Gene Details:
- Gene ID: AT3G16130
- Gene Symbol: ATROPGEF13, PIRF2, ROPGEF13
- Gene Name: phytochrome interacting RopGEF 2, ROP (rho of plants) guanine nucleotide exchange factor 13
- Description: RHO guanyl-nucleotide exchange factor 13;(source:Araport11)
- TAIR Accession: locus:2093467
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0005085 — enables — guanyl-nucleotide exchange factor activity
- GO:0005886 — is active in — plasma membrane
Function-related keywords:
Literature:
- Kinase partner protein interacts with the LePRK1 and LePRK2 receptor kinases and plays a role in polarized pollen tube growth. DOI: 10.1111/j.1365-313X.2005.02388.x ; PMID: 15860008
- A new family of RhoGEFs activates the Rop molecular switch in plants. DOI: 10.1038/nature03883 ; PMID: 15980860
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data. DOI: 10.1021/pr100249c ; PMID: 20687615
- Kinase partner protein interacts with the LePRK1 and LePRK2 receptor kinases and plays a role in polarized pollen tube growth. DOI: 10.1111/j.1365-313X.2005.02388.x ; PMID: 15860008
- Members of a novel class of Arabidopsis Rho guanine nucleotide exchange factors control Rho GTPase-dependent polar growth. DOI: 10.1105/tpc.105.036434 ; PMID: 16415208
Sequences:
cDNA Sequence
- >AT3G16130.1
ATGGTGAAAGCGAGTGAGAAAGAACATGAAAAGTACAAGCCGAAATTGTTCGATTTAGAGAACGTGAAGAAGAAGAACTCATCTTCAAGGCATTTCAAGAGATGGAACTCAGATTCCGCCTTGAGAATTGAAGATCCAGACATTGATGATGGCACTGTTTTCAAGAAAACCGCGACCTCCAGCATCCAGCCAATTCTACCGGTTCTGGCTATGGATGAGCAACCTCAGCCGCGTGAAGCAACTGATGAAGAATCACAGAAAGATTCAGAATTGGAGCAGATGAAAGATAAGTTTGCAAAATTGCTTTTAGGAGAAGACATGTCAGGAGGGAGCAAAGGCGTTTCTTCAGCGTTAGCATTATCAAACGCAATCACAAATCTTGCAGCTTCTGCGTTTGGAGAAATACGGCGTTTAGAGGCAATATCCGAGGATAAAAAAGAACGATGGAGAAGAGAAATCGGATGGCTTCTCTCTGTTACTGATCATATAGTTGAATTCTCTCCAACACACCAAACTAACGAGGATGGATCTTCCATGGAGGTAATGACTACAAAACAAAGAACTGATCTTGTCTCCAACATTCCTTCTCTAAAGAAACTCGATGAAATGCTCCTCGATTGTCTTGATAAATTCAAAGATCAGGATGAGTTTTACTACGTCACACCCGGTTCTCCGGAATCTGAAAACAGTAACTCGACCAGGAACGATGATAAATGGTGGCTTCCGATTGTAAAAGTTCCACCTAAAGGCTTATCAGAAACTTTGAAAAGGTTTTTACTAAGTCAAAGAGAGTGTGTGTGCCAAGTGCTTAATTCCGCAATGGCCATAAACTCTCAAGTTCTTACTGAAATGGAGATCCCTGAGAGCTACATCGACTCACTTCCTAAGAAAGGGAGAGCTAGTCTTGGAGACATGATCTATAGAATGATAACATTAGAGATGTTTGATGCAGAGCAATTTCTTCTTGAAATGGATTTATCATCTGAGCACAAGATTCTTGATTTAAAGAACAAATTCGAAGCTTCGGTTGTTATATGGCAGAGAAAGATAGTGCAAATAGACAACAAGTCATCGTCTCCGTGGAGTACGAATTTGAGTATGGATAAGAGACAACAGTTAGAAGAAAGAGCAGCAACCATTTTGCAACTTATCAAACAAGAATTCCCAGGGATCTCTCAATCCACACTTGACATCAGCAAGATTCAATTCAACAGAGATATAGGGTTAGCTATAGTGGAGAGTTATTCGAGAATTCTTGAAAGCTTGGCTCACACGGTAATGTCAAGAATAGAAGATGTTCTTGAAGCTGATCAGCTAACACAAAACCCTGAGCTCGCGATGTGTAAGATCCATATAGTGAAGGAAACAGAGAGTCCAGAGAAGGAAGAAGAGCCAAATTTTTGTCTTTTAGAAGATAGACCTAAAAAGCAGAAGCCTACCATTTCACTATCTGAGGTAATGCAATGGAATATCGAAACCAATGAACCGAGGAAAGAAAAGAGCGACAAGAAACTTTTAACCAGAGTGTCAAGCATGATCATGTCTAACAACAAGAAGACTACTTATCTTGAATCTCTTGGAACCACAAGAAGTCCAACCGCGGGGCGATACTCTTGAAAAAAAAAATATTTCTTTTGTAAAATTAGGGGAAGAAAAAACGTTTCAAATGTAACAGATAAACAGAATATACATAAAATTACTTAAAAGGGTTTGCAGTATTGAGAAATGTTGATGAGTTTTAGAAGGAAGAAGAGAAAGGTAACATGAATATAGATCAGAGCTTGCCGCGAGGACCGAGCTTAGGCGGCTCCTGAGGACCTCTCTTGATGGGAAGAACTTCGCCGGTAGAGGTAGCGCTGACATAAGTAAGCAAAGAGCC
CDS Sequence
- >AT3G16130.1
ATGGTGAAAGCGAGTGAGAAAGAACATGAAAAGTACAAGCCGAAATTGTTCGATTTAGAGAACGTGAAGAAGAAGAACTCATCTTCAAGGCATTTCAAGAGATGGAACTCAGATTCCGCCTTGAGAATTGAAGATCCAGACATTGATGATGGCACTGTTTTCAAGAAAACCGCGACCTCCAGCATCCAGCCAATTCTACCGGTTCTGGCTATGGATGAGCAACCTCAGCCGCGTGAAGCAACTGATGAAGAATCACAGAAAGATTCAGAATTGGAGCAGATGAAAGATAAGTTTGCAAAATTGCTTTTAGGAGAAGACATGTCAGGAGGGAGCAAAGGCGTTTCTTCAGCGTTAGCATTATCAAACGCAATCACAAATCTTGCAGCTTCTGCGTTTGGAGAAATACGGCGTTTAGAGGCAATATCCGAGGATAAAAAAGAACGATGGAGAAGAGAAATCGGATGGCTTCTCTCTGTTACTGATCATATAGTTGAATTCTCTCCAACACACCAAACTAACGAGGATGGATCTTCCATGGAGGTAATGACTACAAAACAAAGAACTGATCTTGTCTCCAACATTCCTTCTCTAAAGAAACTCGATGAAATGCTCCTCGATTGTCTTGATAAATTCAAAGATCAGGATGAGTTTTACTACGTCACACCCGGTTCTCCGGAATCTGAAAACAGTAACTCGACCAGGAACGATGATAAATGGTGGCTTCCGATTGTAAAAGTTCCACCTAAAGGCTTATCAGAAACTTTGAAAAGGTTTTTACTAAGTCAAAGAGAGTGTGTGTGCCAAGTGCTTAATTCCGCAATGGCCATAAACTCTCAAGTTCTTACTGAAATGGAGATCCCTGAGAGCTACATCGACTCACTTCCTAAGAAAGGGAGAGCTAGTCTTGGAGACATGATCTATAGAATGATAACATTAGAGATGTTTGATGCAGAGCAATTTCTTCTTGAAATGGATTTATCATCTGAGCACAAGATTCTTGATTTAAAGAACAAATTCGAAGCTTCGGTTGTTATATGGCAGAGAAAGATAGTGCAAATAGACAACAAGTCATCGTCTCCGTGGAGTACGAATTTGAGTATGGATAAGAGACAACAGTTAGAAGAAAGAGCAGCAACCATTTTGCAACTTATCAAACAAGAATTCCCAGGGATCTCTCAATCCACACTTGACATCAGCAAGATTCAATTCAACAGAGATATAGGGTTAGCTATAGTGGAGAGTTATTCGAGAATTCTTGAAAGCTTGGCTCACACGGTAATGTCAAGAATAGAAGATGTTCTTGAAGCTGATCAGCTAACACAAAACCCTGAGCTCGCGATGTGTAAGATCCATATAGTGAAGGAAACAGAGAGTCCAGAGAAGGAAGAAGAGCCAAATTTTTGTCTTTTAGAAGATAGACCTAAAAAGCAGAAGCCTACCATTTCACTATCTGAGGTAATGCAATGGAATATCGAAACCAATGAACCGAGGAAAGAAAAGAGCGACAAGAAACTTTTAACCAGAGTGTCAAGCATGATCATGTCTAACAACAAGAAGACTACTTATCTTGAATCTCTTGGAACCACAAGAAGTCCAACCGCGGGGCGATACTCTTGA
Protein Sequence
- >AT3G16130.1
MVKASEKEHEKYKPKLFDLENVKKKNSSSRHFKRWNSDSALRIEDPDIDDGTVFKKTATSSIQPILPVLAMDEQPQPREATDEESQKDSELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVMTTKQRTDLVSNIPSLKKLDEMLLDCLDKFKDQDEFYYVTPGSPESENSNSTRNDDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMITLEMFDAEQFLLEMDLSSEHKILDLKNKFEASVVIWQRKIVQIDNKSSSPWSTNLSMDKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFNRDIGLAIVESYSRILESLAHTVMSRIEDVLEADQLTQNPELAMCKIHIVKETESPEKEEEPNFCLLEDRPKKQKPTISLSEVMQWNIETNEPRKEKSDKKLLTRVSSMIMSNNKKTTYLESLGTTRSPTAGRYS