Information report for OsTubA1
Gene Details
|
|
Functional Descriptions
- RNA gel-blot analysis demonstrated that OsTubA1 RNA was accumulated mainly at root tips, supporting that the gene is expressed preferentially in actively dividing tissues: root tips, young leaves, and flowers of the meiotic to mitotic pollen stage during rice growth and development.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q75GI3
- EMBL: AP014959, DP000009, DQ683569
- AlphaFoldDB: Q75GI3
- EnsemblPlants: Os03t0726100-01
- Gramene: Os03t0726100-01
- KEGG: osa:4333966
- Orthologous matrix: YMASCIL
- InterPro: IPR000217, IPR002452, IPR003008
- PANTHER: PTHR11588
- SUPFAM: SSF52490, SSF55307
- PROSITE: PS00227
- Gene3D: 1.10.287.600, 3.30.1330.20, 3.40.50.1440
- OrthoDB: Q75GI3
- SWISS-MODEL: Q75GI3
- Conserved Domain Database: cd02186
- eggNOG: KOG1376
Sequences
cDNA Sequence
- >LOC_Os03g51600.1
AAACCCTAAGCCGAGACAACGCAGAGAAAGGCGTCTTCGTACTCGCCTCTCTCCGCGCCTCCGCGCTTTTCCTCCTCCTCTCCCCTCTCTCCCTTCTCCGCCGCCGTCGCAGCATCAACCCAATCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAGAGGAGTCGTCGTCGTCTGGGGGCTTGATGTTCTGTGTGTCAAGGCCTGATTGATAACTGCTGCTATCCCATGATCTGCCAGTGTGGAGTTATCCTGTTGCCGTGTGCGTGTGTCTTCGAGACATTTGCTTGTGGTGATCTGATGTTTGGGGCTTAATGGGCTTACAACCCTCGTTGTTGTAACCTGTGTGCCCTGTTTTATGTGAGACCGCTTCGTCACTTATAATATGCGCGTTTGTTCAATTTTATGTTTGTTTCTTGTGTTGATTACGGTTTACTCTCGACTGTGGAACTTGGTATGTTTCAAGGTTTACGTGCTTCTCCTGCTGACAACCCATTACTGGCTCCGATCTTAAGAAAAGAACAGTTCGTTATTAGTGC - >LOC_Os03g51600.2
AAACCCTAAGCCGAGACAACGCAGAGAAAGGCGTCTTCGTACTCGCCTCTCTCCGCGCCTCCGCGCTTTTCCTCCTCCTCTCCCCTCTCTCCCTTCTCCGCCGCCGTCGCAGCATCAACCCAATCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAGAGGAGTCGTCGTCGTCTGGGGGCTTGATGTTCTGTGTGTCAAGGCCTGATTGATAACTGCTGCTATCCCATGATCTGCCAGTGTGGAGTTATCCTGTTGCCGTGTGCGTGTGTCTTCGAGACATTTGCTTGTGGTGATCTGATGTTTGGGGCTTAATGGGCTTACAACCCTCGTTGTTGTAACCTGTGTGCCCTGTTTTATGTGAGACCGCTTCGTCACTTATAATATGCGCGTTTGTTCAATTTTATGTTTGTTTCTTGTGTTGATTACGGTTTACTCTCGACTGTGGAACTTGGTATGTTTCAAGGTTTACGTGCTTCTCCTGCTGACAACCCATTACTGGCTCCGATCTTAAGAAAAGAACAGTTCGTTATTAGTGC
CDS Sequence
- >LOC_Os03g51600.1
ATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAG - >LOC_Os03g51600.2
ATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAG
Protein Sequence
- >LOC_Os03g51600.1
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESDENEDGDDGDEY* - >LOC_Os03g51600.2
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESDENEDGDDGDEY*