Information report for AT3G24620
Gene Details
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Functional Descriptions
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- flower , pollen , pollen , pollen tube cell , pollen
Literature and News
- A new family of RhoGEFs activates the Rop molecular switch in plants. DOI: 10.1038/nature03883 ; PMID: 15980860
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Purification and crystallization of the catalytic PRONE domain of RopGEF8 and its complex with Rop4 from Arabidopsis thaliana. DOI: 10.1107/S1744309106018689 ; PMID: 16754995
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- ROPGEF1 and ROPGEF4 are functional regulators of ROP11 GTPase in ABA-mediated stomatal closure in Arabidopsis. DOI: 10.1016/j.febslet.2012.03.040 ; PMID: 22500990
- Arabidopsis PRK6 interacts specifically with AtRopGEF8/12 and induces depolarized growth of pollen tubes when overexpressed. DOI: 10.1007/s11427-016-9107-3 ; PMID: 28795376
- Kinase partner protein interacts with the LePRK1 and LePRK2 receptor kinases and plays a role in polarized pollen tube growth. DOI: 10.1111/j.1365-313X.2005.02388.x ; PMID: 15860008
- Members of a novel class of Arabidopsis Rho guanine nucleotide exchange factors control Rho GTPase-dependent polar growth. DOI: 10.1105/tpc.105.036434 ; PMID: 16415208
- Structural evidence for a common intermediate in small G protein-GEF reactions. DOI: 10.1016/j.molcel.2006.11.023 ; PMID: 17218277
Gene Resources
Homologs
- Capsicum annuum T459_01939
- Oryza sativa OsRopGEF6, OsRacGEF1;OsRopGEF7B, OsRopGEF10;BGL, OsRacGEF2
- Setaria italica Seita.5G061700
- Zea mays GRMZM2G021475_P01
Sequences
cDNA Sequence
- >AT3G24620.1
ATGCTTTTAACAAAAATCTTAGAGTTGTATCATCTTTAGATCAACTGGATTTTAAAGGAATAAAGGGCTTTAACTTGCGGGGCAAGAAAACAAGCGAACGTTGTCGTACCATGGTTGCAGCGTTGGAACGAGGACTAAGCGCTTCCAAATCATTCAACTTTAAAAGAATGTTTGATTCATCTTCGACGAAACAACAACAATCTCAAACTATTGTCGTGGAGAACGGAGATTCTCATATTGTCGAATCCAACACGCCTGAAAGCCAAAACTCCGACAGCTTCGTAGAAAGCCCCGTAGAGAGCAGCCTTCCAATGATTTCCCCTCTTACTCGGCCAGGAAAAAGATCTGAGAGACAACAAGCAGATATGGAGATGATGAAAGACAGGTTCGCTAAATTGCTTCTTGGAGAAGATATGTCCGGTGGTGGGAAAGGCGTATCTTCTGCTCTGGCTCTTTCCAATGCCATCACAAATCTTGCTGCGTCTATATTCGGAGAACAAACAAAGCTACAACCGATGCCGCAAGATAGACAAGCGAGATGGAAGAAAGAGATTGATTGGTTATTATCCGTGACCGATCACATTGTCGAGTTTGTTCCTTCTCAACAAACAAGCAAAGATGGAGTTTGCACTGAGATTATGGTGACAAGACAAAGAGGTGATCTTCTTATGAACATTCCAGCTCTTCGAAAACTTGACGCCATGCTCATCGATACATTGGACAATTTCAGAGGACACAACGAGTTTTGGTATGTCTCAAGAGATTCAGAAGAAGGGCAGCAAGCAAGGAATGATCGGACAAACGACAAGTGGTGGCTACCACCGGTTAAAGTTCCTCCTGGAGGTTTATCAGAACCATCTCGGAGAATGCTTTACTTCCAAAAAGATTCAGTCACACAAGTTCAAAAAGCTGCAATGGCCATCAATGCTCAAGTCCTCTCAGAAATGGAAATACCTGAGAGCTACATCGACTCTCTCCCAAAGAACGGAAGAGCCAGCCTCGGGGATTCGATATACAAGAGCATAACAGAGGAATGGTTTGATCCTGAGCAGTTCTTAGCGATGTTGGACATGTCGACAGAGCACAAAGTGTTGGATTTGAAGAACAGAATTGAGGCATCTGTTGTGATTTGGAAGAGGAAGCTTCACACAAAGGACACCAAATCTTCGTGGGGCTCAGCAGTTAGCTTGGAGAAGAGAGAATTGTTCGAAGAGAGAGCAGAAACAATCTTGGTCTTGCTCAAACAAAAATTTCCCGGTCTTCCTCAATCTTCCCTTGACATCTCCAAGATTCAGTTTAACAAGGACGTTGGGCAAGCGGTGTTGGAAAGTTACTCTAGGATACTTGAGAGCTTGGCTTACACAGTGATGTCAAGGATAGAAGATGTTCTTTACACAGATACATTGGCACTAAAGCAAACTTTATTGGCTGAAGAAACATCAGATGGTGGGAGAACAACAGAGACGGATTCCGAGTCAGCGGGATCTTCTAACTCGGGAGAAGAAGCCGAGAAGCATGACCCACACTCCAAGACCTTGTTGGATTTTATGGGTTGGAATGATAATAGTTCCAAAGGAGGCGATAAACCTACTAAATCTCCAAACCTTACGCCGAAAAAGCTCTCATACTTGGAGAAGTTAGAGAATTTAAACGGTTTTAGAAGTCCCAAAGATAGGCATTAATCATGAAAATCCTTGTGAGATACTTTTATAGAGAACATAAAAGTGTAGATAGGGAAAAAGGAATGAAAGCAAAGTAGTAAATGAAGTAATCACACCCTCTTCCTTCCTCGGATAGAGAAGTCTTTAGCTTAAGGAGTTTTTAACTCTTAACAAGAAGATAACTATCTCAAATGTACATGTTATAATCTTTAAATGTTCTCTTTGTTTTTCTTGACTTTCAAAAATAGAGGATATTTAATACGTTTAACTATGTGTATCAAATTATCAAACAATATGCGTATGGTCCAAACTCCAA
CDS Sequence
- >AT3G24620.1
ATGGTTGCAGCGTTGGAACGAGGACTAAGCGCTTCCAAATCATTCAACTTTAAAAGAATGTTTGATTCATCTTCGACGAAACAACAACAATCTCAAACTATTGTCGTGGAGAACGGAGATTCTCATATTGTCGAATCCAACACGCCTGAAAGCCAAAACTCCGACAGCTTCGTAGAAAGCCCCGTAGAGAGCAGCCTTCCAATGATTTCCCCTCTTACTCGGCCAGGAAAAAGATCTGAGAGACAACAAGCAGATATGGAGATGATGAAAGACAGGTTCGCTAAATTGCTTCTTGGAGAAGATATGTCCGGTGGTGGGAAAGGCGTATCTTCTGCTCTGGCTCTTTCCAATGCCATCACAAATCTTGCTGCGTCTATATTCGGAGAACAAACAAAGCTACAACCGATGCCGCAAGATAGACAAGCGAGATGGAAGAAAGAGATTGATTGGTTATTATCCGTGACCGATCACATTGTCGAGTTTGTTCCTTCTCAACAAACAAGCAAAGATGGAGTTTGCACTGAGATTATGGTGACAAGACAAAGAGGTGATCTTCTTATGAACATTCCAGCTCTTCGAAAACTTGACGCCATGCTCATCGATACATTGGACAATTTCAGAGGACACAACGAGTTTTGGTATGTCTCAAGAGATTCAGAAGAAGGGCAGCAAGCAAGGAATGATCGGACAAACGACAAGTGGTGGCTACCACCGGTTAAAGTTCCTCCTGGAGGTTTATCAGAACCATCTCGGAGAATGCTTTACTTCCAAAAAGATTCAGTCACACAAGTTCAAAAAGCTGCAATGGCCATCAATGCTCAAGTCCTCTCAGAAATGGAAATACCTGAGAGCTACATCGACTCTCTCCCAAAGAACGGAAGAGCCAGCCTCGGGGATTCGATATACAAGAGCATAACAGAGGAATGGTTTGATCCTGAGCAGTTCTTAGCGATGTTGGACATGTCGACAGAGCACAAAGTGTTGGATTTGAAGAACAGAATTGAGGCATCTGTTGTGATTTGGAAGAGGAAGCTTCACACAAAGGACACCAAATCTTCGTGGGGCTCAGCAGTTAGCTTGGAGAAGAGAGAATTGTTCGAAGAGAGAGCAGAAACAATCTTGGTCTTGCTCAAACAAAAATTTCCCGGTCTTCCTCAATCTTCCCTTGACATCTCCAAGATTCAGTTTAACAAGGACGTTGGGCAAGCGGTGTTGGAAAGTTACTCTAGGATACTTGAGAGCTTGGCTTACACAGTGATGTCAAGGATAGAAGATGTTCTTTACACAGATACATTGGCACTAAAGCAAACTTTATTGGCTGAAGAAACATCAGATGGTGGGAGAACAACAGAGACGGATTCCGAGTCAGCGGGATCTTCTAACTCGGGAGAAGAAGCCGAGAAGCATGACCCACACTCCAAGACCTTGTTGGATTTTATGGGTTGGAATGATAATAGTTCCAAAGGAGGCGATAAACCTACTAAATCTCCAAACCTTACGCCGAAAAAGCTCTCATACTTGGAGAAGTTAGAGAATTTAAACGGTTTTAGAAGTCCCAAAGATAGGCATTAA
Protein Sequence
- >AT3G24620.1
MVAALERGLSASKSFNFKRMFDSSSTKQQQSQTIVVENGDSHIVESNTPESQNSDSFVESPVESSLPMISPLTRPGKRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTLLAEETSDGGRTTETDSESAGSSNSGEEAEKHDPHSKTLLDFMGWNDNSSKGGDKPTKSPNLTPKKLSYLEKLENLNGFRSPKDRH