-x ; PMID: 22041789
- Cyclophilin OsCYP20-2 with a novel variant integrates defense and cell elongation for chilling response in rice . DOI: 10.1111/nph.16324 ; PMID: 31736073
Gene Resources
- UniProt: Q75M32
- EMBL: AK061557, AK104195, AK104478
- AlphaFoldDB: Q75M32
- EnsemblPlants: Os05t0103200-01, Os05t0103200-02
- Gramene: Os05t0103200-01, Os05t0103200-02
- KEGG: osa:4337539
- Orthologous matrix: HPGDRPK
- InterPro: IPR002130, IPR020892, IPR029000
- PANTHER: PTHR11071, PTHR11071:SF561
- SUPFAM: SSF50891
- PROSITE: PS00170, PS50072
- Gene3D: 2.40.100.10
- OrthoDB: Q75M32
- SWISS-MODEL: Q75M32
- Conserved Domain Database: cd01926
- eggNOG: KOG0880
Sequences
cDNA Sequence
- >LOC_Os05g01270.1
TTCCTGTGCACACATATGCAAAAATGCCATCCATTCATCCCAGTGCAATGCCCTATCTACCTATCCAATCCCAATCCACCTGAGCGAGAGAGAGAGAAAGGGTCTCCTCCTCAACATCAACAATGGCGGTCGCAACCTCCTTCGCCACACTCGCCATCGCGCGGCCGGCGGCGGAGCGGGCCCTCCTCGCCTCCAAAACCCCCTCGCCGCTCCTCTCCATCCGCACCGGCACCGGCACCGCACGCCTCCCCTCATCGGCCGTCTTTGGAGGTTTCACTCCTGCGCTTTCCGCTGCTCACAGCCGCGCGCGCTTCGTCTCCTCCGCCACCGCTGACCCCAAGGAAGTGGACCTCCAGTCCAAAATCACAAACAAGGTGTACTTTGACATAAGCATCGGAAACCCTGTTGGGAAGAACGTTGGGAGGGTCGTTATTGGCCTATACGGGGATGATGTTCCCCAGACCGCAGAGAACTTCCGTGCTCTTTGCACTGGAGAAAAAGGGTTTGGTTACAAGGGGTCCAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGGGAGGAGACTTTGACAAGGGCAACGGTACTGGAGGGAAAAGCATATATGGCCGGACCTTCAAAGACGAGAACTTCAAATTGGTTCATACTGGACCTGGAGTGGTCAGCATGGCCAATGCTGGGCCAAACACCAATGGCAGCCAGTTCTTCATCTGCACTGTCAAGACACCTTGGTTGGATGGGAGGCACGTCGTGTTTGGGCAGGTTATTGAAGGCATGGACATCGTTAAGATGATCGAATCGCAGGAGACTGACAGAGGGGACCGCCCGAAGAAGAAGGTGGTCATCAGTGAGTGTGGGGAGCTTCCAGTGGTCTAATAGGTGCCAGAGGGCTAATCTTCTTCCCCCGGAGACTTTGCTGTTTTTGGTTTCATAGTAAGCTGTGAACTTATCGCATGTTCTCCGCGCAGTCAGAGATCATGCTGAGTTGAGGCCAAGATTTCTAAGTTGAGAAGAATCCTCTATTGTTCGGCTGGAATAAAACGTTCTTACCTGTCGAGGGTCAGGAAATAATGTTGTGGTTCATGAAAGATCAAATGTCTGTCTTTTCGTGCATACGCAGACTAAAGTTACTCCTTTCCCAATACCTTTTGTTGCTGCATA
CDS Sequence
- >LOC_Os05g01270.1
ATGGCGGTCGCAACCTCCTTCGCCACACTCGCCATCGCGCGGCCGGCGGCGGAGCGGGCCCTCCTCGCCTCCAAAACCCCCTCGCCGCTCCTCTCCATCCGCACCGGCACCGGCACCGCACGCCTCCCCTCATCGGCCGTCTTTGGAGGTTTCACTCCTGCGCTTTCCGCTGCTCACAGCCGCGCGCGCTTCGTCTCCTCCGCCACCGCTGACCCCAAGGAAGTGGACCTCCAGTCCAAAATCACAAACAAGGTGTACTTTGACATAAGCATCGGAAACCCTGTTGGGAAGAACGTTGGGAGGGTCGTTATTGGCCTATACGGGGATGATGTTCCCCAGACCGCAGAGAACTTCCGTGCTCTTTGCACTGGAGAAAAAGGGTTTGGTTACAAGGGGTCCAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGGGAGGAGACTTTGACAAGGGCAACGGTACTGGAGGGAAAAGCATATATGGCCGGACCTTCAAAGACGAGAACTTCAAATTGGTTCATACTGGACCTGGAGTGGTCAGCATGGCCAATGCTGGGCCAAACACCAATGGCAGCCAGTTCTTCATCTGCACTGTCAAGACACCTTGGTTGGATGGGAGGCACGTCGTGTTTGGGCAGGTTATTGAAGGCATGGACATCGTTAAGATGATCGAATCGCAGGAGACTGACAGAGGGGACCGCCCGAAGAAGAAGGTGGTCATCAGTGAGTGTGGGGAGCTTCCAGTGGTCTAA
Protein Sequence
- >LOC_Os05g01270.1
MAVATSFATLAIARPAAERALLASKTPSPLLSIRTGTGTARLPSSAVFGGFTPALSAAHSRARFVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGELPVV*