Information report for ZmTCP21;tcptf1
Gene Details
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Functional Descriptions
- These results indicate that ZmTCP proteins bind to TBS motifs and exhibit sensitivity to methylated TBS in vitro.
- EMSA showed that four GST-ZmTCP proteins (ZmPCF1, ZmTCP21, Zm00001d018806, and ZmTCP10) tested preferred to bind unmethylated TBS fragments.
- ZmTCP proteins bind to TBS motifs and exhibit sensitivity to methylated TBS in vitro.
Literature and News
Gene Resources
- NCBI ID: LOC100279595
- UniProt accessions: B7ZYZ0
- EMBL: BT054532 , CM000782
- EnsemblPlants: Zm00001eb279580_T001
- Gramene: Zm00001eb279580_T001
- KEGG: zma:100279595
- OMA: PYRTVIG
- ExpressionAtlas: Zm00001eb279580
- InterPro: IPR005333 , IPR017887
- PANTHER: PTHR31072 , PTHR31072:SF184
- PROSITE: PS51369
- OrthoDB: B7ZYZ0
- SMR: B7ZYZ0
Sequences
cDNA Sequence
- >Zm00001eb279580_T001
GTCTCCTGTCTTGATGTTCTCTCTCTCGCTCCCTCTCTCTCCCCCCACTCTCCTATCATATGCTCCTCTCTTCTCCTTCCTCCGGCCATCGTCCTCGCTGCAACGCACTAGATTTGTCGACAAACCCAACCAGAACTCCATAAAATAGTGTCGATCACCGCAGACACACCTCCTTCCCTCCCTCTCTCTCTCAAATTTTTTTTGCCTCCGACGGCAAGCACCACAAGCGCAAGCCCTCGCTTCCTTGACCTCACTCTTTCGCTCTCACTAGCTCTAACGCCGCCGTCGACTCGACGGCGCTGCCGAACCTCTACTGCGTACTGCCCCACGTCATCACACCAAATCAGGTTAGCAGACCCACAAGAACAGTTCGTGGGTCAGCAAATCCATTCCTAGGACCGATATTCCTCCAGCTCCCTGAACAGGAAAAAAACACATCTTTGTGTGTATTTATACCATGGTCTAATCGGCTATGGACGCCACCGGAGATGCCGGCGGAGGTCGCCGCCCCAACTTCCCTTTGCAGCTTCTGGAGAAGAAGGAGGAACAGCCTTGCTCCACGTCCCCAGCAGCTGCTGTGGGTGCTGGGGCTAATGGGTCGGGAGAGATGCAGATGAAGAAGGTGGCGCCGCCGAAACGCACATCGAGCAAGGACCGGCACACGAAGGTGGACGGGCGCGGGCGGCGCATCCGGATGCCGGCAATCTGCGCAGCTCGGGTGTTCCAGCTGACGAGGGAGCTGGGGCACAGGACGGACGGCGAGACAATCGAGTGGCTGCTGCAGCAGGCGGAGCCCGCGGTGATCGCGGCCACGGGCACCGGCACCATCCCGGCCAACTTCACCTCGCTCAACATTTCTCTCCGCTCCTCGGGCTCCTCCTTCTCCATCCCAGCGCACCTCCGTGCTGCCGGTTTGCCCGGCCCACGCTTCAGCGGCGCGCGGGGAGACCCGTGGGAGCGCGTCGTGGGCCTCGGGTTCGGCGGCGCCGAGGGTCCTCCATCTGCTACTTCGTCTCCGCTGCTGCTAAGCTTCCACTCCGGCAGCGTCGGCCTTGACGTGTCATCACCGTCGTCGTCGTCTGCTGCCGCCAACTCCGACCTGTCGAAGAAACGGCGGTGGGAGCAAGAAATGCAGCAGCAGCAGCAGCAATACCAGCAGCAGATGGCCGGGTACACGCAGAGCCAAATGCCAGGAACCGTGTGGATGGTGCCGAGCAGCAACGCTCAGGCCGCAGCAGCGGCTGGCGGAGGCGGCAGCAGCAACAACGAGTCGATCTGGACGTTCCCGCCGCAACCAGGAAGCGGCGACGGCGGCGCGGCGCCCGTGTACCGCGGCGTGCCGAGTGGGCTACATTTCATGAATTTCCCCGCCCCGATGGCGCTGATACCCGGTGGGCAGCAGCTCGGGATCGGCCACGAAAATGGCGGCAGCAGCAGCGGAGGCGAGGGCCACATGGGGGTCCTCGCCGCGCTCAACGCGTACCGGGCGCATGCCGTCACGGTGGCTGCGCCGGCGGCGCAGAACGGAGCGGAAGGCGGCTCTAGTCAGCAGCAGCAGCGTGGCGGCGGCGAGCGACAAGACAGCATGAGCCCCAGCGACGACGACTCGTAGGTCTTCTCGGAGGCTTGTGCTGTGCATGCACTGGTCCGCTAAGGCGTCGCTCCTGTTTTTAATCTGCGCTTCTCTTGACTTATCGTTTGCGTTTTCTTCGGTTTGCGTTATTATAGCCTTCTCTGGCTCCTTCACATTCTATATATTGCAAGCACAGAGTTCGATTTCATGGCATCTGAAACAAATTCACTCTCCAAAGTTCGTTTTGGTGTGACCAATCGCATCAACAGAGACGACGACGATGGCGGGGAATCCATGGAAGAGAGGCTTTGGATTTTGTTAGGGTTCGACGCGGCCACGGCAAAAGATGGAAGAGAGATCGACATGGACACAGCAGCCATTGCCCAATGTTCAGCCATGCATATGATGATCCTTCTTCCGGGACTAGTTAGGGGCCCGTGCGTTGCAACGGTTTCTATATATCACATTGATAAACCTTGCTTTAATGAGATAACTGTTG
CDS Sequence
- >Zm00001eb279580_T001
ATGGACGCCACCGGAGATGCCGGCGGAGGTCGCCGCCCCAACTTCCCTTTGCAGCTTCTGGAGAAGAAGGAGGAACAGCCTTGCTCCACGTCCCCAGCAGCTGCTGTGGGTGCTGGGGCTAATGGGTCGGGAGAGATGCAGATGAAGAAGGTGGCGCCGCCGAAACGCACATCGAGCAAGGACCGGCACACGAAGGTGGACGGGCGCGGGCGGCGCATCCGGATGCCGGCAATCTGCGCAGCTCGGGTGTTCCAGCTGACGAGGGAGCTGGGGCACAGGACGGACGGCGAGACAATCGAGTGGCTGCTGCAGCAGGCGGAGCCCGCGGTGATCGCGGCCACGGGCACCGGCACCATCCCGGCCAACTTCACCTCGCTCAACATTTCTCTCCGCTCCTCGGGCTCCTCCTTCTCCATCCCAGCGCACCTCCGTGCTGCCGGTTTGCCCGGCCCACGCTTCAGCGGCGCGCGGGGAGACCCGTGGGAGCGCGTCGTGGGCCTCGGGTTCGGCGGCGCCGAGGGTCCTCCATCTGCTACTTCGTCTCCGCTGCTGCTAAGCTTCCACTCCGGCAGCGTCGGCCTTGACGTGTCATCACCGTCGTCGTCGTCTGCTGCCGCCAACTCCGACCTGTCGAAGAAACGGCGGTGGGAGCAAGAAATGCAGCAGCAGCAGCAGCAATACCAGCAGCAGATGGCCGGGTACACGCAGAGCCAAATGCCAGGAACCGTGTGGATGGTGCCGAGCAGCAACGCTCAGGCCGCAGCAGCGGCTGGCGGAGGCGGCAGCAGCAACAACGAGTCGATCTGGACGTTCCCGCCGCAACCAGGAAGCGGCGACGGCGGCGCGGCGCCCGTGTACCGCGGCGTGCCGAGTGGGCTACATTTCATGAATTTCCCCGCCCCGATGGCGCTGATACCCGGTGGGCAGCAGCTCGGGATCGGCCACGAAAATGGCGGCAGCAGCAGCGGAGGCGAGGGCCACATGGGGGTCCTCGCCGCGCTCAACGCGTACCGGGCGCATGCCGTCACGGTGGCTGCGCCGGCGGCGCAGAACGGAGCGGAAGGCGGCTCTAGTCAGCAGCAGCAGCGTGGCGGCGGCGAGCGACAAGACAGCATGAGCCCCAGCGACGACGACTCGTAG
Protein Sequence
- >Zm00001eb279580_P001
MDATGDAGGGRRPNFPLQLLEKKEEQPCSTSPAAAVGAGANGSGEMQMKKVAPPKRTSSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHRTDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSFSIPAHLRAAGLPGPRFSGARGDPWERVVGLGFGGAEGPPSATSSPLLLSFHSGSVGLDVSSPSSSSAAANSDLSKKRRWEQEMQQQQQQYQQQMAGYTQSQMPGTVWMVPSSNAQAAAAAGGGGSSNNESIWTFPPQPGSGDGGAAPVYRGVPSGLHFMNFPAPMALIPGGQQLGIGHENGGSSSGGEGHMGVLAALNAYRAHAVTVAAPAAQNGAEGGSSQQQQRGGGERQDSMSPSDDDS