Gene Details:
- Gene ID: BnaC07g42660D
- Gene Symbol: BnaCCRL
- Gene Name: BnaC07.CCR-LIKE
- Genome: Brassica_napus_v4.1
- Species: Brassica napus
Functional Descriptions:
- BnaCCRL may control SCC directly by lignin synthesis to thicken seed coat, leading to a negative effect on SOC in B. napus.
- Disruption of BnaTT8 or BnaCCRL confers lower SCC, lignin content, and higher SOC in B. napus.
- BnaCCRL represents a novel identified gene involved in seed coat development. Furthermore, we also predict the key genes regulating carbon allocation between phenylpropane compounds and oil during seed development in B. napus.
- We further experimentally validate that BnaCCRL and BnaTT8 positively regulate seed coat content and lignin content. BnaCCRL represents a novel identified gene involved in seed coat development. Furthermore, we also predict the key genes regulating carbon allocation between phenylpropane compounds and oil during seed development in B. napus.
Function-related keywords:
- development , seed , seed-development , lignin , oil-content
Literature:
- Multi-omics analysis dissects the genetic architecture of seed coat content in Brassica napus. DOI: 10.1186/s13059-022-02647-5 ; PMID: 35346318
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >BnaC07g42660D
GCAACAGAAAATAGTTCACCCAACTTTCTCCTATTAATATGCTTCTATCTTCTTTTCTCTTCCTACTTCTAACCTTCTCTTCTTCCACACACATAAATACAGACACGCTTTTGATAATATAGAACAAGAACAAGAACAAGAACAAGAAAATTATGGATCAAGAAAAGTCTCATTCCTGCTGCTGCGTTCTTGATGCTTCCACTTATGTGGGCTTCTGGATTCTCAAGAAGTTGCTTAGCAGAGGATACTCTGTTCACGCAGCTATTCGTAAAAACGGAGATAGTGAAATTGAGGAGACAATCCGAGAGATGGAAGCAACAGAGGAGAGATTAGTTGTGTACGATGTTGATGTGTTGGATTATCAAAGCATACTTGTCTCTCTCAAGACATGTAACGCTGTCTTCTGCTGCTTAGATAGCCCTGAAGGATACGATGAGAAGGAAGTGGATTTGGAGGTGAGAGGAGCTATCAATGTGGTGGAAGCATGTGGAAGAACAGAGAGCATAGAGAAGATTGTATTCTCTTCTTCTTTAACAGCTTCAATTTGGAGAGACAACATTGGCACTCAGAAGGATGTTGATGAGAAGTGTTGGAGTGATCAAGACTTCTGTCGCAACAAAAAGTTGTGGCACGCATTGGCAAAGATGTTGTCCGAGAAAGCAGCTTGGGCACTAGCCATGGACCGTAGGCTCAACATGGTCTCTATCAATCCTGGTCTTATCGTTGGACCATCGGTTGCACAATATAACCCTAGGCCCACCATGTCCTACCTCAAAGGAGCTGCACAAATGTATGAGAATGGAGTGTTGGCGTACGTAGACGTTAAATTTTTAGCGGATGTTCATATTAGAGCATACGAGGATGTTTCAGCTTGTGGTCGATATTTCTGCTTCAACCAAATCGTTAACACAGAAGAAGAAGCTCTCAAGCTTGTCGAGAGTTTGTCTCCTTTGATACCTATGCCACCGAGGTATGAGAGTGTAATGCAAGGAAGCGAAGTTTACGAAGAAAGACTGAGGAACAATAAATTGAGCAAGCTGGTGGAAGCTGGCTCTGCTTGTTAAACAAATATTTAAATTGAAGATGAGGAGCTTATACAAGAAATTAAAGGGTCATAGTTTGTATACTAAGCTTCTCAATTCATACTTCATAGTAGCATGTGTTCTCGTGAACTATTTATTTATAAAAATCATATTTCATGTGATT
CDS Sequence
- >BnaC07g42660D
ATGGATCAAGAAAAGTCTCATTCCTGCTGCTGCGTTCTTGATGCTTCCACTTATGTGGGCTTCTGGATTCTCAAGAAGTTGCTTAGCAGAGGATACTCTGTTCACGCAGCTATTCGTAAAAACGGAGATAGTGAAATTGAGGAGACAATCCGAGAGATGGAAGCAACAGAGGAGAGATTAGTTGTGTACGATGTTGATGTGTTGGATTATCAAAGCATACTTGTCTCTCTCAAGACATGTAACGCTGTCTTCTGCTGCTTAGATAGCCCTGAAGGATACGATGAGAAGGAAGTGGATTTGGAGGTGAGAGGAGCTATCAATGTGGTGGAAGCATGTGGAAGAACAGAGAGCATAGAGAAGATTGTATTCTCTTCTTCTTTAACAGCTTCAATTTGGAGAGACAACATTGGCACTCAGAAGGATGTTGATGAGAAGTGTTGGAGTGATCAAGACTTCTGTCGCAACAAAAAGTTGTGGCACGCATTGGCAAAGATGTTGTCCGAGAAAGCAGCTTGGGCACTAGCCATGGACCGTAGGCTCAACATGGTCTCTATCAATCCTGGTCTTATCGTTGGACCATCGGTTGCACAATATAACCCTAGGCCCACCATGTCCTACCTCAAAGGAGCTGCACAAATGTATGAGAATGGAGTGTTGGCGTACGTAGACGTTAAATTTTTAGCGGATGTTCATATTAGAGCATACGAGGATGTTTCAGCTTGTGGTCGATATTTCTGCTTCAACCAAATCGTTAACACAGAAGAAGAAGCTCTCAAGCTTGTCGAGAGTTTGTCTCCTTTGATACCTATGCCACCGAGGTATGAGAGTGTAATGCAAGGAAGCGAAGTTTACGAAGAAAGACTGAGGAACAATAAATTGAGCAAGCTGGTGGAAGCTGGCTCTGCTTGTTAA
Protein Sequence
- >BnaC07g42660D
MDQEKSHSCCCVLDASTYVGFWILKKLLSRGYSVHAAIRKNGDSEIEETIREMEATEERLVVYDVDVLDYQSILVSLKTCNAVFCCLDSPEGYDEKEVDLEVRGAINVVEACGRTESIEKIVFSSSLTASIWRDNIGTQKDVDEKCWSDQDFCRNKKLWHALAKMLSEKAAWALAMDRRLNMVSINPGLIVGPSVAQYNPRPTMSYLKGAAQMYENGVLAYVDVKFLADVHIRAYEDVSACGRYFCFNQIVNTEEEALKLVESLSPLIPMPPRYESVMQGSEVYEERLRNNKLSKLVEAGSAC