Gene Details:
- Gene ID: Zm00001eb195650
- Gene Symbol: ZmSCR
- Gene Name: scarecrow1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Zea mays SCARECROW (ZmSCR), the putative maize SCR ortholog, was used as a molecular marker to investigate radial patterning during regeneration of the root tip after either whole or partial excision.
- Expression of the putative maize ortholog Zea mays SCARECROW (ZmSCR) is localized to the endodermal cell layer, suggesting that SCR plays a similar role in conserved pathways involved in regulation of the radial patterning of the diverse RAMs in these two species.
- ZmSCR is utilized in common developmental mechanisms that give rise to all root types in maize.
- ZmSCR regulates the radial organization of the root.
- ZmSCR mRNA expresses in endodermis and quiescent center of root, influencing radial pattern.
Function-related keywords:
Literature:
- Molecular analysis of the SCARECROW gene in maize reveals a common basis for radial patterning in diverse meristems. DOI: 10.1105/tpc.12.8.1307 ; PMID: 10948251
- C(4) leaf development and evolution. DOI: 10.1016/j.pbi.2023.102454 ; PMID: 37743123
- A key to totipotency: Wuschel-like homeobox 2a unlocks embryogenic culture response in maize (Zea mays L.). DOI: 10.1111/pbi.14098 ; PMID: 37357571
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Zm00001eb195650_T001
GCGGCGTCTTCCTCTTTACTCCTCCCGCTCTCCCTCCCTCGCACCGTCCGTCTGCTAGCTCAGCCTACTCACTCCACTCAACTCACCCCCAACTCCACTCCGCTCCCGAGCCCGGACTGACTGACTGACTGTGGTGGTGGTGGTGCATCAGCAGCCCGCGCGGCGCCAAAACACGCAAACTGCTCCCTCCCTCACTCACCCCTATCCCCCGCGCTGGGTCGCCCGATCGCCATGCGCGCGGCGGCTTCCTCTTGGCGTTTCTAGATGGGCTCCTCCTCCTCCCTCCTCTTCTCCTCGTCCTCCTCCGCCGCATCCACCGCCCCCCACTCCTTTCCCCACTCTCATGCCACCGCCACCGCCTCCGCCTCCTCTCACTCCTTATTGCCGCCGCTGCCCTCCCCCACACCTCCCTCCGCCTCCTCCTTCTTCCCCAAACCACTTCCTCCTCCACTACCTCCATCAGCTAGACCACCAAGAAGCCGCCGCCGCCGCCATGGTCCGCAAGCGCCCCGCGTCCGACATGGACCTCCCGCCGCCGCGCCGCCACGTCACGGGCGACCTCTCCGACGTCACGGCGGCCGCTGCCGCCGGTGTTGGTGGTAGTGGCGCGCCGTCCTCCGCCAGCGCGCAGCTGCCCGCGCTGCCCACCCAGCTCCACCAGCTGCCCCCCGCGTTCCAGCACCACGCGCCGGAGGTGGACGTGCCCGCGCACCCGGCCCCGGCCGCCCACGCGCAGGCGGGCGGCGAGGCAACCGCGTCCACGACCGCGTGGGTGGACGGCATCATCCGCGACATCATCGGGAGCAGCGGCGGCGCCGCGGTCTCCATCACGCAGCTCATCCACAACGTCCGCGAGATCATCCACCCCTGCAACCCCGGCCTCGCGTCGCTCCTGGAGCTCCGCCTCCGCTCCCTCCTCGCAGCCGACCCGGCCCCACTGCCGCCGCCGCCGCAGCCGCAGCAGCATGCTCTCCTGCACGGCGCTCCGGCCGCCGCTCCCGCGGGGCTGACGCTCCCTCCCCCGCCACCGCTTCCGGACAAGCGCCGCCACGAGCATCCACCGCCGTGCCAGCAGCAACAGCAGGAGGAACCGCATCCGGCGCCGCAGTCGCCCAAGGCCCCGACCGCGGAAGAGACCGCAGCGGCGGCCGCCGCCGCACAAGCAGCAGCTGCTGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTGCAGTGCGCCGAGGCCGTGAACGCGGACAACCTGGACGACGCGCACCAGACGCTGCTGGAGATCGCGGAGCTAGCGACGCCGTTCGGCACCTCGACGCAGCGCGTGGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTCGTCAGCTCCTGCCTGGGCCTGTACGCGCCGCTGCCGCCGGGCTCCCCCGCCGCGGCGCGCCTCCACGGCCGCGTCGCCGCCGCGTTCCAGGTGTTCAACGGCATCAGCCCCTTCGTCAAGTTCTCGCACTTCACCGCCAACCAGGCCATCCAGGAGGCGTTCGAGCGGGAGGAGCGCGTGCACATCATCGACCTCGACATCATGCAGGGGCTGCAGTGGCCGGGGCTCTTCCACATCCTTGCCTCCCGCCCCGGGGGCCCGCCCAGGGTGAGGCTCACCGGCCTCGGGGCGTCCATGGAGGCGCTCGAGGCCACGGGGAAGCGCCTCTCCGATTTCGCCGACACGCTCGGCCTGCCCTTCGAGTTCTGCGCCGTCGCCGAGAAGGCCGGCAATGTTGACCCGGAGAAGCTAGGGGTCACGAGGCGGGAGGCCGTCGCCGTCCACTGGCTGCACCACTCGCTCTACGACGTCACTGGCTCCGACTCCAACACGCTCTGGCTCATCCAAAGGCTGGCCCCCAAGGTGGTGACAATGGTGGAGCAGGACCTGAGCCACTCGGGCTCCTTCCTGGCGCGCTTCGTGGAGGCCATCCACTACTACTCGGCGCTGTTCGACTCGCTGGACGCGAGCTACGGCGAGGACAGCCCCGAGCGGCACGTCGTGGAGCAGCAGCTGCTGTCGCGGGAGATCCGCAACGTGCTGGCCGTGGGCGGGCCGGCCCGCACCGGCGACGTCAAGTTCGGCAGCTGGCGCGAGAAGCTGGCGCAGTCCGGGTTCCGCGCCGCCTCGCTCGCCGGCAGCGCCGCGGCGCAGGCGTCCCTGCTGCTCGGCATGTTCCCCTCCGACGGGTACACGCTGGTGGAGGAGAACGGCGCGCTGAAGCTCGGGTGGAAGGACCTCTGCCTGCTCACCGCGTCGGCCTGGCGCCCCATCCAGGTGCCGCCGTGCCGTTGATGAGACCTCTGCCTGCTCCTGCTTGCGTTGAGAGGCCGCCACTCCACTTGTTTTGCATCTGTAGCTGCTCGGTTTGGTCATCAGCTGGGAGATAAGAAAAGCGGAAACGTACTAATTGCTCTGGAGTAGATCCATCCATTCACAGTGATAGTTACTGATGTACTAAGCTTTAATTAGTTCAATGCTAGATCGTTCTTGTTCAGGTGTCGATCGCGTATCCTTGTCCTTGGTCTCCTTTTCATTTTGGTGCTTTGTCTAGTCGCTTTCCCGACTAATGCCGTGCTCTTCATGCGCGTTCTAGTGAAGATTCTTGCCGAGAATATTAGCATAGTTTTCATGTAAAGTAGCCATCAAGCAAGTATTAATTTGTGGCTACTTCAATGACATCCTAAGGCCATGTTTTGAACACCTTTTGCATCCTAATCCTAGAATC
CDS Sequence
- >Zm00001eb195650_T001
ATGCCACCGCCACCGCCTCCGCCTCCTCTCACTCCTTATTGCCGCCGCTGCCCTCCCCCACACCTCCCTCCGCCTCCTCCTTCTTCCCCAAACCACTTCCTCCTCCACTACCTCCATCAGCTAGACCACCAAGAAGCCGCCGCCGCCGCCATGGTCCGCAAGCGCCCCGCGTCCGACATGGACCTCCCGCCGCCGCGCCGCCACGTCACGGGCGACCTCTCCGACGTCACGGCGGCCGCTGCCGCCGGTGTTGGTGGTAGTGGCGCGCCGTCCTCCGCCAGCGCGCAGCTGCCCGCGCTGCCCACCCAGCTCCACCAGCTGCCCCCCGCGTTCCAGCACCACGCGCCGGAGGTGGACGTGCCCGCGCACCCGGCCCCGGCCGCCCACGCGCAGGCGGGCGGCGAGGCAACCGCGTCCACGACCGCGTGGGTGGACGGCATCATCCGCGACATCATCGGGAGCAGCGGCGGCGCCGCGGTCTCCATCACGCAGCTCATCCACAACGTCCGCGAGATCATCCACCCCTGCAACCCCGGCCTCGCGTCGCTCCTGGAGCTCCGCCTCCGCTCCCTCCTCGCAGCCGACCCGGCCCCACTGCCGCCGCCGCCGCAGCCGCAGCAGCATGCTCTCCTGCACGGCGCTCCGGCCGCCGCTCCCGCGGGGCTGACGCTCCCTCCCCCGCCACCGCTTCCGGACAAGCGCCGCCACGAGCATCCACCGCCGTGCCAGCAGCAACAGCAGGAGGAACCGCATCCGGCGCCGCAGTCGCCCAAGGCCCCGACCGCGGAAGAGACCGCAGCGGCGGCCGCCGCCGCACAAGCAGCAGCTGCTGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTGCAGTGCGCCGAGGCCGTGAACGCGGACAACCTGGACGACGCGCACCAGACGCTGCTGGAGATCGCGGAGCTAGCGACGCCGTTCGGCACCTCGACGCAGCGCGTGGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTCGTCAGCTCCTGCCTGGGCCTGTACGCGCCGCTGCCGCCGGGCTCCCCCGCCGCGGCGCGCCTCCACGGCCGCGTCGCCGCCGCGTTCCAGGTGTTCAACGGCATCAGCCCCTTCGTCAAGTTCTCGCACTTCACCGCCAACCAGGCCATCCAGGAGGCGTTCGAGCGGGAGGAGCGCGTGCACATCATCGACCTCGACATCATGCAGGGGCTGCAGTGGCCGGGGCTCTTCCACATCCTTGCCTCCCGCCCCGGGGGCCCGCCCAGGGTGAGGCTCACCGGCCTCGGGGCGTCCATGGAGGCGCTCGAGGCCACGGGGAAGCGCCTCTCCGATTTCGCCGACACGCTCGGCCTGCCCTTCGAGTTCTGCGCCGTCGCCGAGAAGGCCGGCAATGTTGACCCGGAGAAGCTAGGGGTCACGAGGCGGGAGGCCGTCGCCGTCCACTGGCTGCACCACTCGCTCTACGACGTCACTGGCTCCGACTCCAACACGCTCTGGCTCATCCAAAGGCTGGCCCCCAAGGTGGTGACAATGGTGGAGCAGGACCTGAGCCACTCGGGCTCCTTCCTGGCGCGCTTCGTGGAGGCCATCCACTACTACTCGGCGCTGTTCGACTCGCTGGACGCGAGCTACGGCGAGGACAGCCCCGAGCGGCACGTCGTGGAGCAGCAGCTGCTGTCGCGGGAGATCCGCAACGTGCTGGCCGTGGGCGGGCCGGCCCGCACCGGCGACGTCAAGTTCGGCAGCTGGCGCGAGAAGCTGGCGCAGTCCGGGTTCCGCGCCGCCTCGCTCGCCGGCAGCGCCGCGGCGCAGGCGTCCCTGCTGCTCGGCATGTTCCCCTCCGACGGGTACACGCTGGTGGAGGAGAACGGCGCGCTGAAGCTCGGGTGGAAGGACCTCTGCCTGCTCACCGCGTCGGCCTGGCGCCCCATCCAGGTGCCGCCGTGCCGTTGA
Protein Sequence
- >Zm00001eb195650_P001
MPPPPPPPPLTPYCRRCPPPHLPPPPPSSPNHFLLHYLHQLDHQEAAAAAMVRKRPASDMDLPPPRRHVTGDLSDVTAAAAAGVGGSGAPSSASAQLPALPTQLHQLPPAFQHHAPEVDVPAHPAPAAHAQAGGEATASTTAWVDGIIRDIIGSSGGAAVSITQLIHNVREIIHPCNPGLASLLELRLRSLLAADPAPLPPPPQPQQHALLHGAPAAAPAGLTLPPPPPLPDKRRHEHPPPCQQQQQEEPHPAPQSPKAPTAEETAAAAAAAQAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCAEAVNADNLDDAHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPPGSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREAVAVHWLHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWRPIQVPPCR
Source: Genetic information comes from the article