Gene Details:
- MSU gene ID: LOC_Os04g57560
- RAPdb gene ID: Os04g0671300
- Gene Symbol: OsPAO5
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here, we established that OsPAO5 expression in rice seedlings is increased in the presence of light, and inhibited by darkness.
- Intriguingly, knocking out of OsPAO5 can remarkably increase the grain weight, grain numbers and yield potential.
- Nucleotide polymorphism analysis revealed that an SNP variation (PAO5-578G/A) in the 578 bp upstream of OsPAO5 start codon alters its expression, which is further selected during rice mesocotyl domestication.
Function-related keywords:
- seedlings , grain , domestication , grain-number , yield , grain-weight
Literature:
- Targeted mutagenesis of POLYAMINE OXIDASE 5 that negatively regulates mesocotyl elongation enables the generation of direct-seeding rice with improved grain yield . DOI: 10.1016/j.molp.2020.11.007 ; PMID: 33220510
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g57560.1
ACCGCATCATCGGCTTCCCTCCGGCTCGAGCCAATCTCTCGCTGTGTCTCTCTCGCGCTCTCCACTAGCACCGGCTCGGCTCGGCTCGCGCGGCGGCGGCGGCGGGGCGGCGTGGCGCCGAGGGAGGGGAACGCCGGTGTGGGGAGGGCGGCGGCGAGGGGACTCGCCGGCGACGAGCTGGTTTGGGTATGAGAGGGGTTACCCATGCGGCGCCGACCACGAGCGTCCCCCGCCGCGGCTCCATGGACGGCCTCCTCATCTTCGTCTTCTACCTCTCGCTTCCTATACGTGGTGGCCGCGACCACTCGTTAATCTCCTCCTCTAATTGTTAGCCGATCTCGCCTCTCCCCCACACTCTCTGATCCCGCTCTCTCTCTCTGCTTCGATTCGATTCGATTCGATCTTCTCCACCTCGTCGCCGTCGAACGCAACTCGGATCGGGAGGATAATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGAAAGAAGAACAAAGCCTGCCTATTTAGCACCGTGTTTATCCTGCAGCTGCTATGGTTAATATTGTAGCTGCTGCTCTGTAGTTTCCTAATTATCTCAGATCCTGTACCGTTTCACAGTTTGATCGTTTATGTGTATTCAAATAAAAACAGAATAATTATATATCAACAGACCTTGTTCTCTGAATCCATGGATATTGCTTTTCATTTACACA
CDS Sequence
- >LOC_Os04g57560.1
ATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGA
Protein Sequence
- >LOC_Os04g57560.1
MDQPSNGFAAGGLFLRHIDGQNASPPSVIVIGGGISGIAAARALSNASFKVTLLESRDRLGGRVHTDYSFGCPIDMGASWLHGVCNENSLAPLIRLLGLRLYRTSGDNSVLYDHDLESYALFDKDGRQVPQEIVTKVGETFEKILKETVKVRAEHEDDMPLIQAISIVLDRNPHLKLDGLQYEVLQWCICRLEAWFATDVDNISLKNWDQEHVLTGGHGLMVHGYDPVIKALAQDLDIHLNHRVTKIIQRYNKTIVCVEDGTSFVADAAIITVPLGVLKANIIKFEPELPDWKLSSISDLGIGIENKIALRFNSVFWPNVEVLGRVAPTSNACGYFLNLHKATGHPVLVCMVAGRFAYEFEKLSDEESVNFVMSQLKKMLPGATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCAPVGNLFFAGEAACIDHSGSVHGAYSSGIVAAEDCRRHLSTQLGISDLFQVGKIIMREEMTEVMVPFQISRL*