Information report for gene-LSAT_9X116880
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Capsicum annuum: T459_25488
- Daucus carota: DCAR_029206
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Nicotiana attenuata: A4A49_07894
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
- Solanum tuberosum: PGSC0003DMG400044864
- Vitis vinifera: VIT_03s0017g01000
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A9R1WSX6
- EMBL: NBSK02000009
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A9R1WSX6
Sequences
CDS Sequence
- >gene-LSAT_9X116880
ATGGACACCGCCATGGAAACGACGGAATCCCGAGCCGACGCCTCCGACAACCCCAACAATGGCTCCTCCGGCGACGATGACACTTCTCTCGAAATCAGCCATCCTCCCTCACTCCTAACCCCAACCGTTGCTCCTTCCCTTGCCGGTACGGCGTCAGACAACGTCTTGCCGGACTCAACCCTCCAAACCACCGGTGAGTCTGTTGAACTTATGGAACCAGCTGCAGTTAACACCGATGGTCTACCTGCACCTCGAAAACGTCGCCGTCGAAAGAAGCAGTTCCCAGAGATGATATCCATCGCCGCCGCCGTAGACGGCCTGGGCGTTATCCGCCACAAATCTGGTAACAGATCAACAGAAGATATCGATGAATACGAAGACGACGACCCATCATCTCGCCGTCGACGGAGAATATCATCAGATCTCGACGTCGAGGGTCTAATCGCGATTTCCGTTGGATTCCCCGCCGATTCGCTGACTGAAGAGGAGATTGAAGCCAACGTCGTCAAAACAATCGGCGGAACTGAGCAATCAAACTACATCGTCGTTCGCAACCACATTCTCGCCCTGTGGCGATCAAATGTTGATGTTTGGTTAACCAGAGATCATGCACTGGAGGCGATCCGACTCGAACACACAAACCTTGTCGACTCTGCGTACTCGTTTCTCCTTGAACACGGTTACATCAACTTCGGCGTCGCCGCCGCCGTGAAGGAAGCCAAATTGAAACCCCCCGAGGGTGTTTCCAGAGGTGATGTTATCGTAATCGGCGCCGGACTCTCTGGATTAGTAGCAGCAAGACAATTGATTTTTCTAGGGTTTAAAGTCGTGGTTCTAGAGGGCAGATCCCGGCCAGGCGGCCGTGTTCGCACGAAGAAAATGTCAGGTGGCGATTGTGTCGCTGCAGCAGATCTAGGCGGCAGTGTACTCACCGGAATCAATGGCAATCCCCTTGGAGTTCTAGCTCGACAACTAGGGTTTCCTCTTCACAAAGTTAGAGACATTTGCCCTCTTTATCTCCCCAATGGAAGAACTGTAAACCCTGAAATCGATTCAAAAGTTGAAGTTTCCTTCAATAAACTCCTGGATAGAGTCTGCAAGCTCCGGCAATCAATGATGGAAGAAGCAAAATCCATTGACGTTCCATTAGGTACAGCTCTAGAAGCTTTCCGACAGGTTTACAGAGTAGCAGAAGACCCACAAGAGAAAATGCTCCTAGATTGGCACTTAGCTAATCTAGAATACGCAAACGCAACATTAATGTCAAATCTCTCCATGGTTTTCTGGGATCAAGATGATCCGTTTGAAATGGGTGGTGATCATTGCTTCATTCCAGGAGGAAACGATCTGTTCATCAGAGCTTTATCCGAAAACCTTCCCATTTTCTACAATCAAACAGTCGAACGCATCAAATATGGATCTAATGGCGTCTCAATCTCTGCAAACGGACAAGATTATCACGCAGATATGGTTCTCTGTACAGTTCCATTAGGCGTGCTAAAGAAGAAATCAATCGAATTCATCCCCGATCTTCCTGAAAGAAAGAAAGACGCAATCGATAGATTAGGTTTCGGGTTATTAAACAAAGTAGCCATCTTATTTCCTTACGATTTCTGGGGAGGCGAGATTGATACATTCGGTCATCTATCTGATAAATCAAGTATGAGAGGTGAGTTCTTTTTATTCTACAGCTACTCATCTGTCTCCGGTGGGCCACTTTTGGTTGCTCTGGTGGCCGGAGAAGCTGCAATTGAGTTTGAAAAGATGTCTCCGGTGGAATCTGTTACAAGAGTTATGGAGATTTTGAAGGGGATTTTTAATCCAAAAGGGATTGCAGTGCCGGACCCACTTCAGGCAATATGCACACGGTGGGGCCAGGATCAGTTTTCTTATGGATCTTATTCTTATGTTGGAATTGGTGCTTCTGGAAATGATTATGATATACTGGCGGAGAACATCGGAGGTGGTAGAGTTTTCTTCGCCGGAGAAGCTACTAATAAACTTTATCCGGCGACTATGCATGGGGCGTTTCTTAGTGGGTTGAGAGAGGCGGCTAATATGTCTAGAATTGAGAAGCGGAGGAGGTTGAAGTTGAATGAGGGCAAATAA
Protein Sequence
- >gene-LSAT_9X116880
MDTAMETTESRADASDNPNNGSSGDDDTSLEISHPPSLLTPTVAPSLAGTASDNVLPDSTLQTTGESVELMEPAAVNTDGLPAPRKRRRRKKQFPEMISIAAAVDGLGVIRHKSGNRSTEDIDEYEDDDPSSRRRRRISSDLDVEGLIAISVGFPADSLTEEEIEANVVKTIGGTEQSNYIVVRNHILALWRSNVDVWLTRDHALEAIRLEHTNLVDSAYSFLLEHGYINFGVAAAVKEAKLKPPEGVSRGDVIVIGAGLSGLVAARQLIFLGFKVVVLEGRSRPGGRVRTKKMSGGDCVAAADLGGSVLTGINGNPLGVLARQLGFPLHKVRDICPLYLPNGRTVNPEIDSKVEVSFNKLLDRVCKLRQSMMEEAKSIDVPLGTALEAFRQVYRVAEDPQEKMLLDWHLANLEYANATLMSNLSMVFWDQDDPFEMGGDHCFIPGGNDLFIRALSENLPIFYNQTVERIKYGSNGVSISANGQDYHADMVLCTVPLGVLKKKSIEFIPDLPERKKDAIDRLGFGLLNKVAILFPYDFWGGEIDTFGHLSDKSSMRGEFFLFYSYSSVSGGPLLVALVAGEAAIEFEKMSPVESVTRVMEILKGIFNPKGIAVPDPLQAICTRWGQDQFSYGSYSYVGIGASGNDYDILAENIGGGRVFFAGEATNKLYPATMHGAFLSGLREAANMSRIEKRRRLKLNEGK