Gene Details:
- Gene ID: Zm00001eb060890
- Gene Symbol: ZmTSAH1 ZmIGL
- Gene Name: tryptophan synthase A homolog1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Two candidate genes (ZmbZIP113 and ZmTSAH1) controlling low-temperature germination ability were identified by QTL-seq and integrative transcriptomic analyses.
- ZmTSAH1 diverged from the ancestor of SORBI 3001G056500, indicating that the ZmTSAH1 was more differentiated from the TSAH family members in its degree of differentiation.
- BIFC was used to verify the interaction between ZmTSAH1 and TSB2, and the results show that ZmTSAH1 interacted with TSB2 in Arabidopsis chloroplasts.
- ZmTSAH1 homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase.
- ZmTSAH1 positively regulates low-temperature germination ability (LTGA).
Function-related keywords:
Literature:
- QTL-seq and transcriptomic integrative analyses reveal two positively regulated genes that control the low-temperature germination ability of MTP-maize introgression lines. DOI: 10.1007/s00122-023-04362-6 ; PMID: 37093290
- Horizontal transfer and evolution of the biosynthetic gene cluster for benzoxazinoids in plants. DOI: 10.1016/j.xplc.2022.100320 ; PMID: 35576160
Related News:
Gene Resources:
- NCBI ID: LOC100273163
- UniProt accessions: B4FIR7
Sequences:
cDNA Sequence
- >Zm00001eb060890_T001
AACGAGGGCGAGAGAAAGTTGCTGCCGTTTAGGGGTGGGAGAAAGGGTACCGCTAAGGGCCTACCTTAAACACGCGTAGGGGCGTGGGCTCAGCCTAGAGATGTACAGAAAGCACTGTTGATGGGTGTTGCACTGTTGCTGAAGCTGGCTGGCCTCCTCGTCCCGCTGCTGCTATATATAATCTGTGGCACGGTGGGCATGGCACCAGCATCTCATATCCTACTGCCGGCGTTCCAGAGTTCGAGCTGAGCAGTTGCACACAGCTGCTCGTGAAGCTAGCTAGCGAAGCCACAGGCCCCCAGTGACTTTGCTCCCCCACACCGTAGCGGCCGTATAAACCAGCTCCAACCGATCCATCGAAATCGAACCACAGTACGTGAGCCCGTACTAGAGACATATGGCCTCCGCGATCAAGGCTGCATCGACCTCCTCCCGGTGGTCTTCGTCCCCGGCGGCAGTCCACTCGTCGCCGTTATCGAAGCGGCTACCAGCTGCAGTGGCCATGCCGGGGCGGCGGAGGTCTGTGGCCACTGTAAGGGCGGTCGCCGCGGTAGCTCCGGCTGCCCCGGCGGCGCCGGCCAAGCTCACCGCCGGTGCCGGCGGCCGATGCCTGCCGGTGTCGCAGACCATGTCCAGGCTCAGGGCGCAGGGCAAGACGGCGTTCATCCCGTACATCACCGCCGGCGACCCGGACCTGGCGACGACGGCGGAGGCGCTGCGGCTCCTGGACGCCTGCGGCGCCGACGTCATCGAGCTCGGCGTTCCCTTCTCGGACCCCTACGCCGACGGGCCGGTCATCCAGGCGTCGGCGGCGCGGGCGCGGGCGAGCGGCGCGACGCCGGACGGCGTGCTGGCGATGCTGAAGGAGGTGACGCCGGAGCTGTCCTGCCCCGTGGTGCTCTTCTCCTACTTCAACCCCATCGTGCGGTGGGGCCTGGCCGACTTCGCCGCCGCCGTCAAGGAAGCCGGCGTGCACGGCCTCATAGTTCCCGACCTCCCGTATGGGAACTCGTGTGCTCTCACTCTCAGGACCGAAGCCATCAAGAACAGCCTCGAGCTGGTGCTGCTCACAACACCATCTACGCCAGCGGACAGGATGGGGGAGATAACACGAGCTTCACGAGGATTCGTCTATCTCGCGACCGTCAATGGAGTTACAGGTCCACGCGCAAACGTGAACACACGTGTCCAGTCTCTCATTCAGGAGGTTAAACAGGTCACTGACATACCCGTGGCTGTCGGGTTTGGCATATCGAAACCTGAGCATGTAAAGCAGATTGCAGAGTGGGGTGCAGATGGTGTGATCATTGGTAGCGCAATGGTGAGACAGTTAGGCGAAGCAGCCTCTCCCAAGGAAGGATTGAAGAGGCTAGAGAAATACGCCAGGAGCATGAAGAACGCGCTACCATGCCAGTGAACTAGTCGTATTGACGCGATATAGGCTGTGTTAGCAAGCACGTTGGAGAACAATGTTGCAGAAGTAGCACAATTAATAATGATCCATTCGGCAAGGTTGCTTTTTTACAAATTGCAACAATAAGTTATCAATATAAAATCAACGATTCCTTTGTTTAAAAAAAAGGAAGAAATGTTACATCATTGCATGGTGCTGCGATTCAGTGGTTACTCCATTCATTTTAAATTACAGTTCAGCTCGAGTTTGTCCTGACTCAGCCTTTTTAAAGATTGTCAGTTTGTAACAACAACAACAATAATAATAATAAGTGGCTAGCTCATTAC
CDS Sequence
- >Zm00001eb060890_T001
ATGGCCTCCGCGATCAAGGCTGCATCGACCTCCTCCCGGTGGTCTTCGTCCCCGGCGGCAGTCCACTCGTCGCCGTTATCGAAGCGGCTACCAGCTGCAGTGGCCATGCCGGGGCGGCGGAGGTCTGTGGCCACTGTAAGGGCGGTCGCCGCGGTAGCTCCGGCTGCCCCGGCGGCGCCGGCCAAGCTCACCGCCGGTGCCGGCGGCCGATGCCTGCCGGTGTCGCAGACCATGTCCAGGCTCAGGGCGCAGGGCAAGACGGCGTTCATCCCGTACATCACCGCCGGCGACCCGGACCTGGCGACGACGGCGGAGGCGCTGCGGCTCCTGGACGCCTGCGGCGCCGACGTCATCGAGCTCGGCGTTCCCTTCTCGGACCCCTACGCCGACGGGCCGGTCATCCAGGCGTCGGCGGCGCGGGCGCGGGCGAGCGGCGCGACGCCGGACGGCGTGCTGGCGATGCTGAAGGAGGTGACGCCGGAGCTGTCCTGCCCCGTGGTGCTCTTCTCCTACTTCAACCCCATCGTGCGGTGGGGCCTGGCCGACTTCGCCGCCGCCGTCAAGGAAGCCGGCGTGCACGGCCTCATAGTTCCCGACCTCCCGTATGGGAACTCGTGTGCTCTCACTCTCAGGACCGAAGCCATCAAGAACAGCCTCGAGCTGGTGCTGCTCACAACACCATCTACGCCAGCGGACAGGATGGGGGAGATAACACGAGCTTCACGAGGATTCGTCTATCTCGCGACCGTCAATGGAGTTACAGGTCCACGCGCAAACGTGAACACACGTGTCCAGTCTCTCATTCAGGAGGTTAAACAGGTCACTGACATACCCGTGGCTGTCGGGTTTGGCATATCGAAACCTGAGCATGTAAAGCAGATTGCAGAGTGGGGTGCAGATGGTGTGATCATTGGTAGCGCAATGGTGAGACAGTTAGGCGAAGCAGCCTCTCCCAAGGAAGGATTGAAGAGGCTAGAGAAATACGCCAGGAGCATGAAGAACGCGCTACCATGCCAGTGA
Protein Sequence
- >Zm00001eb060890_P001
MASAIKAASTSSRWSSSPAAVHSSPLSKRLPAAVAMPGRRRSVATVRAVAAVAPAAPAAPAKLTAGAGGRCLPVSQTMSRLRAQGKTAFIPYITAGDPDLATTAEALRLLDACGADVIELGVPFSDPYADGPVIQASAARARASGATPDGVLAMLKEVTPELSCPVVLFSYFNPIVRWGLADFAAAVKEAGVHGLIVPDLPYGNSCALTLRTEAIKNSLELVLLTTPSTPADRMGEITRASRGFVYLATVNGVTGPRANVNTRVQSLIQEVKQVTDIPVAVGFGISKPEHVKQIAEWGADGVIIGSAMVRQLGEAASPKEGLKRLEKYARSMKNALPCQ
Source: Genetic information comes from the article