Gene Details:

Functional Descriptions:

  • Zea mays SCARECROW (ZmSCR), the putative maize SCR ortholog, was used as a molecular marker to investigate radial patterning during regeneration of the root tip after either whole or partial excision.
  • Expression of the putative maize ortholog Zea mays SCARECROW (ZmSCR) is localized to the endodermal cell layer, suggesting that SCR plays a similar role in conserved pathways involved in regulation of the radial patterning of the diverse RAMs in these two species.
  • ZmSCR is utilized in common developmental mechanisms that give rise to all root types in maize.
  • ZmSCR regulates the radial organization of the root.
  • ZmSCR mRNA expresses in endodermis and quiescent center of root, influencing radial pattern.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb195650_T001
    GCGGCGTCTTCCTCTTTACTCCTCCCGCTCTCCCTCCCTCGCACCGTCCGTCTGCTAGCTCAGCCTACTCACTCCACTCAACTCACCCCCAACTCCACTCCGCTCCCGAGCCCGGACTGACTGACTGACTGTGGTGGTGGTGGTGCATCAGCAGCCCGCGCGGCGCCAAAACACGCAAACTGCTCCCTCCCTCACTCACCCCTATCCCCCGCGCTGGGTCGCCCGATCGCCATGCGCGCGGCGGCTTCCTCTTGGCGTTTCTAGATGGGCTCCTCCTCCTCCCTCCTCTTCTCCTCGTCCTCCTCCGCCGCATCCACCGCCCCCCACTCCTTTCCCCACTCTCATGCCACCGCCACCGCCTCCGCCTCCTCTCACTCCTTATTGCCGCCGCTGCCCTCCCCCACACCTCCCTCCGCCTCCTCCTTCTTCCCCAAACCACTTCCTCCTCCACTACCTCCATCAGCTAGACCACCAAGAAGCCGCCGCCGCCGCCATGGTCCGCAAGCGCCCCGCGTCCGACATGGACCTCCCGCCGCCGCGCCGCCACGTCACGGGCGACCTCTCCGACGTCACGGCGGCCGCTGCCGCCGGTGTTGGTGGTAGTGGCGCGCCGTCCTCCGCCAGCGCGCAGCTGCCCGCGCTGCCCACCCAGCTCCACCAGCTGCCCCCCGCGTTCCAGCACCACGCGCCGGAGGTGGACGTGCCCGCGCACCCGGCCCCGGCCGCCCACGCGCAGGCGGGCGGCGAGGCAACCGCGTCCACGACCGCGTGGGTGGACGGCATCATCCGCGACATCATCGGGAGCAGCGGCGGCGCCGCGGTCTCCATCACGCAGCTCATCCACAACGTCCGCGAGATCATCCACCCCTGCAACCCCGGCCTCGCGTCGCTCCTGGAGCTCCGCCTCCGCTCCCTCCTCGCAGCCGACCCGGCCCCACTGCCGCCGCCGCCGCAGCCGCAGCAGCATGCTCTCCTGCACGGCGCTCCGGCCGCCGCTCCCGCGGGGCTGACGCTCCCTCCCCCGCCACCGCTTCCGGACAAGCGCCGCCACGAGCATCCACCGCCGTGCCAGCAGCAACAGCAGGAGGAACCGCATCCGGCGCCGCAGTCGCCCAAGGCCCCGACCGCGGAAGAGACCGCAGCGGCGGCCGCCGCCGCACAAGCAGCAGCTGCTGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTGCAGTGCGCCGAGGCCGTGAACGCGGACAACCTGGACGACGCGCACCAGACGCTGCTGGAGATCGCGGAGCTAGCGACGCCGTTCGGCACCTCGACGCAGCGCGTGGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTCGTCAGCTCCTGCCTGGGCCTGTACGCGCCGCTGCCGCCGGGCTCCCCCGCCGCGGCGCGCCTCCACGGCCGCGTCGCCGCCGCGTTCCAGGTGTTCAACGGCATCAGCCCCTTCGTCAAGTTCTCGCACTTCACCGCCAACCAGGCCATCCAGGAGGCGTTCGAGCGGGAGGAGCGCGTGCACATCATCGACCTCGACATCATGCAGGGGCTGCAGTGGCCGGGGCTCTTCCACATCCTTGCCTCCCGCCCCGGGGGCCCGCCCAGGGTGAGGCTCACCGGCCTCGGGGCGTCCATGGAGGCGCTCGAGGCCACGGGGAAGCGCCTCTCCGATTTCGCCGACACGCTCGGCCTGCCCTTCGAGTTCTGCGCCGTCGCCGAGAAGGCCGGCAATGTTGACCCGGAGAAGCTAGGGGTCACGAGGCGGGAGGCCGTCGCCGTCCACTGGCTGCACCACTCGCTCTACGACGTCACTGGCTCCGACTCCAACACGCTCTGGCTCATCCAAAGGCTGGCCCCCAAGGTGGTGACAATGGTGGAGCAGGACCTGAGCCACTCGGGCTCCTTCCTGGCGCGCTTCGTGGAGGCCATCCACTACTACTCGGCGCTGTTCGACTCGCTGGACGCGAGCTACGGCGAGGACAGCCCCGAGCGGCACGTCGTGGAGCAGCAGCTGCTGTCGCGGGAGATCCGCAACGTGCTGGCCGTGGGCGGGCCGGCCCGCACCGGCGACGTCAAGTTCGGCAGCTGGCGCGAGAAGCTGGCGCAGTCCGGGTTCCGCGCCGCCTCGCTCGCCGGCAGCGCCGCGGCGCAGGCGTCCCTGCTGCTCGGCATGTTCCCCTCCGACGGGTACACGCTGGTGGAGGAGAACGGCGCGCTGAAGCTCGGGTGGAAGGACCTCTGCCTGCTCACCGCGTCGGCCTGGCGCCCCATCCAGGTGCCGCCGTGCCGTTGATGAGACCTCTGCCTGCTCCTGCTTGCGTTGAGAGGCCGCCACTCCACTTGTTTTGCATCTGTAGCTGCTCGGTTTGGTCATCAGCTGGGAGATAAGAAAAGCGGAAACGTACTAATTGCTCTGGAGTAGATCCATCCATTCACAGTGATAGTTACTGATGTACTAAGCTTTAATTAGTTCAATGCTAGATCGTTCTTGTTCAGGTGTCGATCGCGTATCCTTGTCCTTGGTCTCCTTTTCATTTTGGTGCTTTGTCTAGTCGCTTTCCCGACTAATGCCGTGCTCTTCATGCGCGTTCTAGTGAAGATTCTTGCCGAGAATATTAGCATAGTTTTCATGTAAAGTAGCCATCAAGCAAGTATTAATTTGTGGCTACTTCAATGACATCCTAAGGCCATGTTTTGAACACCTTTTGCATCCTAATCCTAGAATC
CDS Sequence
  • >Zm00001eb195650_T001
    ATGCCACCGCCACCGCCTCCGCCTCCTCTCACTCCTTATTGCCGCCGCTGCCCTCCCCCACACCTCCCTCCGCCTCCTCCTTCTTCCCCAAACCACTTCCTCCTCCACTACCTCCATCAGCTAGACCACCAAGAAGCCGCCGCCGCCGCCATGGTCCGCAAGCGCCCCGCGTCCGACATGGACCTCCCGCCGCCGCGCCGCCACGTCACGGGCGACCTCTCCGACGTCACGGCGGCCGCTGCCGCCGGTGTTGGTGGTAGTGGCGCGCCGTCCTCCGCCAGCGCGCAGCTGCCCGCGCTGCCCACCCAGCTCCACCAGCTGCCCCCCGCGTTCCAGCACCACGCGCCGGAGGTGGACGTGCCCGCGCACCCGGCCCCGGCCGCCCACGCGCAGGCGGGCGGCGAGGCAACCGCGTCCACGACCGCGTGGGTGGACGGCATCATCCGCGACATCATCGGGAGCAGCGGCGGCGCCGCGGTCTCCATCACGCAGCTCATCCACAACGTCCGCGAGATCATCCACCCCTGCAACCCCGGCCTCGCGTCGCTCCTGGAGCTCCGCCTCCGCTCCCTCCTCGCAGCCGACCCGGCCCCACTGCCGCCGCCGCCGCAGCCGCAGCAGCATGCTCTCCTGCACGGCGCTCCGGCCGCCGCTCCCGCGGGGCTGACGCTCCCTCCCCCGCCACCGCTTCCGGACAAGCGCCGCCACGAGCATCCACCGCCGTGCCAGCAGCAACAGCAGGAGGAACCGCATCCGGCGCCGCAGTCGCCCAAGGCCCCGACCGCGGAAGAGACCGCAGCGGCGGCCGCCGCCGCACAAGCAGCAGCTGCTGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTGCAGTGCGCCGAGGCCGTGAACGCGGACAACCTGGACGACGCGCACCAGACGCTGCTGGAGATCGCGGAGCTAGCGACGCCGTTCGGCACCTCGACGCAGCGCGTGGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTCGTCAGCTCCTGCCTGGGCCTGTACGCGCCGCTGCCGCCGGGCTCCCCCGCCGCGGCGCGCCTCCACGGCCGCGTCGCCGCCGCGTTCCAGGTGTTCAACGGCATCAGCCCCTTCGTCAAGTTCTCGCACTTCACCGCCAACCAGGCCATCCAGGAGGCGTTCGAGCGGGAGGAGCGCGTGCACATCATCGACCTCGACATCATGCAGGGGCTGCAGTGGCCGGGGCTCTTCCACATCCTTGCCTCCCGCCCCGGGGGCCCGCCCAGGGTGAGGCTCACCGGCCTCGGGGCGTCCATGGAGGCGCTCGAGGCCACGGGGAAGCGCCTCTCCGATTTCGCCGACACGCTCGGCCTGCCCTTCGAGTTCTGCGCCGTCGCCGAGAAGGCCGGCAATGTTGACCCGGAGAAGCTAGGGGTCACGAGGCGGGAGGCCGTCGCCGTCCACTGGCTGCACCACTCGCTCTACGACGTCACTGGCTCCGACTCCAACACGCTCTGGCTCATCCAAAGGCTGGCCCCCAAGGTGGTGACAATGGTGGAGCAGGACCTGAGCCACTCGGGCTCCTTCCTGGCGCGCTTCGTGGAGGCCATCCACTACTACTCGGCGCTGTTCGACTCGCTGGACGCGAGCTACGGCGAGGACAGCCCCGAGCGGCACGTCGTGGAGCAGCAGCTGCTGTCGCGGGAGATCCGCAACGTGCTGGCCGTGGGCGGGCCGGCCCGCACCGGCGACGTCAAGTTCGGCAGCTGGCGCGAGAAGCTGGCGCAGTCCGGGTTCCGCGCCGCCTCGCTCGCCGGCAGCGCCGCGGCGCAGGCGTCCCTGCTGCTCGGCATGTTCCCCTCCGACGGGTACACGCTGGTGGAGGAGAACGGCGCGCTGAAGCTCGGGTGGAAGGACCTCTGCCTGCTCACCGCGTCGGCCTGGCGCCCCATCCAGGTGCCGCCGTGCCGTTGA
Protein Sequence
  • >Zm00001eb195650_P001
    MPPPPPPPPLTPYCRRCPPPHLPPPPPSSPNHFLLHYLHQLDHQEAAAAAMVRKRPASDMDLPPPRRHVTGDLSDVTAAAAAGVGGSGAPSSASAQLPALPTQLHQLPPAFQHHAPEVDVPAHPAPAAHAQAGGEATASTTAWVDGIIRDIIGSSGGAAVSITQLIHNVREIIHPCNPGLASLLELRLRSLLAADPAPLPPPPQPQQHALLHGAPAAAPAGLTLPPPPPLPDKRRHEHPPPCQQQQQEEPHPAPQSPKAPTAEETAAAAAAAQAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCAEAVNADNLDDAHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPPGSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREAVAVHWLHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWRPIQVPPCR

Source: Genetic information comes from the article