Information report for Zm00001eb104640
Gene Details
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Functional Annotation
- STRING: Zm00001eb104640 — (Zea mays)
- GO:0003924 — Molecular Function — GTPase activity
- GO:0005525 — Molecular Function — GTP binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Brachypodium distachyon: Bradi4g37730.1.p
- Panicum virgatum: Pavir.2KG417800.1.p, Pavir.2NG471800.1.p
- Setaria italica: Seita.2G305400.1.p
- Setaria viridis: Sevir.2G316300.1.p
Sequences
CDS Sequence:
- >Zm00001eb104640|Zea_mays|Trihelix|Zm00001eb104640
ATGGAGGGTGCTGCCGTTTCTAGTCTGACGATTGCACTCGAGAAGCAGTCCAGGCTCCTGCGCGCGATCTGTGACCGGTTGTCGGCACAGGATGCGCCTTGGGCTTCGCTCGAGTCCGCCACCACCGAGCACCTCGATGCCGTGGAGGCTGCTGCGGCAACTCGCGTCGGCGCGCCGGAATCGTGGCGACCGCACGTCGAGCTGCGCTACGAGGAGCCCGTCACCGCCGACAACTGGGGTGGCCTGTTCGAGCACTCGGGTGTCATTACCGCGGAGGTTGGGAGCTCACCGGAGGAGGTGATCACCGACGACTGGGGCGACCTCTTCTGCAGAGGCGTCGACTCCGACGAGCAGCTCTGCGATTCGCTCCATTCCGCGTCGATTCGCTCTTTGGAGGAGGCGTTTGCCCGTGAGGATCCCATTCCCTCGCGGGCGGATCTCGGGATCCAACTCTCGGCCACCACCGAGCGCCTCGATGCCGTGGAGGCGGCTGTGGCAACTCACGTCGACGCGCTGGAGTCGTGGCGTCTGCGTGTCGAGGCCCGCGCTTCGGTCCACCTATGTGGATTCTTCGATGGCACTGACGTCACCAAGCTGCCTACCACCTGTTCGACTTCGGGGCTCACAACCAAACTCGCCATGGCGCACTATGGCTCGCATCTACCCGGTGATAAGGGAGGTTCTGCCGCGTCGTGGCAGCCGGTGCGGTCGCTGGCGCTCGCGGTCCACGTTGAGTCGCAGTGCCAGCAGGCGTCCTCCGCGTGCGGCACGCCGGCCATGGCCAGCATGGGGAAGATGAGCGTCGGGGACCTCACGGAGGCCGACCTCAAGGGGAAGCACATCTTCGTGTGCGCCGAGATCCACGAGCCACCCGACGAGAACCAGAACAGCACCAACGACATCCTCTCCACCTCGTGCGACACTGCCGTGGACCAGAGGCGGACCGAGTGCCTAGGCAGTACAGGCCGTCGCCTGGGCTGCCAGCCTGCCACGCCACGAGAGTGCATGCTGTCAGTAATTCCTGGGTCCGCCACTGCCGTGGACGTCGTGAAGCGGTGCCAACGCCTGTTTCCGCTCGCGGACTCGACCGGCGCGTTCGACGCGACCGTGGCGGCGCGGGTGACCCAGATGGCCGTGTCGTCGCCAGCCAGGAACACAACGCCCACAGGCTCCTCCCCGGAGAGCACGGCGTGCTGGTTCCCGTGCGACAACAAGAGCAGCAAGCAGCTGCAGCGTGGCGGGCCATTGTTGGATGGGTCGGACGGAGCGTCATTCAGGGTCGGCATGCAGTTGAGGCAGCTGTCGGGGTGCTACCAGTGCCACATGGTGGTGGTCCCCGTTAGCGGTAGCGTCTCCATGAGGGCCACCATCTGCCCCTGGCTGGACTGCGGCGATGTGTTCGTCAGGCAGGAGAGCCTCCAGCTCCACCAGTCCATCAGGCACGCAGTGTCAGGGCTTGGCACGATGGCCACGAACGGGCGCGCGCACGACGTCGAGGGCAAAGAGGAGTACGACTCGGTGGCGAGGTTGACCAGGTTGCTAATGTCCCACCAAGACCTAACAGCTCTTCCTTGGTACGACAATAAGGATGCCTTCAACACGTTCTACAACAAGACTGGTTCTAGCAAGCAGGTGGCCAGAGCCATCTTCATCAACCCTGAGCATGGTCTGTACCCCGAGATCTTCCACCTAGAGCAGCTCATCTTAGGGAAGGAGGACACAACTAACAACTTCTCTCGTGGCTACCACACTATTGGAAAGGGAATGGTGCTGGTAGCTAACAACTTTGGTAACGACCTCCTTACTCGCCGCAGTGAGATCAAGCAACCATGGCCTCCACCTCAGGAGTTGGCGTGCTTGGGTTTGAACATCATGGTTGCTGACACATCCGCGCCCGGCGTCCGCATGCCGCGCTGGCCTCCACCTCCACGCCCCCCATCCCCCACCCCCGGTAGGCAGGTACTCTCCTCCAGGACCGTCAGCCATGGCAGAGCTATAGCGGTTGCTCCAGTTGGCCCGCTCAAGCCGCGAAATTCGGGACCCCTTCCCGGCTCCCGCGCCATGGACGGCCTCCCCGACGCCGACGCGGCGCCGTTGGCGGCCGCGCCGCCGCAGAAGCGCGACGAGTGGAGCGAGAGCGGCATCGCGCGCCTGCTCGAGGCCTACGAGGCCAAGTGGCTGCTGCGGAACCGCGCCAAGCTCAAGTGGAGCGACTGGGTCGACATCGCCCGCGAGGTGTCCGTGCATTGCGCCGACGACGCCGCGGCCGCGGGGAAGCCCCCCGGCGGCGTCGGTAGCAGCGCCAAGACCCCCAACCAGTGCAAGAACAAGGTCGAGTCCATGAAGAAGCGCTACCGGGCCGAGACCGCCGCGGTGGCGCGCGCCGGCCCGGCCGCCGCCGGCCCGTCGTGGAGGTTCTTCGCCCGCATGGACGGCCTGCTCAAGGGACCGCCCGTCGGCCCTGACCAGGTGCAGCAGCAGCAGGCGCTGACTAACAGCAGAATAGACTTGCGAGCTCCGGCGAAACCGGAGGCCGAGGCAGAAGCTGACTTTGCCGCGCAGCTGCGGGATGCGGTTCCAGGTGCATTCACTGATCTGATGAACATGGACGCGAATGGCGCCGTCCCGGATAAAGCGGAGAAGGCTGACAACAGCATGCAGAAGGAGAGCGGGCCTGCTGATAGCGATGCCAACGTCAGTTCTCCGAGGAGTAAGGTGGCGAACGAGGACGTGGAGGAGGTGGAGGACAAGGTCTGGGACCGGCCCAAGAAGAGAAAGAGCACAGACTTCGATATAGCCAAGAGCATCGAGCTGCTGGCTAGCTCCTTCTTGAAGGTTGAGCAGGCCAGGATGGAGATGTACAGGGAGACAGAAAGAATGAGGGTTGAGGCTGAGATCAAGAAGGGGGAGATGGAGCTCAAGAGGACTGAGATCATGGCGAAAACACACCTGCAGATCGCTAGGCTTTTCGCGAGGAAGTTGAAGCAGAGCAGTGGAAAGAACGGTGGCAGTTCGTCAGTAACGGCTGAAGTGGACACCCTTACCAAGAAGGGCGAGAATGGTTAG
Protein Sequence:
- >Zm00001eb104640|Zea_mays|Trihelix|Zm00001eb104640
MEGAAVSSLTIALEKQSRLLRAICDRLSAQDAPWASLESATTEHLDAVEAAAATRVGAPESWRPHVELRYEEPVTADNWGGLFEHSGVITAEVGSSPEEVITDDWGDLFCRGVDSDEQLCDSLHSASIRSLEEAFAREDPIPSRADLGIQLSATTERLDAVEAAVATHVDALESWRLRVEARASVHLCGFFDGTDVTKLPTTCSTSGLTTKLAMAHYGSHLPGDKGGSAASWQPVRSLALAVHVESQCQQASSACGTPAMASMGKMSVGDLTEADLKGKHIFVCAEIHEPPDENQNSTNDILSTSCDTAVDQRRTECLGSTGRRLGCQPATPRECMLSVIPGSATAVDVVKRCQRLFPLADSTGAFDATVAARVTQMAVSSPARNTTPTGSSPESTACWFPCDNKSSKQLQRGGPLLDGSDGASFRVGMQLRQLSGCYQCHMVVVPVSGSVSMRATICPWLDCGDVFVRQESLQLHQSIRHAVSGLGTMATNGRAHDVEGKEEYDSVARLTRLLMSHQDLTALPWYDNKDAFNTFYNKTGSSKQVARAIFINPEHGLYPEIFHLEQLILGKEDTTNNFSRGYHTIGKGMVLVANNFGNDLLTRRSEIKQPWPPPQELACLGLNIMVADTSAPGVRMPRWPPPPRPPSPTPGRQVLSSRTVSHGRAIAVAPVGPLKPRNSGPLPGSRAMDGLPDADAAPLAAAPPQKRDEWSESGIARLLEAYEAKWLLRNRAKLKWSDWVDIAREVSVHCADDAAAAGKPPGGVGSSAKTPNQCKNKVESMKKRYRAETAAVARAGPAAAGPSWRFFARMDGLLKGPPVGPDQVQQQQALTNSRIDLRAPAKPEAEAEADFAAQLRDAVPGAFTDLMNMDANGAVPDKAEKADNSMQKESGPADSDANVSSPRSKVANEDVEEVEDKVWDRPKKRKSTDFDIAKSIELLASSFLKVEQARMEMYRETERMRVEAEIKKGEMELKRTEIMAKTHLQIARLFARKLKQSSGKNGGSSSVTAEVDTLTKKGENG