Information report for OsCCR14
Gene Details
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Functional Descriptions
- SCF OsFBK1 E3 ligase mediates jasmonic acid induced turn-over of OsATL53 and OsCCR14 to regulate rice anther and root lignification.
- SCF OsFBK1 mediates turn-over of OsATL53 in cytoplasm and nucleus, while of OsCCR14 in the nucleus as validated by cell-free degradation assays.
- Currently, we have identified OsATL53, a member of ATL family of RING-H2 proteins interacting with OsCCR14 in cytoplasm.
- Biochemically, OsATL53 decreases enzymatic activity of OsCCR14 and sequesters it in the cytoplasm thereby regulating the lignification process.
- Knock-down rice transgenics of OsATL53 display increased lignin deposition in the anthers and roots vis-a-vis wild-type, while those of OsCCR14 have decreased lignin content.
Literature and News
Gene Resources
- UniProt: Q6Z9E7
- EMBL: AK072872, AK105802, AK105870
- AlphaFoldDB: Q6Z9E7
- EnsemblPlants: Os08t0441500-01
- Gramene: Os08t0441500-01
- KEGG: osa:4345689
- Orthologous matrix: KPECTGQ
- InterPro: IPR001509, IPR036291, IPR050425
- PANTHER: PTHR10366, PTHR10366:SF404
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- OrthoDB: Q6Z9E7
- SWISS-MODEL: Q6Z9E7
- Conserved Domain Database: cd08958
- eggNOG: KOG1502
Homologs
- Brassica napus: BnaCCRL
- Daucus carota: DCAR_019459
- Fragaria vesca: FvH4_7g01580
- Malus domestica: MDP0000265073, MD11G1063800, MDP0000320006
- Zea mays: Hm2, Hm1
Sequences
cDNA Sequence
- >LOC_Os08g34280.1
CAGAAGAATCCCAGCTACCAAATCGAACCTACCAACTCATTCCCGATCGATCGATCTTAAAAAAAAACTAATCGTAACTTTTCTCTCTCTCTCCTATCTTTAGAACTAGCAGGTAGCAACTGCTTCGAGTGTAGTCTGGTGAACGTACGATCTTTCGTTCGTTCATCAAGATGACCGTGATCGACGGCGCCGTCGCTGCCGACGCCGGCGGCGCAGCCGCGGCGGTGGTGCAGCCGGGGAACGGGCAGACCGTGTGCGTGACCGGCGCGGCCGGGTACATCGCGTCGTGGCTCGTGAAGCTGCTGCTTGAGAAGGGCTACACTGTCAAGGGCACCGTCAGGAACCCAGATGACCCGAAGAACGCGCACCTGAAGGCGCTCGACGGCGCCGGCGAGCGGCTGGTGCTCTGCAAGGCCGACCTCCTCGACTACGACGCCATCTGCCGCGCCGTCGCCGGCTGCCACGGCGTCTTCCACACCGCCTCCCCCGTCACCGACGACCCCGAGCAGATGGTGGAGCCGGCGGTGAGGGGGACGGAGTACGTGATAAACGCGGCGGCGGAGGCCGGCACGGTGCGGCGGGTGGTGTTCACGTCGTCGATCGGGGCGGTGACCATGGACCCCAACCGCGGGCCCGACGTCGTCGTCGACGAGTCCTGCTGGAGCGACCTTGACTACTGCAAGGAAACCAGGAACTGGTACTGCTACGGGAAGGCGGTGGCGGAGCAGGCGGCGTGGGAGGCGGCGCGGCGGCGAGGGGTGGAGCTGGTGGTGGTGAACCCGGTGCTGGTGATCGGGCCGCTGCTGCAGCCGACGGTGAACGCCAGCGTCGCCCACATCCTCAAGTACCTGGACGGCTCGGCCAGCAAGTTCGCCAACGCCGTCCAGGCCTACGTCGACGTCCGCGACGTCGCCGCCGCCCACCTCCTCGTCTTCGAGTCCCCTTCCGCCGCCGGCCGCTTCCTCTGCGCCGAGTCTGTCCTCCACCGCGAGGGTGTCGTCCGCATCCTCGCCAAGCTCTTCCCCGAGTACCCTGTCCCCACCAGGTGCTCCGACGAGAAGAACCCCAGGAAGCAGCCGTACAAGATGTCGAACCAGAAGCTCCGGGACCTGGGGCTGGAGTTCCGGCCGGCGAGCCAGTCGCTGTACGAGACGGTGAAGTGCCTCCAGGAGAAGGGCCACCTGCCGGTGCTCGCCGCCGAGAAGACGGAGGAGGAGGCCGGCGAGGTCCAGGGCGGGATTGCCATCCGAGCATGAGGAAAACAGCAGAGCAAAAGAGCAGGAAAAATGTCCATATCGTGTTAGTGTTTACCGTGCTGTAAAACCAAAGTAGTAGTGTTCGCTGGTTTGTCTGGTCTGAAGCCCTGTAATACACCCCTGTTGTTGTTACATGTGCACCAGAGTGACCGAATAAGTATTTCTATGAAGTTCTCTATGTTCACAACTGATTTGTGCAGAATTTGCTACCAAGACAGCAGGTTGTGAAAACCCACACA
CDS Sequence
- >LOC_Os08g34280.1
ATGACCGTGATCGACGGCGCCGTCGCTGCCGACGCCGGCGGCGCAGCCGCGGCGGTGGTGCAGCCGGGGAACGGGCAGACCGTGTGCGTGACCGGCGCGGCCGGGTACATCGCGTCGTGGCTCGTGAAGCTGCTGCTTGAGAAGGGCTACACTGTCAAGGGCACCGTCAGGAACCCAGATGACCCGAAGAACGCGCACCTGAAGGCGCTCGACGGCGCCGGCGAGCGGCTGGTGCTCTGCAAGGCCGACCTCCTCGACTACGACGCCATCTGCCGCGCCGTCGCCGGCTGCCACGGCGTCTTCCACACCGCCTCCCCCGTCACCGACGACCCCGAGCAGATGGTGGAGCCGGCGGTGAGGGGGACGGAGTACGTGATAAACGCGGCGGCGGAGGCCGGCACGGTGCGGCGGGTGGTGTTCACGTCGTCGATCGGGGCGGTGACCATGGACCCCAACCGCGGGCCCGACGTCGTCGTCGACGAGTCCTGCTGGAGCGACCTTGACTACTGCAAGGAAACCAGGAACTGGTACTGCTACGGGAAGGCGGTGGCGGAGCAGGCGGCGTGGGAGGCGGCGCGGCGGCGAGGGGTGGAGCTGGTGGTGGTGAACCCGGTGCTGGTGATCGGGCCGCTGCTGCAGCCGACGGTGAACGCCAGCGTCGCCCACATCCTCAAGTACCTGGACGGCTCGGCCAGCAAGTTCGCCAACGCCGTCCAGGCCTACGTCGACGTCCGCGACGTCGCCGCCGCCCACCTCCTCGTCTTCGAGTCCCCTTCCGCCGCCGGCCGCTTCCTCTGCGCCGAGTCTGTCCTCCACCGCGAGGGTGTCGTCCGCATCCTCGCCAAGCTCTTCCCCGAGTACCCTGTCCCCACCAGGTGCTCCGACGAGAAGAACCCCAGGAAGCAGCCGTACAAGATGTCGAACCAGAAGCTCCGGGACCTGGGGCTGGAGTTCCGGCCGGCGAGCCAGTCGCTGTACGAGACGGTGAAGTGCCTCCAGGAGAAGGGCCACCTGCCGGTGCTCGCCGCCGAGAAGACGGAGGAGGAGGCCGGCGAGGTCCAGGGCGGGATTGCCATCCGAGCATGA
Protein Sequence
- >LOC_Os08g34280.1
MTVIDGAVAADAGGAAAAVVQPGNGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAGERLVLCKADLLDYDAICRAVAGCHGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLDYCKETRNWYCYGKAVAEQAAWEAARRRGVELVVVNPVLVIGPLLQPTVNASVAHILKYLDGSASKFANAVQAYVDVRDVAAAHLLVFESPSAAGRFLCAESVLHREGVVRILAKLFPEYPVPTRCSDEKNPRKQPYKMSNQKLRDLGLEFRPASQSLYETVKCLQEKGHLPVLAAEKTEEEAGEVQGGIAIRA*