Gene Details:
- Gene ID: Zm00001eb203950
- Gene Symbol: ZmVPS29 vps29
- Gene Name: vacuolar protein sorting29
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmVPS29 increased auxin accumulation during early kernel development by enhancing auxin biosynthesis and transport and reducing auxin degradation and thereby improved kernel development.
- Overexpression of ZmVPS29 conferred a slender kernel morphology and increased the yield per plant in different maize genetic backgrounds.
- ZmVPS29 might play a role in the maintenance of auxin homeostasis in vivo by regulating auxin accumulation in maize kernel development through a combination of auxin biosynthesis, transport and degradation.
- Positional cloning and transgenic analysis revealed that qKM4.08 encodes ZmVPS29, a retromer complex component.
- Further study showed that ZmVPS29 increased auxin accumulation during early kernel development by enhancing auxin biosynthesis and transport and reducing auxin degradation and thereby improved kernel development.
- Sequence analyses suggest that ZmVPS29 has been under purifying selection during maize domestication and likely in breeding processes as well.
Function-related keywords:
- development , auxin , plant-development , domestication , yield , homeostasis , breeding , auxin-biosynthesis , auxin-transport , as-transport
Literature:
- The retromer protein ZmVPS29 regulates maize kernel morphology likely through an auxin-dependent process(es). DOI: 10.1111/pbi.13267 ; PMID: 31553822
- Synthesis and regulation of auxin and abscisic acid in maize. DOI: 10.1080/15592324.2021.1891756 ; PMID: 34057034
- Molecular mechanisms controlling grain size and weight and their biotechnological breeding applications in maize and other cereal crops. DOI: 10.1016/j.jare.2023.09.016 ; PMID: 37739122
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Zm00001eb203950_T001
GTCATGAGCCCAATGCGGGGCCACTTCGTCGTTTTTGACAAGTAGACCCACAGTGGCCCCACGTGCTTGCCCCTCCCTTTCTCTTCTCCCCTTGTGTCGCGCTCGCGCATCTGAAGCAAGGGGGGGAAGGGCCAAGGGGGATCGGTCTTGTTCTCGGAGAGGGTTGAGCTGCTTGACGGTTTTGACTCGGATCATGGTGTGCAGCTCTATCAGATAGAGAGCTGACGTGAGGTGTGAGACGCGGATCGTGGAGTACTACTCAGTAGGAGATCAAGAGGAAGGAGGTGGGGAGGGGGAAGAAGGCGATAGCCGGGGAGGATGGTGCTTGTGCTTGCGCTGGGGGATCTGCACATCCCGCACCGGGCGCCCGACCTCCCCGCCAAATTCAAGTCCATGCTCGTGCCCGGCAAGATCCAACACATCATCTGCACTGGCAATCTCTGCATCAAGGAAGTCCATGACTACCTGAAAAGCCTTTGCCCTGATCTCCATATTACCAGAGGTGAACATGATGAGGATGCTCGATACCCAGAGACTAAGACACTTACAATTGGTCAGTTTAAGCTTGGGCTGTGCCATGGCCATCAGGTTGTTCCATGGGGCGACCTGGACTCCCTGGCGATGCTCCAGCGGCAGCTGGACGTGGACATCCTGGTGACCGGGCACACGCACCAGTTCAAGGCATATAAGCACGAGGGAGGCGTGGTGATCAACCCTGGCTCTGCCACGGGCGCCTACAGCAGCATCACTTACGACGTGAACCCAAGCTTTGTGCTGATGGACATCGACGGGCTCCGTGTGGTGGTGTACGTCTACGAGCTGATTGACGGCGAGGTGAAGGTGGACAAAATCGACTTCAAGAAGACTGCGACGATGCACGGCTAGCCCTATCCTTCCACTCCGTGATTGAGTGCAAGACATGTCTAGCTTCTGTTTCTTTTCTTTCAGCTTCTTGATTCAGAGCCTCCTGAACACGCTTTCTACCT
CDS Sequence
- >Zm00001eb203950_T001
ATGGTGCTTGTGCTTGCGCTGGGGGATCTGCACATCCCGCACCGGGCGCCCGACCTCCCCGCCAAATTCAAGTCCATGCTCGTGCCCGGCAAGATCCAACACATCATCTGCACTGGCAATCTCTGCATCAAGGAAGTCCATGACTACCTGAAAAGCCTTTGCCCTGATCTCCATATTACCAGAGGTGAACATGATGAGGATGCTCGATACCCAGAGACTAAGACACTTACAATTGGTCAGTTTAAGCTTGGGCTGTGCCATGGCCATCAGGTTGTTCCATGGGGCGACCTGGACTCCCTGGCGATGCTCCAGCGGCAGCTGGACGTGGACATCCTGGTGACCGGGCACACGCACCAGTTCAAGGCATATAAGCACGAGGGAGGCGTGGTGATCAACCCTGGCTCTGCCACGGGCGCCTACAGCAGCATCACTTACGACGTGAACCCAAGCTTTGTGCTGATGGACATCGACGGGCTCCGTGTGGTGGTGTACGTCTACGAGCTGATTGACGGCGAGGTGAAGGTGGACAAAATCGACTTCAAGAAGACTGCGACGATGCACGGCTAG
Protein Sequence
- >Zm00001eb203950_P001
MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITRGEHDEDARYPETKTLTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTATMHG
Source: Genetic information comes from the article