Information report for OsPAO5
Gene Details
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Functional Descriptions
- Here, we established that OsPAO5 expression in rice seedlings is increased in the presence of light, and inhibited by darkness.
- Intriguingly, knocking out of OsPAO5 can remarkably increase the grain weight, grain numbers and yield potential.
- Nucleotide polymorphism analysis revealed that an SNP variation (PAO5-578G/A) in the 578 bp upstream of OsPAO5 start codon alters its expression, which is further selected during rice mesocotyl domestication.
Functional Keywords
- seedlings , grain , domestication , grain-number , yield , grain-weight
Literature and News
Gene Resources
- UniProt: Q0J954
- EMBL: AK072414, AL606652, AP008210
- AlphaFoldDB: Q0J954
- EnsemblPlants: Os04t0671300-01
- Gramene: Os04t0671300-01
- KEGG: dosa:Os04g0671300, osa:4337360
- Orthologous matrix: CWDQDEC
- InterPro: IPR001613, IPR002937, IPR036188
- PANTHER: PTHR10742, PTHR10742:SF228
- SUPFAM: SSF51905, SSF54373
- Gene3D: 3.50.50.60, 3.90.660.10
- OrthoDB: Q0J954
- SWISS-MODEL: Q0J954
- eggNOG: KOG0029
Sequences
cDNA Sequence
- >LOC_Os04g57560.1
ACCGCATCATCGGCTTCCCTCCGGCTCGAGCCAATCTCTCGCTGTGTCTCTCTCGCGCTCTCCACTAGCACCGGCTCGGCTCGGCTCGCGCGGCGGCGGCGGCGGGGCGGCGTGGCGCCGAGGGAGGGGAACGCCGGTGTGGGGAGGGCGGCGGCGAGGGGACTCGCCGGCGACGAGCTGGTTTGGGTATGAGAGGGGTTACCCATGCGGCGCCGACCACGAGCGTCCCCCGCCGCGGCTCCATGGACGGCCTCCTCATCTTCGTCTTCTACCTCTCGCTTCCTATACGTGGTGGCCGCGACCACTCGTTAATCTCCTCCTCTAATTGTTAGCCGATCTCGCCTCTCCCCCACACTCTCTGATCCCGCTCTCTCTCTCTGCTTCGATTCGATTCGATTCGATCTTCTCCACCTCGTCGCCGTCGAACGCAACTCGGATCGGGAGGATAATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGAAAGAAGAACAAAGCCTGCCTATTTAGCACCGTGTTTATCCTGCAGCTGCTATGGTTAATATTGTAGCTGCTGCTCTGTAGTTTCCTAATTATCTCAGATCCTGTACCGTTTCACAGTTTGATCGTTTATGTGTATTCAAATAAAAACAGAATAATTATATATCAACAGACCTTGTTCTCTGAATCCATGGATATTGCTTTTCATTTACACA
CDS Sequence
- >LOC_Os04g57560.1
ATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGA
Protein Sequence
- >LOC_Os04g57560.1
MDQPSNGFAAGGLFLRHIDGQNASPPSVIVIGGGISGIAAARALSNASFKVTLLESRDRLGGRVHTDYSFGCPIDMGASWLHGVCNENSLAPLIRLLGLRLYRTSGDNSVLYDHDLESYALFDKDGRQVPQEIVTKVGETFEKILKETVKVRAEHEDDMPLIQAISIVLDRNPHLKLDGLQYEVLQWCICRLEAWFATDVDNISLKNWDQEHVLTGGHGLMVHGYDPVIKALAQDLDIHLNHRVTKIIQRYNKTIVCVEDGTSFVADAAIITVPLGVLKANIIKFEPELPDWKLSSISDLGIGIENKIALRFNSVFWPNVEVLGRVAPTSNACGYFLNLHKATGHPVLVCMVAGRFAYEFEKLSDEESVNFVMSQLKKMLPGATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCAPVGNLFFAGEAACIDHSGSVHGAYSSGIVAAEDCRRHLSTQLGISDLFQVGKIIMREEMTEVMVPFQISRL*