Gene Details:
- Gene ID: Zm00001eb417610
- Gene Symbol: ZmPIF3.3 bhlh117
- Gene Name: bHLH-transcription factor 117
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- We found that only the ZmPIF3.1:GFP, ZmPIF3.2:GFP, ZmPIF3.3:GFP, and ZmPIF4.2:GFP fusion proteins, but not others, formed visible nuclear bodies in Arabidopsis seedlings after a short exposure to high intensity of red light, hinting that other ZmPIFs may have distinct interacting properties with Atphys.
- Confirming a critical role for ZmPIF3.3 in regulating EH and as a selective target.
- Mutations in ZmPIF3.3 led to a significant reduction in plant height, and its favorable (height-reducing) alleles have been subject to substantial enrichment selection during modern maize breeding.
Function-related keywords:
- seedlings , breeding , height , plant-height
Literature:
- Genome-wide selection and genetic improvement during modern maize breeding. DOI: 10.1038/s41588-020-0616-3 ; PMID: 32341525
Related News:
Gene Resources:
- NCBI ID: LOC103641361
- UniProt accessions: K7TIH0
Sequences:
cDNA Sequence
- >Zm00001eb417610_T002
TGCTTCTACGGCGGTAGGTAGGTGCCGCGTCGGCGCGTCGCCTTCCTTCAACTGCGCCTGCCCGCACCGCATCTCTTCTCCTTGCTCCATCTCCCTACTGCTCCAGCTCCTATCCTCTTGGCTCCGCCCGTCCGCGGTCCGCGTGTGTGCGCTCCATCCTTCTCCACCACCTGTCGCCGGGCCAACCGCACCGCCCTCTGATGACTGGGCCGGGCGAGGAGCTGGCCGAGCTGCTGTGGGACCGTGGCCCGGCGCTGCGGAGGGCGCCGCCGCCGTTCCAGCCCTTCACCTGCAGCGCCGCCGGCAGCAGCAGGTCGCAGGAGCTGAAGCGGCATGCCTCGGACACCACCAAGGCGTCAGCGTTCGTGACCGCCGTCTCCGTCCCGCTGGGCACGCACGACGCCGGCTCCGGGCTCGGGCTCGCCGGCCTCCCCGTCCACGACGACGACGACGCCGTGCCGTGGTTGCATTGCCCCGTCGCCGACGACGGCGACGGCGACACGGCGCCGCTGCCGCCGGAGTTCTGCGCCGGCCTCCTGTCCGAGTACTCGGAGGTGGCCGCGCCGGCGCCGGCCTTCCACGCCGCGGCCACGCCGCCGGCCGAGGCCGCGGCCAACAAGCTGGCCCCGCCGAGCGCCGCCGGCGGAGGGGAGGGCGTCTTGAACTTCACCTTCTTCTCGCGGCCCCTCCAGCGACCGCAGGCGGCGGCGGCGCCCGCCGCCGCGGCCGCGAGCAACCCCGTCGAGTCCACGGTCGTCCAGGCGGCAGCGAACCGGCTGCGGAGCACGCCGCTGTTCTCCGAGCAGAGGATGGCGTGGCTGCAGCCACCCAAGGCGCCGCGCACCACAGCGGCAGCGGCGGCGCCACCTCCTCCTCCGCTGGCGCCTCTGCTCCCAGATAGCCGCCATGGGGAGACGGTCGGCACGGTAGCTCAACCTCAGCCCCGGTCGCAACCAGAAGCAAGACCTCCGGATGCGGCGGCGGTGACGACCTCTTCGGTCTGCTCCGGCAACGGTGGTCGGAGCCAGCTCAAGAGGAGCCGCCACCTGGCCGCGGACTGCTCGGTCAGTCCGGACGAGGACCTGGACGACGAGCCCGGCGCGACGAGGAGGTCGGCGGCGCGGAGCGCCAAGCGCTGCCGCACCGCCGAGGTGCACAACCTGTCGGAGAGGAGGAGACGGGACCGGATCAACGAGAAGATGCGCGCCCTGCAGGAGCTCATTCCCAACTGCAACAAGGTCGACAAGTCGTCGATGCTGGAGGAGGCGATCGAGTACCTGAAGACGCTGCAGCTGCAAGTGCAGATGATGTCGATGGGGACCGGGCTGTGCATGCCACCGGCGGCGATGCTGCTGCCAGCGATGCAGCAGCAGCTCCTGCACCACCACCCCATGGCGCACTTCCCCCATCTCGGCATGGGCCTGGGCTTCGGCATGGGCGCGGCGGCGGGGTTCGACATGCTCCCGTTCCCGTGCGTCGCGGCCGGCGCCCACTTCCCGTGCCCGCCGGGGGCCATGTTCGGCGTGCCGGGGCAGGCGATGCCCTCGCTGCCGGCGGCGTTCGCTCACATGTACGGCGCTGGCAGTGGCGCCGGGCCGGCTGGGCAGACGGAAGCTGCTGATGCGGCTGCTCCTGCACGGCCAGGAGAGGCAGAGCAGGGTGATCAGCAGGTGCAGCACGCGAAGCAGACGTGATGGCGAAGGCGACGAGGCGGCTGCCCCCCGAACATTCCCGTTTGGTTTTATGGTGATTATGAGAATCTACCCATCAAAATCTGCTAAGAGAGAGCCAAACAAACAGGATATTACACCTTGGATTCTGTGCATTATCTCACAATCAAGGTTCAAGTTGATTTTCTTG - >Zm00001eb417610_T001
TGCTTCTACGGCGGTAGGTAGGTGCCGCGTCGGCGCGTCGCCTTCCTTCAACTGCGCCTGCCCGCACCGCATCTCTTCTCCTTGCTCCATCTCCCTACTGCTCCAGCTCCTATCCTCTTGGCTCCGCCCGTCCGCGGTCCGCGTGTGTGCGCTCCATCCTTCTCCACCACCTGTCGCCGGGCCAACCGCACCGCCCTCTGATGACTGGGCCGGGCGAGGAGCTGGCCGAGCTGCTGTGGGACCGTGGCCCGGCGCTGCGGAGGGCGCCGCCGCCGTTCCAGCCCTTCACCTGCAGCGCCGCCGGCAGCAGCAGGTCGCAGGAGCTGAAGCGGCATGCCTCGGACACCACCAAGGCGTCAGCGTTCGTGACCGCCGTCTCCGTCCCGCTGGGCACGCACGACGCCGGCTCCGGGCTCGGGCTCGCCGGCCTCCCCGTCCACGACGACGACGACGCCGTGCCGTGGTTGCATTGCCCCGTCGCCGACGACGGCGACGGCGACACGGCGCCGCTGCCGCCGGAGTTCTGCGCCGGCCTCCTGTCCGAGTACTCGGAGGTGGCCGCGCCGGCGCCGGCCTTCCACGCCGCGGCCACGCCGCCGGCCGAGGCCGCGGCCAACAAGCTGGCCCCGCCGAGCGCCGCCGGCGGAGGGGAGGGCGTCTTGAACTTCACCTTCTTCTCGCGGCCCCTCCAGCGACCGCAGGCGGCGGCGGCGCCCGCCGCCGCGGCCGCGAGCAACCCCGTCGAGTCCACGGTCGTCCAGGCGGCAGCGAACCGGCTGCGGAGCACGCCGCTGTTCTCCGAGCAGAGGATGGCGTGGCTGCAGCCACCCAAGGCGCCGCGCACCACAGCGGCAGCGGCGGCGCCACCTCCTCCTCCGCTGGCGCCTCTGCTCCCAGATAGCCGCCATGGGGAGACGGTCGGCACGGTAGCTCAACCTCAGCCCCGGTCGCAACCAGAAGCAAGACCTCCGGATGCGGCGGCGGTGACGACCTCTTCGGTCTGCTCCGGCAACGGTGGTCGGAGCCAGCTCAAGAGGAGCCGCCACCTGGCCGCGGACTGCTCGGTCAGTCCGGACGAGGACCTGGACGACGAGCCCGGCGCGACGAGGAGGTCGGCGGCGCGGAGCGCCAAGCGCTGCCGCACCGCCGAGGTGCACAACCTGTCGGAGAGGAGGAGACGGGACCGGATCAACGAGAAGATGCGCGCCCTGCAGGAGCTCATTCCCAACTGCAACAAGGTCGACAAGTCGTCGATGCTGGAGGAGGCGATCGAGTACCTGAAGACGCTGCAGCTGCAAGTGCAGATGATGTCGATGGGGACCGGGCTGTGCATGCCACCGGCGGCGATGCTGCTGCCAGCGATGCAGCAGCAGCTCCTGCACCACCACCCCATGGCGCACTTCCCCCATCTCGGCATGGGCCTGGGCTTCGGCATGGGCGCGGCGGCGGGGTTCGACATGCTCCCGTTCCCGTGCGTCGCGGCCGGCGCCCACTTCCCGTGCCCGCCGGGGGCCATGTTCGGCGTGCCGGGGCAGGCGATGCCCTCGCTGCCGGCGGCGTTCGCTCACATGTACGGCGCTGGCAGTGGCGCCGGGCCGGCTGGGCAGACGGAAGCTGCTGATGCGGCTGCTCCTGCACGGCCAGGAGAGGCAGAGCAGGGTGATCAGCAGGTGCAGCACGCGAAGCAGACGTGATGGCGAAGGCGACGAGGCGGCTGCCCCCCGAACATTCCCGTTTGGTTTTATGGTGATTATGAGAATCTACCCATCAAAATCTGCTAAGAGAGAGCCAAACAAACAGGATATTACACCTTGGATTCTGTGCATTATCTCACAATCAAGGTTCAAGTTGATTTTCTTG
CDS Sequence
- >Zm00001eb417610_T002
ATGACTGGGCCGGGCGAGGAGCTGGCCGAGCTGCTGTGGGACCGTGGCCCGGCGCTGCGGAGGGCGCCGCCGCCGTTCCAGCCCTTCACCTGCAGCGCCGCCGGCAGCAGCAGGTCGCAGGAGCTGAAGCGGCATGCCTCGGACACCACCAAGGCGTCAGCGTTCGTGACCGCCGTCTCCGTCCCGCTGGGCACGCACGACGCCGGCTCCGGGCTCGGGCTCGCCGGCCTCCCCGTCCACGACGACGACGACGCCGTGCCGTGGTTGCATTGCCCCGTCGCCGACGACGGCGACGGCGACACGGCGCCGCTGCCGCCGGAGTTCTGCGCCGGCCTCCTGTCCGAGTACTCGGAGGTGGCCGCGCCGGCGCCGGCCTTCCACGCCGCGGCCACGCCGCCGGCCGAGGCCGCGGCCAACAAGCTGGCCCCGCCGAGCGCCGCCGGCGGAGGGGAGGGCGTCTTGAACTTCACCTTCTTCTCGCGGCCCCTCCAGCGACCGCAGGCGGCGGCGGCGCCCGCCGCCGCGGCCGCGAGCAACCCCGTCGAGTCCACGGTCGTCCAGGCGGCAGCGAACCGGCTGCGGAGCACGCCGCTGTTCTCCGAGCAGAGGATGGCGTGGCTGCAGCCACCCAAGGCGCCGCGCACCACAGCGGCAGCGGCGGCGCCACCTCCTCCTCCGCTGGCGCCTCTGCTCCCAGATAGCCGCCATGGGGAGACGGTCGGCACGGTAGCTCAACCTCAGCCCCGGTCGCAACCAGAAGCAAGACCTCCGGATGCGGCGGCGGTGACGACCTCTTCGGTCTGCTCCGGCAACGGTGGTCGGAGCCAGCTCAAGAGGAGCCGCCACCTGGCCGCGGACTGCTCGGTCAGTCCGGACGAGGACCTGGACGACGAGCCCGGCGCGACGAGGAGGTCGGCGGCGCGGAGCGCCAAGCGCTGCCGCACCGCCGAGGTGCACAACCTGTCGGAGAGGAGGAGACGGGACCGGATCAACGAGAAGATGCGCGCCCTGCAGGAGCTCATTCCCAACTGCAACAAGGTCGACAAGTCGTCGATGCTGGAGGAGGCGATCGAGTACCTGAAGACGCTGCAGCTGCAAGTGCAGATGATGTCGATGGGGACCGGGCTGTGCATGCCACCGGCGGCGATGCTGCTGCCAGCGATGCAGCAGCAGCTCCTGCACCACCACCCCATGGCGCACTTCCCCCATCTCGGCATGGGCCTGGGCTTCGGCATGGGCGCGGCGGCGGGGTTCGACATGCTCCCGTTCCCGTGCGTCGCGGCCGGCGCCCACTTCCCGTGCCCGCCGGGGGCCATGTTCGGCGTGCCGGGGCAGGCGATGCCCTCGCTGCCGGCGGCGTTCGCTCACATGTACGGCGCTGGCAGTGGCGCCGGGCCGGCTGGGCAGACGGAAGCTGCTGATGCGGCTGCTCCTGCACGGCCAGGAGAGGCAGAGCAGGGTGATCAGCAGGTGCAGCACGCGAAGCAGACGTGA - >Zm00001eb417610_T001
ATGACTGGGCCGGGCGAGGAGCTGGCCGAGCTGCTGTGGGACCGTGGCCCGGCGCTGCGGAGGGCGCCGCCGCCGTTCCAGCCCTTCACCTGCAGCGCCGCCGGCAGCAGCAGGTCGCAGGAGCTGAAGCGGCATGCCTCGGACACCACCAAGGCGTCAGCGTTCGTGACCGCCGTCTCCGTCCCGCTGGGCACGCACGACGCCGGCTCCGGGCTCGGGCTCGCCGGCCTCCCCGTCCACGACGACGACGACGCCGTGCCGTGGTTGCATTGCCCCGTCGCCGACGACGGCGACGGCGACACGGCGCCGCTGCCGCCGGAGTTCTGCGCCGGCCTCCTGTCCGAGTACTCGGAGGTGGCCGCGCCGGCGCCGGCCTTCCACGCCGCGGCCACGCCGCCGGCCGAGGCCGCGGCCAACAAGCTGGCCCCGCCGAGCGCCGCCGGCGGAGGGGAGGGCGTCTTGAACTTCACCTTCTTCTCGCGGCCCCTCCAGCGACCGCAGGCGGCGGCGGCGCCCGCCGCCGCGGCCGCGAGCAACCCCGTCGAGTCCACGGTCGTCCAGGCGGCAGCGAACCGGCTGCGGAGCACGCCGCTGTTCTCCGAGCAGAGGATGGCGTGGCTGCAGCCACCCAAGGCGCCGCGCACCACAGCGGCAGCGGCGGCGCCACCTCCTCCTCCGCTGGCGCCTCTGCTCCCAGATAGCCGCCATGGGGAGACGGTCGGCACGGTAGCTCAACCTCAGCCCCGGTCGCAACCAGAAGCAAGACCTCCGGATGCGGCGGCGGTGACGACCTCTTCGGTCTGCTCCGGCAACGGTGGTCGGAGCCAGCTCAAGAGGAGCCGCCACCTGGCCGCGGACTGCTCGGTCAGTCCGGACGAGGACCTGGACGACGAGCCCGGCGCGACGAGGAGGTCGGCGGCGCGGAGCGCCAAGCGCTGCCGCACCGCCGAGGTGCACAACCTGTCGGAGAGGAGGAGACGGGACCGGATCAACGAGAAGATGCGCGCCCTGCAGGAGCTCATTCCCAACTGCAACAAGGTCGACAAGTCGTCGATGCTGGAGGAGGCGATCGAGTACCTGAAGACGCTGCAGCTGCAAGTGCAGATGATGTCGATGGGGACCGGGCTGTGCATGCCACCGGCGGCGATGCTGCTGCCAGCGATGCAGCAGCAGCTCCTGCACCACCACCCCATGGCGCACTTCCCCCATCTCGGCATGGGCCTGGGCTTCGGCATGGGCGCGGCGGCGGGGTTCGACATGCTCCCGTTCCCGTGCGTCGCGGCCGGCGCCCACTTCCCGTGCCCGCCGGGGGCCATGTTCGGCGTGCCGGGGCAGGCGATGCCCTCGCTGCCGGCGGCGTTCGCTCACATGTACGGCGCTGGCAGTGGCGCCGGGCCGGCTGGGCAGACGGAAGCTGCTGATGCGGCTGCTCCTGCACGGCCAGGAGAGGCAGAGCAGGGTGATCAGCAGGTGCAGCACGCGAAGCAGACGTGA
Protein Sequence
- >Zm00001eb417610_P002
MTGPGEELAELLWDRGPALRRAPPPFQPFTCSAAGSSRSQELKRHASDTTKASAFVTAVSVPLGTHDAGSGLGLAGLPVHDDDDAVPWLHCPVADDGDGDTAPLPPEFCAGLLSEYSEVAAPAPAFHAAATPPAEAAANKLAPPSAAGGGEGVLNFTFFSRPLQRPQAAAAPAAAAASNPVESTVVQAAANRLRSTPLFSEQRMAWLQPPKAPRTTAAAAAPPPPPLAPLLPDSRHGETVGTVAQPQPRSQPEARPPDAAAVTTSSVCSGNGGRSQLKRSRHLAADCSVSPDEDLDDEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGTGLCMPPAAMLLPAMQQQLLHHHPMAHFPHLGMGLGFGMGAAAGFDMLPFPCVAAGAHFPCPPGAMFGVPGQAMPSLPAAFAHMYGAGSGAGPAGQTEAADAAAPARPGEAEQGDQQVQHAKQT - >Zm00001eb417610_P001
MTGPGEELAELLWDRGPALRRAPPPFQPFTCSAAGSSRSQELKRHASDTTKASAFVTAVSVPLGTHDAGSGLGLAGLPVHDDDDAVPWLHCPVADDGDGDTAPLPPEFCAGLLSEYSEVAAPAPAFHAAATPPAEAAANKLAPPSAAGGGEGVLNFTFFSRPLQRPQAAAAPAAAAASNPVESTVVQAAANRLRSTPLFSEQRMAWLQPPKAPRTTAAAAAPPPPPLAPLLPDSRHGETVGTVAQPQPRSQPEARPPDAAAVTTSSVCSGNGGRSQLKRSRHLAADCSVSPDEDLDDEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGTGLCMPPAAMLLPAMQQQLLHHHPMAHFPHLGMGLGFGMGAAAGFDMLPFPCVAAGAHFPCPPGAMFGVPGQAMPSLPAAFAHMYGAGSGAGPAGQTEAADAAAPARPGEAEQGDQQVQHAKQT
Source: Genetic information comes from the article