Gene Details:

Functional Descriptions:

  • Two candidate genes (ZmbZIP113 and ZmTSAH1) controlling low-temperature germination ability were identified by QTL-seq and integrative transcriptomic analyses.
  • ZmTSAH1 diverged from the ancestor of SORBI 3001G056500, indicating that the ZmTSAH1 was more differentiated from the TSAH family members in its degree of differentiation.
  • BIFC was used to verify the interaction between ZmTSAH1 and TSB2, and the results show that ZmTSAH1 interacted with TSB2 in Arabidopsis chloroplasts.
  • ZmTSAH1 homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase.
  • ZmTSAH1 positively regulates low-temperature germination ability (LTGA).

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb060890_T001
    AACGAGGGCGAGAGAAAGTTGCTGCCGTTTAGGGGTGGGAGAAAGGGTACCGCTAAGGGCCTACCTTAAACACGCGTAGGGGCGTGGGCTCAGCCTAGAGATGTACAGAAAGCACTGTTGATGGGTGTTGCACTGTTGCTGAAGCTGGCTGGCCTCCTCGTCCCGCTGCTGCTATATATAATCTGTGGCACGGTGGGCATGGCACCAGCATCTCATATCCTACTGCCGGCGTTCCAGAGTTCGAGCTGAGCAGTTGCACACAGCTGCTCGTGAAGCTAGCTAGCGAAGCCACAGGCCCCCAGTGACTTTGCTCCCCCACACCGTAGCGGCCGTATAAACCAGCTCCAACCGATCCATCGAAATCGAACCACAGTACGTGAGCCCGTACTAGAGACATATGGCCTCCGCGATCAAGGCTGCATCGACCTCCTCCCGGTGGTCTTCGTCCCCGGCGGCAGTCCACTCGTCGCCGTTATCGAAGCGGCTACCAGCTGCAGTGGCCATGCCGGGGCGGCGGAGGTCTGTGGCCACTGTAAGGGCGGTCGCCGCGGTAGCTCCGGCTGCCCCGGCGGCGCCGGCCAAGCTCACCGCCGGTGCCGGCGGCCGATGCCTGCCGGTGTCGCAGACCATGTCCAGGCTCAGGGCGCAGGGCAAGACGGCGTTCATCCCGTACATCACCGCCGGCGACCCGGACCTGGCGACGACGGCGGAGGCGCTGCGGCTCCTGGACGCCTGCGGCGCCGACGTCATCGAGCTCGGCGTTCCCTTCTCGGACCCCTACGCCGACGGGCCGGTCATCCAGGCGTCGGCGGCGCGGGCGCGGGCGAGCGGCGCGACGCCGGACGGCGTGCTGGCGATGCTGAAGGAGGTGACGCCGGAGCTGTCCTGCCCCGTGGTGCTCTTCTCCTACTTCAACCCCATCGTGCGGTGGGGCCTGGCCGACTTCGCCGCCGCCGTCAAGGAAGCCGGCGTGCACGGCCTCATAGTTCCCGACCTCCCGTATGGGAACTCGTGTGCTCTCACTCTCAGGACCGAAGCCATCAAGAACAGCCTCGAGCTGGTGCTGCTCACAACACCATCTACGCCAGCGGACAGGATGGGGGAGATAACACGAGCTTCACGAGGATTCGTCTATCTCGCGACCGTCAATGGAGTTACAGGTCCACGCGCAAACGTGAACACACGTGTCCAGTCTCTCATTCAGGAGGTTAAACAGGTCACTGACATACCCGTGGCTGTCGGGTTTGGCATATCGAAACCTGAGCATGTAAAGCAGATTGCAGAGTGGGGTGCAGATGGTGTGATCATTGGTAGCGCAATGGTGAGACAGTTAGGCGAAGCAGCCTCTCCCAAGGAAGGATTGAAGAGGCTAGAGAAATACGCCAGGAGCATGAAGAACGCGCTACCATGCCAGTGAACTAGTCGTATTGACGCGATATAGGCTGTGTTAGCAAGCACGTTGGAGAACAATGTTGCAGAAGTAGCACAATTAATAATGATCCATTCGGCAAGGTTGCTTTTTTACAAATTGCAACAATAAGTTATCAATATAAAATCAACGATTCCTTTGTTTAAAAAAAAGGAAGAAATGTTACATCATTGCATGGTGCTGCGATTCAGTGGTTACTCCATTCATTTTAAATTACAGTTCAGCTCGAGTTTGTCCTGACTCAGCCTTTTTAAAGATTGTCAGTTTGTAACAACAACAACAATAATAATAATAAGTGGCTAGCTCATTAC
CDS Sequence
  • >Zm00001eb060890_T001
    ATGGCCTCCGCGATCAAGGCTGCATCGACCTCCTCCCGGTGGTCTTCGTCCCCGGCGGCAGTCCACTCGTCGCCGTTATCGAAGCGGCTACCAGCTGCAGTGGCCATGCCGGGGCGGCGGAGGTCTGTGGCCACTGTAAGGGCGGTCGCCGCGGTAGCTCCGGCTGCCCCGGCGGCGCCGGCCAAGCTCACCGCCGGTGCCGGCGGCCGATGCCTGCCGGTGTCGCAGACCATGTCCAGGCTCAGGGCGCAGGGCAAGACGGCGTTCATCCCGTACATCACCGCCGGCGACCCGGACCTGGCGACGACGGCGGAGGCGCTGCGGCTCCTGGACGCCTGCGGCGCCGACGTCATCGAGCTCGGCGTTCCCTTCTCGGACCCCTACGCCGACGGGCCGGTCATCCAGGCGTCGGCGGCGCGGGCGCGGGCGAGCGGCGCGACGCCGGACGGCGTGCTGGCGATGCTGAAGGAGGTGACGCCGGAGCTGTCCTGCCCCGTGGTGCTCTTCTCCTACTTCAACCCCATCGTGCGGTGGGGCCTGGCCGACTTCGCCGCCGCCGTCAAGGAAGCCGGCGTGCACGGCCTCATAGTTCCCGACCTCCCGTATGGGAACTCGTGTGCTCTCACTCTCAGGACCGAAGCCATCAAGAACAGCCTCGAGCTGGTGCTGCTCACAACACCATCTACGCCAGCGGACAGGATGGGGGAGATAACACGAGCTTCACGAGGATTCGTCTATCTCGCGACCGTCAATGGAGTTACAGGTCCACGCGCAAACGTGAACACACGTGTCCAGTCTCTCATTCAGGAGGTTAAACAGGTCACTGACATACCCGTGGCTGTCGGGTTTGGCATATCGAAACCTGAGCATGTAAAGCAGATTGCAGAGTGGGGTGCAGATGGTGTGATCATTGGTAGCGCAATGGTGAGACAGTTAGGCGAAGCAGCCTCTCCCAAGGAAGGATTGAAGAGGCTAGAGAAATACGCCAGGAGCATGAAGAACGCGCTACCATGCCAGTGA
Protein Sequence
  • >Zm00001eb060890_P001
    MASAIKAASTSSRWSSSPAAVHSSPLSKRLPAAVAMPGRRRSVATVRAVAAVAPAAPAAPAKLTAGAGGRCLPVSQTMSRLRAQGKTAFIPYITAGDPDLATTAEALRLLDACGADVIELGVPFSDPYADGPVIQASAARARASGATPDGVLAMLKEVTPELSCPVVLFSYFNPIVRWGLADFAAAVKEAGVHGLIVPDLPYGNSCALTLRTEAIKNSLELVLLTTPSTPADRMGEITRASRGFVYLATVNGVTGPRANVNTRVQSLIQEVKQVTDIPVAVGFGISKPEHVKQIAEWGADGVIIGSAMVRQLGEAASPKEGLKRLEKYARSMKNALPCQ

Source: Genetic information comes from the article