Information report for ZmSWEET2;ZmSWEET14
Gene Details
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Functional Descriptions
- ZmSWEET2 was identified as a candidate gene associated with flowering time in this study
- ZmSWEET2 as a promising candidate gene for flowering time regulation.
- ZmSWEET2 is associated with flowering time, and the upstream eQTL is nearby a local XP-CLR peak, in addition to one sQTL in the gene body near another selective sweep signal peak.
- Sugars will eventually be exported 2 (sweet2, Zm00001d009365) was identified as a candidate gene associated with flowering time in this study and exhibited selective sweep signatures with a slightly increased expression heritability in temperate maize
Functional Keywords
Literature and News
- A role for heritable transcriptomic variation in maize adaptation to temperate environments. DOI: 10.1186/s13059-023-02891-3 ; PMID: 36964601
- Unravelling structural, functional, evolutionary and genetic basis of SWEET transporters regulating abiotic stress tolerance in maize. DOI: 10.1016/j.ijbiomac.2022.12.326 ; PMID: 36603713
- Insights on the SWEET Gene Role in Soluble Sugar Accumulation via the CO2 Fixation Pathway in Forage Maize Under Salt Stress DOI: 10.1007/s00344-023-11112-x ; PMID:
Gene Resources
- NCBI ID: 100279636
- UniProt accessions: A0A1D6FJ44 , A0A1D6FJ45
- EMBL: CM000784
- AlphaFoldDB: A0A1D6FJ45
Sequences
cDNA Sequence
- >Zm00001eb342040_T003
GACCGAGAAGGAAAGCGCGAATTAAAGCAGCACGGGCAACACGCCGAGCAAAACAGCGAAATCCTCAAATCCCCACCCCGGCTGGTGACGGCGCCGCCCCCGCTGCTGCCTGCGGTCCTGCTTCTGCTAATAGTAATAGGTATTCAGATTCGAGCAGAGCACTCCCGTGCTGCAGGCAAGGGAGGACGCACCACCATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGAGCATGCCAAAAGGGAAAAAAAACAAGGTTCGATAACCTGCCCATTTGTTCTCGCTCTCTCATCTCTTTCTCTTAACTTTATAACCATTTGGTAACGTTGTAGCAGCTGCACATTAAAGCAACTTCATCTTTACACGTCATAGATAAGTTCTTCAATTAAATACTGCTTACAAAAAGTCTGTATATATCTAATGTTCGGATAACCTGCAAGCAATCACATGTTCATTTTGAAAATGTTTGCTTCAATAGACTTTGCCAAAGACATACTAGAAGCAACCTCGTTTTTACACATATGGGTGGTCAATAAAGACGCAGGTAGCTTTTTTTTATTGGGTGTCACTTTCTTGCAAGATATTGCTGTCTTTTGGTACGGCTCAAACGCTTTGGTTTTCTTGGACGCAAGGCACTAAACATGGTCCCCATCCAACAAATATTATATTATATTATATTAGTCTGATTTCAGCTGGAGAATAATCCATGTTGCTGGATCTGAGCTGGCACTAAGTCAATCTAGTCTCTCCTAATTTTCAGGTTCGCTGATAGGCTTTCCCGAAATCCTGTCTCTGGTCAAACTTCCAGGTCGATGTACTTGTCCGAATTGTTTTGCTCCTGTGAAAAAAGCATGCCGTTCTTTCGTTTTGTTTACACGCGACGGGGATCGTAGTTTCGCTGTATATTCCATGGTAGATGCTCCAAGTTGTTGCTGGAGTCATTCGTTTATGAGTGAGCGAAGCTTTGTATATAATATAGTAGTAGTAATGTGGTTCCGTGAACTTCATCAACAGAGAGGACCAGCTGTATACACAAAGAAA - >Zm00001eb342040_T002
GACCGAGAAGGAAAGCGCGAATTAAAGCAGCACGGGCAACACGCCGAGCAAAACAGCGAAATCCTCAAATCCCCACCCCGGCTGGTGACGGCGCCGCCCCCGCTGCTGCCTGCGGTCCTGCTTCTGCTAATAGTAATAGGTATTCAGATTCGAGCAGAGCACTCCCGTGCTGCAGGCAAGGGAGGACGCACCACCATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGAGCATGCCAAAAGGGAAAAAAAACAAGGTTCGATAACCTGCCCATTTGTTCTCGCTCTCTCATCTCTTTCTCTTAACTTTATAACCATTTGGTAACGTTGTAGCAGCTGCACATTAAAGCAACTTCATCTTTACACGTCATAGATAAGTTCTTCAATTAAATACTGCTTACAAAAAGTCTGTATATATCTAATGTTCGGATAACCTGCAAGCAATCACATGTTCATTTTGAAAATGTTTGCTTCAATAGACTTTGCCAAAGACATACTAGAAGCAACCTCGTTTTTACACATATGGGTGGTCAATAAAGACGCAGGTAGCTTTTTTTTATTGGGTGTCACTTTCTTGCAAGATATTGCTGTCTTTTGGTACGGCTCAAACGCTTTGGTTTTCTTGGACGCAAGGCACTAAACATGGTCCCCATCCAACAAATATTATATTATATTATATTAGTCTGATTTCAGCTGGAGAATAATCCATGTTGCTGGATCTGAGCTGGCACTAAGTCAATCTAGTCTCTCCTAATTTTCAGGTTCGCTGATAGGCTTTCCCGAAATCCTGTCTCTGGTCAAACTTCCAGGTCGATGTACTTGTCCGAATTGTTTTGCTCCTGTGAAAAAAGCATGCCGTTCTTTCGTTTTGTTTACACGCGACGGGGATCGTAGTTTCGCTGTATATTCCATGGTAGATGCTCCAAGTTGTTGCTGGAGTCATTCGTTTATGAGTGAGCGAAGCTTTGTATATAATATAGTAGTAGTAATGTGGTTCCGTGAACTTCATCAACAGAGAGGACCAGCTGTATACACAAAGAAA - >Zm00001eb342040_T001
GACCGAGAAGGAAAGCGCGAATTAAAGCAGCACGGGCAACACGCCGAGCAAAACAGCGAAATCCTCAAATCCCCACCCCGGCTGGTGACGGCGCCGCCCCCGCTGCTGCCTGCGGTCCTGCTTCTGCTAATAGTAATAGGTATTCAGATTCGAGCAGAGCACTCCCGTGCTGCAGGCAAGGGAGGACGCACCACCATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGAGCATGCCAAAAGGGAAAAAAAACAAGGTTCGATAACCTGCCCATTTGTTCTCGCTCTCTCATCTCTTTCTCTTAACTTTATAACCATTTGGTAACGTTGTAGCAGCTGCACATTAAAGCAACTTCATCTTTACACGTCATAGATAAGTTCTTCAATTAAATACTGCTTACAAAAAGTCTGTATATATCTAATGTTCGGATAACCTGCAAGCAATCACATGTTCATTTTGAAAATGTTTGCTTCAATAGACTTTGCCAAAGACATACTAGAAGCAACCTCGTTTTTACACATATGGGTGGTCAATAAAGACGCAGGTAGCTTTTTTTTATTGGGTGTCACTTTCTTGCAAGATATTGCTGTCTTTTGGTACGGCTCAAACGCTTTGGTTTTCTTGGACGCAAGGCACTAAACATGGTCCCCATCCAACAAATATTATATTATATTATATTAGTCTGATTTCAGCTGGAGAATAATCCATGTTGCTGGATCTGAGCTGGCACTAAGTCAATCTAGTCTCTCCTAATTTTCAGGTTCGCTGATAGGCTTTCCCGAAATCCTGTCTCTGGTCAAACTTCCAGGTCGATGTACTTGTCCGAATTGTTTTGCTCCTGTGAAAAAAGCATGCCGTTCTTTCGTTTTGTTTACACGCGACGGGGATCGTAGTTTCGCTGTATATTCCATGGTAGATGCTCCAAGTTGTTGCTGGAGTCATTCGTTTATGAGTGAGCGAAGCTTTGTATATAATATAGTAGTAGTAATGTGGTTCCGTGAACTTCATCAACAGAGAGGACCAGCTGTATACACAAAGAAA
CDS Sequence
- >Zm00001eb342040_T003
ATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGA - >Zm00001eb342040_T002
ATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGA - >Zm00001eb342040_T001
ATGGATTGGGATGCTCCGGCATTGACGAGCTTCGTCGCCGACTTGTCCTTCCGCCACCTCTGCTGCTACGGGGCCGGAATCGCAGGGAACGCCTTCGCCTTCGTGCTCTTCGTCTCCCCGCTCCCCACATTCAAGAGGATCGTCCGCAACGGATCCACGGAGCAGTTCTCGTGCACGCCGTACATCTACTCGCTGCTCAACTGCCTCATCTGCATGTGGTACGGCCTCCCCTTCGTCTCCTACGGCGTCGTCCTCGTCGCCACCGTCAACTCCATCGGCGCCGTGTTCCAGCTCGCCTACACCGCCGTGTTCATCGCCTTCGCCGACGCCAAGCAGAGGCTCAAGGTCTCTGCTCTCCTGGCCGCTGTCTTCCTGGTGTTCGGACTGATTGTGTTTGTTAGTCTGGCTTTGTTGGATCACAAAGCCCGGCAGGTGTTCGTCGGATATCTCAGCGTCGCGTCCCTCGTATGCATGTTCGCGTCCCCCATGTCAATCGTCAATCTGGTCATCCGGACGAAGAGCGTGGAATACATGCCCTTCTACTTGTCATTATCCATGTTTCTGATGAGTGCATCCTTCGTCATATACGGAGTGCTGCTTGGTGATGGCTTCATATATATTCCAAATGGCATTGGAACCATATTGGGTATCGTACAGTTGCTGCTGTATGCCTACATCAGAAAGGGATCAAGCGAGGAAGCCAAGCTGCCCTTACTAATCACACATACATGA
Protein Sequence
- >Zm00001eb342040_P003
MDWDAPALTSFVADLSFRHLCCYGAGIAGNAFAFVLFVSPLPTFKRIVRNGSTEQFSCTPYIYSLLNCLICMWYGLPFVSYGVVLVATVNSIGAVFQLAYTAVFIAFADAKQRLKVSALLAAVFLVFGLIVFVSLALLDHKARQVFVGYLSVASLVCMFASPMSIVNLVIRTKSVEYMPFYLSLSMFLMSASFVIYGVLLGDGFIYIPNGIGTILGIVQLLLYAYIRKGSSEEAKLPLLITHT - >Zm00001eb342040_P002
MDWDAPALTSFVADLSFRHLCCYGAGIAGNAFAFVLFVSPLPTFKRIVRNGSTEQFSCTPYIYSLLNCLICMWYGLPFVSYGVVLVATVNSIGAVFQLAYTAVFIAFADAKQRLKVSALLAAVFLVFGLIVFVSLALLDHKARQVFVGYLSVASLVCMFASPMSIVNLVIRTKSVEYMPFYLSLSMFLMSASFVIYGVLLGDGFIYIPNGIGTILGIVQLLLYAYIRKGSSEEAKLPLLITHT - >Zm00001eb342040_P001
MDWDAPALTSFVADLSFRHLCCYGAGIAGNAFAFVLFVSPLPTFKRIVRNGSTEQFSCTPYIYSLLNCLICMWYGLPFVSYGVVLVATVNSIGAVFQLAYTAVFIAFADAKQRLKVSALLAAVFLVFGLIVFVSLALLDHKARQVFVGYLSVASLVCMFASPMSIVNLVIRTKSVEYMPFYLSLSMFLMSASFVIYGVLLGDGFIYIPNGIGTILGIVQLLLYAYIRKGSSEEAKLPLLITHT