Information report for ZmPIF3.2;bhlh65
Gene Details
|
|
Functional Descriptions
- ZmPIF3 is a ortholog of Arabidopsis PIF3; nuclear localized protein, transgenic expression in rice suggest role in stress response.
- ZmPIFs in regulating light signaling and photomorphogenesis in maize.
- Knockout of ZmPIFs by CRISPR/Cas9 Causes Short Mesocotyls in Maize under Darkness.
- ZmPIFs Act as Positive Regulators in Response to Shade.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100279991
- UniProt accessions: C4J1T2
- EMBL: BT084779 , CM000784 , KJ726959
- EnsemblPlants: Zm00001eb332400_T001
- Gramene: Zm00001eb332400_T001
- ExpressionAtlas: Zm00001eb332400
- InterPro: IPR011598 , IPR036638 , IPR044273 , IPR047265
- PANTHER: PTHR46807 , PTHR46807:SF1
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- SMR: C4J1T2
- CDD: cd11445
Sequences
cDNA Sequence
- >Zm00001eb332400_T001
GAAAAATAATTGCCACTGTATGCCCAACTCAACTCCTAGCTAGGAGAGGAAGAAGAGTACAAGGAAGAGACTGTGGCAAGCACAGCACAGTGGATACACACCTAGCTTGGCCGGTACAGAGCACCGTGCTTGCTTGTCCATTTCCGTCACAGCTAGCGCTTGCCCAGGTCCCCCACCTTATCAACAACAACTGTGCCCCTCCTGCCCCCGCTCGCCGCGAGAGCTCCCGTCCCGACGACCTTCCCTCCTGTAGCACTCTACAGTCTACACCAAGCAGCAGCGTCTCCTGTTGCATGTTGCACTGCACCTATCTACGACGTCCGTTCCCAGTGCTTTGCTCACCGACACCGTATCTTATGAGCAAGGAGCCCTGCTGCTCCCATCACCTTCATCAAGCCAAGCGTGTGTCCTCTGTCCTCTCCCAGCTGCGAGCTCCGACCCCCGGCACCATGTCCGACAGCAGCGACTTCGCCGAGCTGCTATGGGAGAACGGCCAGGCGGTGGTGCACGCGCGGACGAGGAAACACCCGCCCCAGCAGGCCGCCTTCCCGCCCTTCACCTTCACCTGCAGCAGCAGAGCTCAACAAAGGCAGCCGGTGCCGCCGCTGCTCAAGACGGGAGGAGGTCTCTTTGCCGACTTCTCCTCGGCCACCGCCGGCCTAGACGCCCCCCGTGACAACGCCGACCTCGACGACACCGTGCCGTGGATCCACTACCCCATCCCCATCGTCGACGAAGCCAGTCCCGCCGCGCCTGCCCTGGCAGATAGCTTCATCCCAGATTTCTTCTCGGAGCTGCATGCGGCGGCGGCGACGACGAGCCTCGGCCCTCTGCCACCACCACCACCACCACCACCAGCAGTCCAGCACACCGGCGACGACAACGACAACCGGAGCACCCCGGTTCCCAATCCCACCACCGGCAGAGGACCAGAGCCCTCAAAGGAAACCCACCGCGCACCAGTACCAGGTCCAGCCGGCAGGCCTGAGCCACAACCACAAGCTGAGCTCGCGCCCGCCAGGAAGCCTCGGCAGGAGAGCGGCGGCGGGGAGGCTTTGATGAACTTCTCCATCTTCTCTAGGCCGGCAGCCATGGCGCGTGCCAGCCTGCGGCAGAGGCCGCCACAGACAGGCACCGACAAGGCGTCCAATGCCACCACGAGCACCCGCGTGGAGTCGACGGTGCTACAGTCGGCCAGTGCCAGTGGGCCGAGAACTGCAGCTGCCCCCGCCGTGTTCGTGGACCAGAGGACGGCGTGGCCGTCGCAGCAGCCCAAGGAGGTGCGGTTTCCATGCGCAGCAGCAGCGCCACCGCCGACGCCGACGGCTGGTAACCTGCAGCAAGAAAGACCTAGCAACAACAACATGACTCCTCCGCAGAAAGAAGTAGAGACCAGGAAGGCGTCAGAGGCTGCGGGCGCCACCGCCACCTCATCGGTCTGCTCCGGCAATGGTGCTGGGACAGGAAAGGACGACGAGTCCTGGCGCCAACAGAAGAGGAAGACCCTGCAGGCCGAGTGTTCCGCGAGTCAAGATGATGATCCTGACGATGAGTCCGGTGGGATGAGAAGATCGTGCAGCAGAGGTGCGAAGCGCAGCCGCACCGCGGAGGTGCACAACCTGTCCGAAAGGAGGAGAAGGGACAGGATCAATGAAAAAATGCGTGCCCTGCAAGAGCTCATCCCCAACTGCAACAAGATTGACAAGGCCTCCATGCTGGACGAAGCGATCGAGTACCTCAAAACCCTCCAGCTTCAAGTGCAGATGATGTCCATGGGAAGTGGGCTGTGCATTCCTCCCATGCTGCTGCCACCAGCCATGCAGCACCTGCAGATTCCTCCGGCTGCTGCTCACTTCCCTCATCTCGGCATGGGATTGGGTTACGGGATGGGTGTCCTCGATATGAACAGCGCGGCGGCGGCGGCGGCGGCGGTTCCATTTCCGCACATGCCCGGTGCTCACTTCCCTTGCCCGATGATCCCAGGCGCGCCACTACCACGGGGTCTCGGAATCGGAATGCCTGCCAGAAACACGATGCCGGTGTTCGGAGTCCCTCCTGGGCAACCAATCCAGCCACCATTCCCATCTTTGGCGGGCCTTCCTGTCAGGCCAAACCTGGCACCTCCTCACGCCTCCTCAGCCGCCATGGCTAACATGGTGCAGGAGCAACAGCAGCAGCAGCAGCATCAGAGCCTGAATAATGGAGCATCAACAGCAGCAGCAACAGCATCAGATCCTCAGACTATCGTGCAGGCTGAGAGACAGCATTTTAGTGTGCCCTCTTCAGCACAAACCGAGAGCGATCAGTTTTTGGATGGTGGTGGCAACAGGGCTATTTGTACAGGAAGAAATGAGGCTGAAACATGAAAAACACTCAGCAGGTCTCGACTAACAGGCTGCAGATGTGAATATCAGCGCCAACTCATCCTGGAAAAGAGCCTAACGAGTTTCAAGATCCACGAAGCAGATCCGTCAGTTGAAAAGAGTCCAATCAATCAAGACAGGGCCATGACAGGACGTCTAGCTTTAGCGAGCTAAGATGCTCCTAAGTTTTGTGTCAAATGTAGATGGTAGATGGAACCTGGTTACAAGAAACATTTCTTGGCAGCCGGTGCTTTTTTTCTTTTTTTTTGGGATTCACTGAAGTTTTCTTGGATCAGTATGTCTTATTTCCTCAGGCATTCAGTGATCATATGCACAAAGATATTTGTGTCCATATACTGGCTCTGCTTTAACTATATCTCTTTGCAAATAATAACGAGCTAGCTAACAATTGTTCAAAGCTGCATGCTTAAGCAGATATGTAAC
CDS Sequence
- >Zm00001eb332400_T001
ATGTCCGACAGCAGCGACTTCGCCGAGCTGCTATGGGAGAACGGCCAGGCGGTGGTGCACGCGCGGACGAGGAAACACCCGCCCCAGCAGGCCGCCTTCCCGCCCTTCACCTTCACCTGCAGCAGCAGAGCTCAACAAAGGCAGCCGGTGCCGCCGCTGCTCAAGACGGGAGGAGGTCTCTTTGCCGACTTCTCCTCGGCCACCGCCGGCCTAGACGCCCCCCGTGACAACGCCGACCTCGACGACACCGTGCCGTGGATCCACTACCCCATCCCCATCGTCGACGAAGCCAGTCCCGCCGCGCCTGCCCTGGCAGATAGCTTCATCCCAGATTTCTTCTCGGAGCTGCATGCGGCGGCGGCGACGACGAGCCTCGGCCCTCTGCCACCACCACCACCACCACCACCAGCAGTCCAGCACACCGGCGACGACAACGACAACCGGAGCACCCCGGTTCCCAATCCCACCACCGGCAGAGGACCAGAGCCCTCAAAGGAAACCCACCGCGCACCAGTACCAGGTCCAGCCGGCAGGCCTGAGCCACAACCACAAGCTGAGCTCGCGCCCGCCAGGAAGCCTCGGCAGGAGAGCGGCGGCGGGGAGGCTTTGATGAACTTCTCCATCTTCTCTAGGCCGGCAGCCATGGCGCGTGCCAGCCTGCGGCAGAGGCCGCCACAGACAGGCACCGACAAGGCGTCCAATGCCACCACGAGCACCCGCGTGGAGTCGACGGTGCTACAGTCGGCCAGTGCCAGTGGGCCGAGAACTGCAGCTGCCCCCGCCGTGTTCGTGGACCAGAGGACGGCGTGGCCGTCGCAGCAGCCCAAGGAGGTGCGGTTTCCATGCGCAGCAGCAGCGCCACCGCCGACGCCGACGGCTGGTAACCTGCAGCAAGAAAGACCTAGCAACAACAACATGACTCCTCCGCAGAAAGAAGTAGAGACCAGGAAGGCGTCAGAGGCTGCGGGCGCCACCGCCACCTCATCGGTCTGCTCCGGCAATGGTGCTGGGACAGGAAAGGACGACGAGTCCTGGCGCCAACAGAAGAGGAAGACCCTGCAGGCCGAGTGTTCCGCGAGTCAAGATGATGATCCTGACGATGAGTCCGGTGGGATGAGAAGATCGTGCAGCAGAGGTGCGAAGCGCAGCCGCACCGCGGAGGTGCACAACCTGTCCGAAAGGAGGAGAAGGGACAGGATCAATGAAAAAATGCGTGCCCTGCAAGAGCTCATCCCCAACTGCAACAAGATTGACAAGGCCTCCATGCTGGACGAAGCGATCGAGTACCTCAAAACCCTCCAGCTTCAAGTGCAGATGATGTCCATGGGAAGTGGGCTGTGCATTCCTCCCATGCTGCTGCCACCAGCCATGCAGCACCTGCAGATTCCTCCGGCTGCTGCTCACTTCCCTCATCTCGGCATGGGATTGGGTTACGGGATGGGTGTCCTCGATATGAACAGCGCGGCGGCGGCGGCGGCGGCGGTTCCATTTCCGCACATGCCCGGTGCTCACTTCCCTTGCCCGATGATCCCAGGCGCGCCACTACCACGGGGTCTCGGAATCGGAATGCCTGCCAGAAACACGATGCCGGTGTTCGGAGTCCCTCCTGGGCAACCAATCCAGCCACCATTCCCATCTTTGGCGGGCCTTCCTGTCAGGCCAAACCTGGCACCTCCTCACGCCTCCTCAGCCGCCATGGCTAACATGGTGCAGGAGCAACAGCAGCAGCAGCAGCATCAGAGCCTGAATAATGGAGCATCAACAGCAGCAGCAACAGCATCAGATCCTCAGACTATCGTGCAGGCTGAGAGACAGCATTTTAGTGTGCCCTCTTCAGCACAAACCGAGAGCGATCAGTTTTTGGATGGTGGTGGCAACAGGGCTATTTGTACAGGAAGAAATGAGGCTGAAACATGA
Protein Sequence
- >Zm00001eb332400_P001
MSDSSDFAELLWENGQAVVHARTRKHPPQQAAFPPFTFTCSSRAQQRQPVPPLLKTGGGLFADFSSATAGLDAPRDNADLDDTVPWIHYPIPIVDEASPAAPALADSFIPDFFSELHAAAATTSLGPLPPPPPPPPAVQHTGDDNDNRSTPVPNPTTGRGPEPSKETHRAPVPGPAGRPEPQPQAELAPARKPRQESGGGEALMNFSIFSRPAAMARASLRQRPPQTGTDKASNATTSTRVESTVLQSASASGPRTAAAPAVFVDQRTAWPSQQPKEVRFPCAAAAPPPTPTAGNLQQERPSNNNMTPPQKEVETRKASEAAGATATSSVCSGNGAGTGKDDESWRQQKRKTLQAECSASQDDDPDDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLPPAMQHLQIPPAAAHFPHLGMGLGYGMGVLDMNSAAAAAAAVPFPHMPGAHFPCPMIPGAPLPRGLGIGMPARNTMPVFGVPPGQPIQPPFPSLAGLPVRPNLAPPHASSAAMANMVQEQQQQQQHQSLNNGASTAAATASDPQTIVQAERQHFSVPSSAQTESDQFLDGGGNRAICTGRNEAET