Information report for ZmSAUR15
Gene Details
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Functional Descriptions
- Polymorphisms in the ZmSAUR15 promoter that influence the expression of ZmSAUR15 transcripts modulate the EC induction capacity in maize.
- ZmSAUR15, which encodes a small auxin-upregulated RNA, acts as a negative effector in maize EC induction.
- ZmSAUR15 may repress cell expansion and cell division, which consequently disturbs the meristematic status of the callus and inhibits EC formation.
- ZmSAUR15 is involved in indole-3-acetic acid biosynthesis and cell division in immature embryo-derived callus.
- Genetic variants in ZmSAUR15 promoter are linked to the ECIR and IAA content in maize.
- The ability of immature embryos to induce EC formation can be improved by the knockout of ZmSAUR15, which consequently increases the callus regeneration efficiency.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 103645805
- UniProt accessions: A0A1D6DUW7
- EMBL: CM007648
- AlphaFoldDB: A0A1D6DUW7
- KEGG: zma:103645805
- OMA: LRFCHAD
- InterPro: IPR003676
- PANTHER: PTHR31374 , PTHR31374:SF119
- OrthoDB: A0A1D6DUW7
Sequences
cDNA Sequence
- >Zm00001eb228160_T001
CCAACAACAGCACAGAAAACCCCACAGGTCATAGACAGCGGAGCTCCCTCCAGTCTCCATCCAATAACACGAGCTAACCACCGCCCAACCGAAACCGGGCCCCACCGGTCTCCCCGTCGCCACGTACGCGGCCGGAGCGCCCTATACAAGCGCCACGTCGATCGCCGACTCGCCGTCGCCGCGTCCCCCACGGCTCTTCCTTCATCCTCCGGCGAGCTATAAATCCCTCCCGCCGACGCCACCCCCATGGCATCCCGCGGTTCCCCTTCCTCCTACTCCTCCCCGAGGACCCCGACGTCGTCGAAGGCTAACCCTTGGCCCGCGCCCTCCGCCCCGCCGCTGTACCCGACGCTCTCCATGGCCGACCTCGCGCCCGTCGAGATAGGGCCCGCCTCGTCGCCGACGGCCTCGGATGACTACAACGCGCCTCCGCCGTCTGAGGACGTCCTCCTCCGGGTCCCCGGCGCGCGGCTCCACCTCGTCGACCGCAGCCGCAGCCACCCGCTGGCCGCCGGCGACCTCTCCCTCCTCCGCATCCGCTCCGGCGACACCTCCCTGGCCGCCATCGCGCTGCTGGGCCCGGTCCAGTGGCCGCTCGCGCGCGACGTGGCCGCCGTCAAGCTGGATCCCTGCCACTACGCCTTCTCCCTCACCGTGCCGGCCTCCGCCGACGACCCCAGCCCCGACCCGCTCCACTACGGCCTCACGCTCTCCCGCCCCGATGTGCGCCTCGACGGCGTCCTCGCTGCCTACACCAGCTTCTCCGTGCACGCCGTGGTCGGCGCCGGGCAGCTGGAGGCCAGGGTGCGCGACGAGGCCGAGGCCGCCGCGTACTGGACGGCCGTCGCGCCCAACGTGGAGGCGTACGGAGGCGCGGTGGCCAGGACCATCGCCACGGGCGCCGAGCACCTCGCCAAGGGGATACTGTGGTGCGGGGAGGTCACGGTGGAGAGGCTCCGTTGGGGCAATGAGGTCCTCAAGAGGAGGATGCAGCCTGGCGACGCCAACGCCGAGGTCAGCCCCGAGATGCTCAGGCGAATCAAAAGGGCTAAGAGGGTGAGCCAAATATCTGAGAAAGTGGCGACTGGGATTTTGTCCGGAGTGGTGAAGGTCACTGGTTACTTCACAAGCTCTCTGGCCAACTCGAAAGCTGGCAAGAAGTTCTTCAACATGTTGCCTGGAGAGATCGTTCTTGCTTCGCTTGACGGATTTGGGAAGATCTGCGACGCCGTGGAGGTGGCCGGAAAGAACGTTTTGTCCACGTCGTCAACTGTGACGACCGGGCTAGTATCTCACAGGTACGGAGACAAAGCCGCCGCCGCAACGAACGAAGGGCTGGACGCCGCCGGGCACGCCATCGGGACGGCATGGGCCGTGTTCAAGATCCGGCAGGCCTTGAACCCCAAGAGCGTCCTCAAACCCACGGCGCTGGCCACGTCCACCATCAGGGCCAACGTTGCCGAGCTTCGCGCGATGCACGGCAGCAGCAAGTAGCTCGCGCCTGCCGTCCCTGTTTCGTAAAAACTCTATTATCTCGCTCTGTCACGACCAACGATGCACTCGCTGCTTCCAGCAGCAGCGTTGGCTGTTGCCTGTTGGCCTGTAAATTCGTGTGGCTGAAACTGGGAAAGCCGGGAACTGAAAGGCTTACCGCTTCCGCTTTGTTAGTGATGCTGGTGATGTTCTAAGAGCTTTTACCACTGCTGTGCTGCTGCGTTGGCTTG
CDS Sequence
- >Zm00001eb228160_T001
ATGGCATCCCGCGGTTCCCCTTCCTCCTACTCCTCCCCGAGGACCCCGACGTCGTCGAAGGCTAACCCTTGGCCCGCGCCCTCCGCCCCGCCGCTGTACCCGACGCTCTCCATGGCCGACCTCGCGCCCGTCGAGATAGGGCCCGCCTCGTCGCCGACGGCCTCGGATGACTACAACGCGCCTCCGCCGTCTGAGGACGTCCTCCTCCGGGTCCCCGGCGCGCGGCTCCACCTCGTCGACCGCAGCCGCAGCCACCCGCTGGCCGCCGGCGACCTCTCCCTCCTCCGCATCCGCTCCGGCGACACCTCCCTGGCCGCCATCGCGCTGCTGGGCCCGGTCCAGTGGCCGCTCGCGCGCGACGTGGCCGCCGTCAAGCTGGATCCCTGCCACTACGCCTTCTCCCTCACCGTGCCGGCCTCCGCCGACGACCCCAGCCCCGACCCGCTCCACTACGGCCTCACGCTCTCCCGCCCCGATGTGCGCCTCGACGGCGTCCTCGCTGCCTACACCAGCTTCTCCGTGCACGCCGTGGTCGGCGCCGGGCAGCTGGAGGCCAGGGTGCGCGACGAGGCCGAGGCCGCCGCGTACTGGACGGCCGTCGCGCCCAACGTGGAGGCGTACGGAGGCGCGGTGGCCAGGACCATCGCCACGGGCGCCGAGCACCTCGCCAAGGGGATACTGTGGTGCGGGGAGGTCACGGTGGAGAGGCTCCGTTGGGGCAATGAGGTCCTCAAGAGGAGGATGCAGCCTGGCGACGCCAACGCCGAGGTCAGCCCCGAGATGCTCAGGCGAATCAAAAGGGCTAAGAGGGTGAGCCAAATATCTGAGAAAGTGGCGACTGGGATTTTGTCCGGAGTGGTGAAGGTCACTGGTTACTTCACAAGCTCTCTGGCCAACTCGAAAGCTGGCAAGAAGTTCTTCAACATGTTGCCTGGAGAGATCGTTCTTGCTTCGCTTGACGGATTTGGGAAGATCTGCGACGCCGTGGAGGTGGCCGGAAAGAACGTTTTGTCCACGTCGTCAACTGTGACGACCGGGCTAGTATCTCACAGGTACGGAGACAAAGCCGCCGCCGCAACGAACGAAGGGCTGGACGCCGCCGGGCACGCCATCGGGACGGCATGGGCCGTGTTCAAGATCCGGCAGGCCTTGAACCCCAAGAGCGTCCTCAAACCCACGGCGCTGGCCACGTCCACCATCAGGGCCAACGTTGCCGAGCTTCGCGCGATGCACGGCAGCAGCAAGTAG
Protein Sequence
- >Zm00001eb228160_P001
MASRGSPSSYSSPRTPTSSKANPWPAPSAPPLYPTLSMADLAPVEIGPASSPTASDDYNAPPPSEDVLLRVPGARLHLVDRSRSHPLAAGDLSLLRIRSGDTSLAAIALLGPVQWPLARDVAAVKLDPCHYAFSLTVPASADDPSPDPLHYGLTLSRPDVRLDGVLAAYTSFSVHAVVGAGQLEARVRDEAEAAAYWTAVAPNVEAYGGAVARTIATGAEHLAKGILWCGEVTVERLRWGNEVLKRRMQPGDANAEVSPEMLRRIKRAKRVSQISEKVATGILSGVVKVTGYFTSSLANSKAGKKFFNMLPGEIVLASLDGFGKICDAVEVAGKNVLSTSSTVTTGLVSHRYGDKAAAATNEGLDAAGHAIGTAWAVFKIRQALNPKSVLKPTALATSTIRANVAELRAMHGSSK