Gene Details:
- MSU gene ID: LOC_Os01g48410
- RAPdb gene ID: Os01g0675000
- Gene Symbol: OsRopGEF6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Instead, OsRopGEF2, OsRopGEF3, OsRopGEF6, and OsRopGEF8 were preferentially expressed in pollen, strongly suggesting their significant roles in pollen germination and tube growth.
Function-related keywords:
Literature:
- Genome-wide analysis of RopGEF gene family to identify genes contributing to pollen tube growth in rice (Oryza sativa) . DOI: 10.1186/s12870-020-2298-5 ; PMID: 32131749
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g48410.1
GCGCGCATGCCCCGTTTTTTGCGTGCGTGTGGTTTCCAACTTTGGCTCGCCCCTCCGGGCGCAAACACCACAACACCTCGCGCCCATGCGAGGACGCAGCCATCCATCCATCCACCCAGCCCCCACACTCCTTCGGCGCGCGCGTCCGTCCTCGATCGCGCGCGCGTCGACGAGCTAAGCCGGCCCGGGAAACCCAAGGCCCCTCTCCCTTCCTCAAGCGCGCCGGCGGGCCTCGCCGGCGCGCGACATTGAGCTCAACCCCCCCGTCGTAGTCGCACGTCGAGCGCCACCACCACCGCCAGCGCGTCGCATCGTACGTCCTCCACGCGCGGCGCCGTGCTAGGCAACCTCCTCTGCTGATCGCCCGCCTCCTCATGAGCGTGTGACCTGCTGTCGAATGGTGCGGCGGCACCTGCTGCGCGGACACAGCCTGGACAGGTTCCTGCCGATCAGGAGCCTCATCATGTCGTCCAGCTCTTCCTTCTCGTCGTCGTCTCCGTCGCCGCCGCCGCCGTCGTCGTCGTCGTCACGGGGAAGCAGCAGCGGCAGGTGGTGCGGCGTCAGCGTGGCCGAGGAGGACGAGGACGATGCCGCCGTCTCCGCGACGACGACCCCGCCACTGCCGCCGCTGCAGAAGCGGGTGCTGTCGAGGAGCCACGGGTCCAAGGCCAAGCCGCTGGGCGGCTCCGTCGACCACCTGCCGCCGGTGGTGCCGCCATCGTCGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAGATTGATCTGGTGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACCGGCAAAGGTGTCTCCTCCGCTCTTGCTCTCTCCAACGCCATCACAAATCTCGCAGCTTCGGTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTCTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCGAAAAAATGGATTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCTGCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAATTTCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTGAAGAGCGGGCGCAAACTGTCCTACTCATCCTCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACAACAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCATATTTCACGGCCTCATTTTGGTTGGAAAATTTTTGCATGAATAGATCAGAAATTCAAAATGTGAAACCGCTAGTATCTGAATAACAGAATGCACACTAGCATATTTTCCTTCGGAATACA
CDS Sequence
- >LOC_Os01g48410.1
ATGGTGCGGCGGCACCTGCTGCGCGGACACAGCCTGGACAGGTTCCTGCCGATCAGGAGCCTCATCATGTCGTCCAGCTCTTCCTTCTCGTCGTCGTCTCCGTCGCCGCCGCCGCCGTCGTCGTCGTCGTCACGGGGAAGCAGCAGCGGCAGGTGGTGCGGCGTCAGCGTGGCCGAGGAGGACGAGGACGATGCCGCCGTCTCCGCGACGACGACCCCGCCACTGCCGCCGCTGCAGAAGCGGGTGCTGTCGAGGAGCCACGGGTCCAAGGCCAAGCCGCTGGGCGGCTCCGTCGACCACCTGCCGCCGGTGGTGCCGCCATCGTCGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAGATTGATCTGGTGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACCGGCAAAGGTGTCTCCTCCGCTCTTGCTCTCTCCAACGCCATCACAAATCTCGCAGCTTCGGTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTCTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCGAAAAAATGGATTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCTGCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAATTTCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTGAAGAGCGGGCGCAAACTGTCCTACTCATCCTCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACAACAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAG
Protein Sequence
- >LOC_Os01g48410.1
MVRRHLLRGHSLDRFLPIRSLIMSSSSSFSSSSPSPPPPSSSSSRGSSSGRWCGVSVAEEDEDDAAVSATTTPPLPPLQKRVLSRSHGSKAKPLGGSVDHLPPVVPPSSKNVRDSGPPSEIDLVKEKFAKLLLGEDMSGTGKGVSSALALSNAITNLAASVFGEQRRLEPMSADRRARWNKEIDWLLSVTDHIVEFVPSQQASTDGTSMEVMGTQQRRDLLINIPALRKLDAMLLEYLDNFKDEQEFWYVKKDADEGEKGDAPRQGDKWWIPTVRVPPEGLPDASKKWILHQKDLVGQVLKAAMAINADVLTEMEIPGEYIETLPKNGRSSLGDSIYKIITDDHFDPNELLSSVDLSTEHKIVDLKDRIEASVVIWQRKISNKLSWGPGVSLEKREQFEERAQTVLLILKHQFPGVPQSSLDISKIQYNKDVGYAILESYSRTLESLAFAVLSRIEDVLHADAIARDPKRTKSRRRPSLVDIPEIIDNALEEEETVNSIDANSQVTNNSIHWQEQEHEDKGARLRKVHRMVTKKLLHIEKVDNLGGGLKSFSHR*