Gene Details:
- MSU gene ID: LOC_Os03g51600
- RAPdb gene ID: Os03g0726100
- Gene Symbol: OsTubA1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- RNA gel-blot analysis demonstrated that OsTubA1 RNA was accumulated mainly at root tips, supporting that the gene is expressed preferentially in actively dividing tissues: root tips, young leaves, and flowers of the meiotic to mitotic pollen stage during rice growth and development.
Function-related keywords:
Literature:
- Tissue-preferential expression of a rice alpha-tubulin gene, OsTubA1, mediated by the first intron . DOI: 10.1104/pp.123.3.1005 ; PMID: 10889249
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g51600.1
AAACCCTAAGCCGAGACAACGCAGAGAAAGGCGTCTTCGTACTCGCCTCTCTCCGCGCCTCCGCGCTTTTCCTCCTCCTCTCCCCTCTCTCCCTTCTCCGCCGCCGTCGCAGCATCAACCCAATCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAGAGGAGTCGTCGTCGTCTGGGGGCTTGATGTTCTGTGTGTCAAGGCCTGATTGATAACTGCTGCTATCCCATGATCTGCCAGTGTGGAGTTATCCTGTTGCCGTGTGCGTGTGTCTTCGAGACATTTGCTTGTGGTGATCTGATGTTTGGGGCTTAATGGGCTTACAACCCTCGTTGTTGTAACCTGTGTGCCCTGTTTTATGTGAGACCGCTTCGTCACTTATAATATGCGCGTTTGTTCAATTTTATGTTTGTTTCTTGTGTTGATTACGGTTTACTCTCGACTGTGGAACTTGGTATGTTTCAAGGTTTACGTGCTTCTCCTGCTGACAACCCATTACTGGCTCCGATCTTAAGAAAAGAACAGTTCGTTATTAGTGC - >LOC_Os03g51600.2
AAACCCTAAGCCGAGACAACGCAGAGAAAGGCGTCTTCGTACTCGCCTCTCTCCGCGCCTCCGCGCTTTTCCTCCTCCTCTCCCCTCTCTCCCTTCTCCGCCGCCGTCGCAGCATCAACCCAATCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAGAGGAGTCGTCGTCGTCTGGGGGCTTGATGTTCTGTGTGTCAAGGCCTGATTGATAACTGCTGCTATCCCATGATCTGCCAGTGTGGAGTTATCCTGTTGCCGTGTGCGTGTGTCTTCGAGACATTTGCTTGTGGTGATCTGATGTTTGGGGCTTAATGGGCTTACAACCCTCGTTGTTGTAACCTGTGTGCCCTGTTTTATGTGAGACCGCTTCGTCACTTATAATATGCGCGTTTGTTCAATTTTATGTTTGTTTCTTGTGTTGATTACGGTTTACTCTCGACTGTGGAACTTGGTATGTTTCAAGGTTTACGTGCTTCTCCTGCTGACAACCCATTACTGGCTCCGATCTTAAGAAAAGAACAGTTCGTTATTAGTGC
CDS Sequence
- >LOC_Os03g51600.1
ATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAG - >LOC_Os03g51600.2
ATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGAGCATGGCATCCAGGCTGATGGTCAGATGCCCAGTGACAGGACTGTTGGTGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTTCCCCGTGCTGTATTTGTTGATCTTGAGCCTACTGTGATTGATGAGGTGAGGACTGGTTGCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAATGGCAAGGAGGATGCAGCTAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCAGGAAGCTTGCTGACAACTGCACTGGTCTCCAAGGTTTCCTTGTGTTCAACGCTGTTGGAGGTGGAACGGGCTCTGGTCTTGGTTCCCTTCTCCTGGAGCGCCTTTCTGTGGACTATGGCAAGAAGTCCAAGCTTGGGTTCACTGTGTACCCATCCCCTCAGGTCTCCACCTCTGTGGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCTTGAGCACACTGATGTTGCTGTTCTGCTTGATAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACCTACACCAACCTCAACAGGCTTGTGTCTCAGGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTGTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTCTCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGCCGCCGTCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGCATCAACTACCAGCCGCCCAGCGTCGTCCCCAGCGGCGACCTCGCCAAGGTGCAGAGGGCCGTGTGCATGATCTCCAACTCCACCAGCGTCGTGGAGGTGTTCTCCCGCATCGACCACAAGTTCGACCTCATGTACTCCAAGCGCGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGATCTCGCCGCGTTGGAGAAGGACTACGAGGAGGTTGGCGCTGAGTCCGACGAGAATGAGGATGGCGATGATGGTGACGAGTACTAG
Protein Sequence
- >LOC_Os03g51600.1
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESDENEDGDDGDEY* - >LOC_Os03g51600.2
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESDENEDGDDGDEY*