Gene Details:
- Gene ID: Zm00001eb184870
- Gene Symbol: ZmTOC1 toc1
- Gene Name: timing of cab expression1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The expression of another photoperiod gene ZmTOC1 peaked 12 h after dawn on long days and at 10 h after dawn on short days.
- A detailed study of ZmCCA1 and ZmTOC1 confirmed that they are the key components in the maize circadian clock.
- Two maize circadian clock-associated genes, ZmCCA1 and ZmTOC1, which are homologs of the two clock genes in Arabidopsis (AtCCA1 and AtTOC1).
- ZmTOC1, a core component of the circadian clock, is conserved in maize.
- These results suggest that there might be a common mechanism regulating this clock in diverse plant species, and ZmCCA1 and ZmTOC1 may be part of the core components of the central oscillator in maize.
Function-related keywords:
Literature:
- A gene regulatory network model for floral transition of the shoot apex in maize and its dynamic modeling. DOI: 10.1371/journal.pone.0043450 ; PMID: 22912876
- Robust expression and association of ZmCCA1 with circadian rhythms in maize. DOI: 10.1007/s00299-011-1036-8 ; PMID: 21327386
Related News:
Gene Resources:
- NCBI ID: LOC100281433
- UniProt accessions: A0A1D6EBP4 , A0A3L6F921 , E9L0A4
Sequences:
cDNA Sequence
- >Zm00001eb184870_T002
GCTGGCTCTGCATTCTCCCCTCCGGCCCTCCCCTCGTCTTCTCTTCTCTTCTCCCCGCGGAGCGAGCGAGAGAAGCAAGGCCGCTCCGTGCCCCCAACCCCGCTCACTGAGCAAAGCGGAAAAAGCGAGGAAAATATCCTGCTCCAGCGAAGCACCGCAGGCCGCAGCCGCAGCCGCAGCAGAGAAGAGCAGACGCCATCGCCCGCAGCCGCCGCCCCCGGAGAATGGTGCGGGCCGGACCGCGACGGGCGAAGGAGGGCGCCGCGGCCCCCGGCGGCCCCCGCCGCCGCTGATAGTAGTCTACCTGCTGCTAACCAGCCATCTGAAGGCACAGTGGTCGCACGCGAGGGGCCCGGATTGATTGGGTGATAGGCGGCGGGCGCAGATCCACCGACCCCCTCGTCGTGCGCCTGTGTCTCTGGTTCCGGTCCGTGTCCCCTTGGCCGCTTGGTGGAGGCCGGAGGCGTGGTCGGTGCGTTTGGAGTTTGGGTATGGCGGGTGGCGGCGAGGGGGATCGCGTGGGTGTCGGGGGAGCCCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTTCTCTGCGACGGCGACGCCACCAGCTCCCGGGAGGTGCTGCGGCTCCTCTGCAACTGCTCATACCATGTGACCTGCGCCAAGTCTCCGCGGCAGGTGATCAATATCCTCAACTACGAGGGCGGCGAGATCGACATCATCCTGGCTGAGGTCGATCTTCCGGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCCGGAACAAGGACCTGCGTCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTGTCTGTTGTTGTCAAGTGCTTGCGGCTTGGCGCCGCCGAGTACCTGGTGAAGCCGCTGCGCACGAATGAGTTGCTGAACCTTTGGACCCATGTGTGGCGGCGGAGACGGATGCTTGGTTTGCCCGAGAAAAACTTCTTCAATGACAACTTCGAGTTGGTGCTCTCAGAACCTAGCGATGCCAATACCAATAGCACCACCCTCCTCTCAGACGAGACCGACGATAGGCCTAAAGGAAACACGAATCAAGAAACAGGCACCTCAAAGCAACTTGAATACGAGTCTAATCCTTCGGTTGCTGAGCCCGACCAGAGAGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCACCAGCTCATTTGACAGCGAATTACAAAGGGGTGGCAGCCGATTAGATTCCTTGGATAACCAGGGTAATTGCTCTAGCGCAACCGATAGAAGTGACACTGGTACTGATGTAAATATTCGGAGTAAAGAAGCTTTTGAGATGCCTGCGCAGTACCCTATGGTATGGTTTTCTTCCTCTAACATGCATATGGAGCGAAGCAGCGAAGGCCATAATGATACTTCAGGAACTCCACCTGCATACCATTTCCCATTTTATTACCCAGGGATGGTAGAGCACAACATGGCACTTTCGTCGGCGCAAGATTTTCAAGCAAACATAAACAATGCTCAAGCACATACACCGCCAGCGATGCTTCCTCAGTACAATGTTTATCCTCAGTGCCATGGTTTACCTGTGATACCATCATTTCAGTTTAATCCTTCTGGCATGAGTACGCACTCAAGTCATTTACCAACGCAAAATGTGTGGTCATCGGCATCGAGCACACCACCAGTGCCTGAGGAAACATGCAGTCGCTCTGAAAGGAGGGCTGCAGCACTTGCCAAGTTCAGGCTGAAGAGGAAAGAGCGCTGCTTTGACAAGAAGGTGAGGTATGTGAACCGGAAGAAACTCGCTGAAACGAGGCCAAGGGTGCGAGGTCAGTTTGTTAGACAGCCAACCAATACGGATGTCATCAGCATTGGAGATGATATATCTGAAGACGAAGATGACGATCCATCGTCCAGGGAGGTAGATATGGTTTCTTCTCCAGAGTAGTAGTGGAGAGGTCCTCCATGTGAAAAAATAGACTGCAGATGGTTACTGCTCATCTTGTTACAACTCAGTAGACCTAGGCAATACACCCTTTTTGCTCACACACAGTATTACATTTTTGTCCCTAAAACATGTGGCTGTTACCCTGGTTGCTTTAATGAAGAAATCATCTTTGATAAAGTGTAGCTGAAGTTTTGCTAGTTATTGTTGCACAGACCAGTCTAATCAATATGATCTTATGGCAGGATAATCTTTTGAG - >Zm00001eb184870_T001
GCTGGCTCTGCATTCTCCCCTCCGGCCCTCCCCTCGTCTTCTCTTCTCTTCTCCCCGCGGAGCGAGCGAGAGAAGCAAGGCCGCTCCGTGCCCCCAACCCCGCTCACTGAGCAAAGCGGAAAAAGCGAGGAAAATATCCTGCTCCAGCGAAGCACCGCAGGCCGCAGCCGCAGCCGCAGCAGAGAAGAGCAGACGCCATCGCCCGCAGCCGCCGCCCCCGGAGAATGGTGCGGGCCGGACCGCGACGGGCGAAGGAGGGCGCCGCGGCCCCCGGCGGCCCCCGCCGCCGCTGATAGTAGTCTACCTGCTGCTAACCAGCCATCTGAAGGCACAGTGGTCGCACGCGAGGGGCCCGGATTGATTGGGTGATAGGCGGCGGGCGCAGATCCACCGACCCCCTCGTCGTGCGCCTGTGTCTCTGGTTCCGGTCCGTGTCCCCTTGGCCGCTTGGTGGAGGCCGGAGGCGTGGTCGGTGCGTTTGGAGTTTGGGTATGGCGGGTGGCGGCGAGGGGGATCGCGTGGGTGTCGGGGGAGCCCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTTCTCTGCGACGGCGACGCCACCAGCTCCCGGGAGGTGCTGCGGCTCCTCTGCAACTGCTCATACCATGTGACCTGCGCCAAGTCTCCGCGGCAGGTGATCAATATCCTCAACTACGAGGGCGGCGAGATCGACATCATCCTGGCTGAGGTCGATCTTCCGGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCCGGAACAAGGACCTGCGTCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTGTCTGTTGTTGTCAAGTGCTTGCGGCTTGGCGCCGCCGAGTACCTGGTGAAGCCGCTGCGCACGAATGAGTTGCTGAACCTTTGGACCCATGTGTGGCGGCGGAGACGGATGCTTGGTTTGCCCGAGAAAAACTTCTTCAATGACAACTTCGAGTTGGTGCTCTCAGAACCTAGCGATGCCAATACCAATAGCACCACCCTCCTCTCAGACGAGACCGACGATAGGCCTAAAGGAAACACGAATCAAGAAACAGGCACCTCAAAGCAACTTGAATACGAGTCTAATCCTTCGGTTGCTGAGCCCGACCAGAGAGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCACCAGCTCATTTGACAGCGAATTACAAAGGGGTGGCAGCCGATTAGATTCCTTGGATAACCAGGGTAATTGCTCTAGCGCAACCGATAGAAGTGACACTGGTACTGATGTAAATATTCGGAGTAAAGAAGCTTTTGAGATGCCTGCGCAGTACCCTATGGTATGGTTTTCTTCCTCTAACATGCATATGGAGCGAAGCAGCGAAGGCCATAATGATACTTCAGGAACTCCACCTGCATACCATTTCCCATTTTATTACCCAGGGATGGTAGAGCACAACATGGCACTTTCGTCGGCGCAAGATTTTCAAGCAAACATAAACAATGCTCAAGCACATACACCGCCAGCGATGCTTCCTCAGTACAATGTTTATCCTCAGTGCCATGGTTTACCTGTGATACCATCATTTCAGTTTAATCCTTCTGGCATGAGTACGCACTCAAGTCATTTACCAACGCAAAATGTGTGGTCATCGGCATCGAGCACACCACCAGTGCCTGAGGAAACATGCAGTCGCTCTGAAAGGAGGGCTGCAGCACTTGCCAAGTTCAGGCTGAAGAGGAAAGAGCGCTGCTTTGACAAGAAGGTGAGGTATGTGAACCGGAAGAAACTCGCTGAAACGAGGCCAAGGGTGCGAGGTCAGTTTGTTAGACAGCCAACCAATACGGATGTCATCAGCATTGGAGATGATATATCTGAAGACGAAGATGACGATCCATCGTCCAGGGAGGTAGATATGGTTTCTTCTCCAGAGTAGTAGTGGAGAGGTCCTCCATGTGAAAAAATAGACTGCAGATGGTTACTGCTCATCTTGTTACAACTCAGTAGACCTAGGCAATACACCCTTTTTGCTCACACACAGTATTACATTTTTGTCCCTAAAACATGTGGCTGTTACCCTGGTTGCTTTAATGAAGAAATCATCTTTGATAAAGTGTAGCTGAAGTTTTGCTAGTTATTGTTGCACAGACCAGTCTAATCAATATGATCTTATGGCAGGATAATCTTTTGAG
CDS Sequence
- >Zm00001eb184870_T002
ATGGCGGGTGGCGGCGAGGGGGATCGCGTGGGTGTCGGGGGAGCCCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTTCTCTGCGACGGCGACGCCACCAGCTCCCGGGAGGTGCTGCGGCTCCTCTGCAACTGCTCATACCATGTGACCTGCGCCAAGTCTCCGCGGCAGGTGATCAATATCCTCAACTACGAGGGCGGCGAGATCGACATCATCCTGGCTGAGGTCGATCTTCCGGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCCGGAACAAGGACCTGCGTCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTGTCTGTTGTTGTCAAGTGCTTGCGGCTTGGCGCCGCCGAGTACCTGGTGAAGCCGCTGCGCACGAATGAGTTGCTGAACCTTTGGACCCATGTGTGGCGGCGGAGACGGATGCTTGGTTTGCCCGAGAAAAACTTCTTCAATGACAACTTCGAGTTGGTGCTCTCAGAACCTAGCGATGCCAATACCAATAGCACCACCCTCCTCTCAGACGAGACCGACGATAGGCCTAAAGGAAACACGAATCAAGAAACAGGCACCTCAAAGCAACTTGAATACGAGTCTAATCCTTCGGTTGCTGAGCCCGACCAGAGAGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCACCAGCTCATTTGACAGCGAATTACAAAGGGGTGGCAGCCGATTAGATTCCTTGGATAACCAGGGTAATTGCTCTAGCGCAACCGATAGAAGTGACACTGGTACTGATGTAAATATTCGGAGTAAAGAAGCTTTTGAGATGCCTGCGCAGTACCCTATGGTATGGTTTTCTTCCTCTAACATGCATATGGAGCGAAGCAGCGAAGGCCATAATGATACTTCAGGAACTCCACCTGCATACCATTTCCCATTTTATTACCCAGGGATGGTAGAGCACAACATGGCACTTTCGTCGGCGCAAGATTTTCAAGCAAACATAAACAATGCTCAAGCACATACACCGCCAGCGATGCTTCCTCAGTACAATGTTTATCCTCAGTGCCATGGTTTACCTGTGATACCATCATTTCAGTTTAATCCTTCTGGCATGAGTACGCACTCAAGTCATTTACCAACGCAAAATGTGTGGTCATCGGCATCGAGCACACCACCAGTGCCTGAGGAAACATGCAGTCGCTCTGAAAGGAGGGCTGCAGCACTTGCCAAGTTCAGGCTGAAGAGGAAAGAGCGCTGCTTTGACAAGAAGGTGAGGTATGTGAACCGGAAGAAACTCGCTGAAACGAGGCCAAGGGTGCGAGGTCAGTTTGTTAGACAGCCAACCAATACGGATGTCATCAGCATTGGAGATGATATATCTGAAGACGAAGATGACGATCCATCGTCCAGGGAGGTAGATATGGTTTCTTCTCCAGAGTAG - >Zm00001eb184870_T001
ATGGCGGGTGGCGGCGAGGGGGATCGCGTGGGTGTCGGGGGAGCCCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTTCTCTGCGACGGCGACGCCACCAGCTCCCGGGAGGTGCTGCGGCTCCTCTGCAACTGCTCATACCATGTGACCTGCGCCAAGTCTCCGCGGCAGGTGATCAATATCCTCAACTACGAGGGCGGCGAGATCGACATCATCCTGGCTGAGGTCGATCTTCCGGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCCGGAACAAGGACCTGCGTCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTGTCTGTTGTTGTCAAGTGCTTGCGGCTTGGCGCCGCCGAGTACCTGGTGAAGCCGCTGCGCACGAATGAGTTGCTGAACCTTTGGACCCATGTGTGGCGGCGGAGACGGATGCTTGGTTTGCCCGAGAAAAACTTCTTCAATGACAACTTCGAGTTGGTGCTCTCAGAACCTAGCGATGCCAATACCAATAGCACCACCCTCCTCTCAGACGAGACCGACGATAGGCCTAAAGGAAACACGAATCAAGAAACAGGCACCTCAAAGCAACTTGAATACGAGTCTAATCCTTCGGTTGCTGAGCCCGACCAGAGAGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCACCAGCTCATTTGACAGCGAATTACAAAGGGGTGGCAGCCGATTAGATTCCTTGGATAACCAGGGTAATTGCTCTAGCGCAACCGATAGAAGTGACACTGGTACTGATGTAAATATTCGGAGTAAAGAAGCTTTTGAGATGCCTGCGCAGTACCCTATGGTATGGTTTTCTTCCTCTAACATGCATATGGAGCGAAGCAGCGAAGGCCATAATGATACTTCAGGAACTCCACCTGCATACCATTTCCCATTTTATTACCCAGGGATGGTAGAGCACAACATGGCACTTTCGTCGGCGCAAGATTTTCAAGCAAACATAAACAATGCTCAAGCACATACACCGCCAGCGATGCTTCCTCAGTACAATGTTTATCCTCAGTGCCATGGTTTACCTGTGATACCATCATTTCAGTTTAATCCTTCTGGCATGAGTACGCACTCAAGTCATTTACCAACGCAAAATGTGTGGTCATCGGCATCGAGCACACCACCAGTGCCTGAGGAAACATGCAGTCGCTCTGAAAGGAGGGCTGCAGCACTTGCCAAGTTCAGGCTGAAGAGGAAAGAGCGCTGCTTTGACAAGAAGGTGAGGTATGTGAACCGGAAGAAACTCGCTGAAACGAGGCCAAGGGTGCGAGGTCAGTTTGTTAGACAGCCAACCAATACGGATGTCATCAGCATTGGAGATGATATATCTGAAGACGAAGATGACGATCCATCGTCCAGGGAGGTAGATATGGTTTCTTCTCCAGAGTAG
Protein Sequence
- >Zm00001eb184870_P002
MAGGGEGDRVGVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEYESNPSVAEPDQREKMEGVPGSALDASKKSSPRRAFSRPIKTNLRVAESSAFLAYVKPSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDRSDTGTDVNIRSKEAFEMPAQYPMVWFSSSNMHMERSSEGHNDTSGTPPAYHFPFYYPGMVEHNMALSSAQDFQANINNAQAHTPPAMLPQYNVYPQCHGLPVIPSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDVISIGDDISEDEDDDPSSREVDMVSSPE - >Zm00001eb184870_P001
MAGGGEGDRVGVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEYESNPSVAEPDQREKMEGVPGSALDASKKSSPRRAFSRPIKTNLRVAESSAFLAYVKPSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDRSDTGTDVNIRSKEAFEMPAQYPMVWFSSSNMHMERSSEGHNDTSGTPPAYHFPFYYPGMVEHNMALSSAQDFQANINNAQAHTPPAMLPQYNVYPQCHGLPVIPSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDVISIGDDISEDEDDDPSSREVDMVSSPE
Source: Genetic information comes from the article