Gene Details:
- Gene ID: Zm00001eb247630
- Gene Symbol: ZmPAL3b pal9
- Gene Name: phenylalanine ammonia lyase9
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmPAL3b were significantly reduced in F4. Their expressions were thus decreased to 18, 62, and 71% of the expression values observed in the control line F2. The two first ones (ZmPAL3a and ZmPAL3e) were highly expressed in the F2 line in the below-ear internode at silking stage, while the third one (ZmPAL3b) was weakly expressed.
- Considering all genes involved in monolignol biosynthesis, investigations in F4 and F2 lignifying internodes have especially shown that the expressions of three ZmPAL genes.
- The ZmPAL3 genes are considered as those preferentially involved in the monolignol pathway. Other ZmPAL genes have been shown in the maize genome since the construction of the used macro-array, of which expression is thus not known, including two genes in close positions to the ZmPAL3a and ZmPAL3b genes.
Function-related keywords:
Literature:
- Investigating the unusually high cell wall digestibility of the old INRA early flint F4 maize inbred line DOI: 10.1016/j.jia.2023.02.016 ; PMID:
Related News:
Gene Resources:
- NCBI ID: LOC100273579
- UniProt accessions: B4FWE4
Sequences:
cDNA Sequence
- >Zm00001eb247630_T001
CAACCTACCCACCCCGATTGCCATGCCATGCCAGTCTCTGGCCCCCAACAACCTCCCTCTCCCACCGGTGGCCACGCTATTTAAGCCCGTGCTCCCCCCCACCGTTCTCCTCAGGAAGAGCCTAGCTAGCTTTCCCCAGCTCTTCTTCCACAGCACTGTCTGTCTGTCTGTCTCGCAATTAGCTGTACTAATCCGCTAGTGGCACTGCTGCTACTCTCGTGTACTCCCAGCTATCTCCTCTCTATACTCTTGTACGTACGCACGTGTCGCAACCGCAATGGAGTGCGAGACCGGGCTTGTCCGCTCCCTGAACGGCGAGGGCCTGTGCATGTCGGCGGCGGCGGCGGCGCCGCGCGCCGACGCCCTGAACTGGGGCAAGGCCGCGGAGGACCTGTCCGGGAGCCACCTGGACGAGGTGAAGCGGATGGTGGTGGAGTTCCGCGAGCCGCTGGTGAGGATCCAGGGCGCCAGCCTGAGCATCGGGCAGGTGGCCGCGTCAAGGCCAGCAGCGACTGGGTCATGAGCAGCATGATGAACGGCACCGACAGCTACGGCGTCACCACCGGCTTCGGCGCCACGTCGCACAGGAGGACCAAGGAGGGCGGCGCGCTCCAGAGGGAGCTCATCAGATTCCTCAATGCTGGCGCGTTCGGCACCGGCGCCGACGGCCACGTGCTGCCGGCCGAGGCCACGCGCGCGGCGATGCTCGTGCGCATCAACACCCTCCTCCAGGGCTACTCCGGCATCCGCTTCGAGATTCTGGAGGCCATCGCCAAGCTGCTCAACGCCAACGTCACGCCGTGCCTGCCGCTCCGGGGCACCATCACCGCGTCGGGCGACCTCGTCCCGCTCTCCTACATCGCCGGCCTCATCACGGGCCGCCAGAACTCCGTCGCGGTGGGCCCCGACGGCAGGAAGGTGGGCGCCGCCGAGGCGTTCAGGATCGCCGGCATCGAGCACGGGTTCTTCGAGCTGCAGCCCAAGGAGGGCCTCGCCATGGTCAACGGCACCGCCGTGGGCTCCGGCCTCGCCTCCACCGTGCTCTTCGAGGCCAACGTTCTCGCCGTCATGGCCGAGGTCATCTCCGCGGTGTTCTGCGAGGTCATGACCGGCAAGCCCGAGTTCACCGACCACCTGACGCACAAGCTGAAGCACCACCCCGGACAGATCGAGGCCGCCGCTATCATGGAGCACGTCCTGGAAGGCAGCTCGTACATGAAGCTGGCCAAGAAGCTCGGCGAGCTCGACCCGCTGATGAAGCCGAAGCAGGACAGATACGCGCTCCGCACCTCCCCGCAGTGGCTGGGCCCGCAGATCGAAGTGATCCGCTTTGCCACCAAGTCCATCGAGCGCGAGATCAACTCCGTCAACGACAACCCGCTCATCGATGTGTCCCGTGGCAAGGCGCTCCACGGCGGCAACTTCCAGGGAACTCCCATCGGCGTGTCCATGGACAACACCCGTCTCGCGCTCGCCGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTGGTGAACGACTACTACAACAACGGCCTCCCGTCCAACCTGTCCGGCGGGCGCAACCCCAGCTTGGACTACGGCTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCGGAGCTCCAGTTCCTGGGCAACCCGGTGACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTCCCTGGGCCTCATCTCGTCCAGGAAGACCGCCGAGGCAGTGGACATCCTGAAGCTGATGACGTCCACGTTCCTGATCGCGCTGTGCCAGGCCATCGACCTGCGGCACCTCGAGGAGAACGTGAAGGCCGCGGTGAAGAACTGCGTGACGCAGGTGGCCAAGAAGTCGCTGAGCCTGAACGCCCGGGGCGGGCTCCACAACGCGCGCTTCTGCGAGAAGGACCTGCAGACGGCGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCCCAACTACCCGCTGATGCAGAAGCTCCGCGCGGTGCTGGTCGAGCACGCGCTGGCCAACGGCGACGCCGAGCGCGCCGCGGAGACGTCCATCTTCGCCAAGGTGGCCGAGTTCGAGCAGCAGGTCCGCGCGGCGCTGCCCAAGGAGGTGGAGGCCGCGCGCGCGGCCGTGGAGAGCGGCAGCCCCCTGGTCCCCAACAGGATCAGGGAGTGCCGGTCCTACCCGCTGTACCGGTTCGTGCGCGAGGACGTCGGCACCGAGTACCTGACCGGCGAGAGGACCAGGTCCCCCGGCGAGGAGCTCAACAAGGTGCTCGTGGCCATCAACCAGCGCAAGCACATCGACCCGCTGCTCGAGTGCCTCAAGGAGTGGAACGGCGCGCCCCTGCCGCTCTGCTGAGCTCAGCTGCACGCACCTGCTCCGCACAAAGAAGGAAAAAACAAAAGTATAGCGGCTCAAGACAGTGTTTCAAGATCGTTTATTTACAACCAGACTAGCAGAAGATGCTCTCTATATCTACCGTCGCCTTGTATTATTAGTAGCTGAAGTAAGTTCATGTGAATGTTGTCGTGTTCCCGCAGCTGCGACGCCACAGCGTGCGACGTGCGCGTTCTTGTCTGTCGCAGCTGCTGAAACTTTTGATGGTTTTTTAACTTGTAAGCTGGGA - >Zm00001eb247630_T002
CAACCTACCCACCCCGATTGCCATGCCATGCCAGTCTCTGGCCCCCAACAACCTCCCTCTCCCACCGGTGGCCACGCTATTTAAGCCCGTGCTCCCCCCCACCGTTCTCCTCAGGAAGAGCCTAGCTAGCTTTCCCCAGCTCTTCTTCCACAGCACTGTCTGTCTGTCTGTCTCGCAATTAGCTGTACTAATCCGCTAGTGGCACTGCTGCTACTCTCGTGTACTCCCAGCTATCTCCTCTCTATACTCTTGTACGTACGCACGTGTCGCAACCGCAATGGAGTGCGAGACCGGGCTTGTCCGCTCCCTGAACGGCGAGGGCCTGTGCATGTCGGCGGCGGCGGCGGCGCCGCGCGCCGACGCCCTGAACTGGGGCAAGGCCGCGGAGGACCTGTCCGGGAGCCACCTGGACGAGGTGAAGCGGATGGTGGTGGAGTTCCGCGAGCCGCTGGTGAGGATCCAGGGCGCCAGCCTGAGCATCGGGCAGGTGGCCGCGTCAAGGCCAGCAGCGACTGGGTCATGAGCAGCATGATGAACGGCACCGACAGCTACGGCGTCACCACCGGCTTCGGCGCCACGTCGCACAGGAGGACCAAGGAGGGCGGCGCGCTCCAGAGGGAGCTCATCAGATTCCTCAATGCTGGCGCGTTCGGCACCGGCGCCGACGGCCACGTGCTGCCGGCCGAGGCCACGCGCGCGGCGATGCTCGTGCGCATCAACACCCTCCTCCAGGGCTACTCCGGCATCCGCTTCGAGATTCTGGAGGCCATCGCCAAGCTGCTCAACGCCAACGTCACGCCGTGCCTGCCGCTCCGGGGCACCATCACCGCGTCGGGCGACCTCGTCCCGCTCTCCTACATCGCCGGCCTCATCACGGGCCGCCAGAACTCCGTCGCGGTGGGCCCCGACGGCAGGAAGGTGGGCGCCGCCGAGGCGTTCAGGATCGCCGGCATCGAGCACGGGTTCTTCGAGCTGCAGCCCAAGGAGGGCCTCGCCATGGTCAACGGCACCGCCGTGGGCTCCGGCCTCGCCTCCACCGTGCTCTTCGAGGCCAACGTTCTCGCCGTCATGGCCGAGGTCATCTCCGCGGTGTTCTGCGAGGTCATGACCGGCAAGCCCGAGTTCACCGACCACCTGACGCACAAGCTGAAGCACCACCCCGGACAGATCGAGGCCGCCGCTATCATGGAGCACGTCCTGGAAGGCAGCTCGTACATGAAGCTGGCCAAGAAGCTCGGCGAGCTCGACCCGCTGATGAAGCCGAAGCAGGACAGATACGCGCTCCGCACCTCCCCGCAGTGGCTGGGCCCGCAGATCGAAGTGATCCGCTTTGCCACCAAGTCCATCGAGCGCGAGATCAACTCCGTCAACGACAACCCGCTCATCGATGTGTCCCGTGGCAAGGCGCTCCACGGCGGCAACTTCCAGGGAACTCCCATCGGCGTGTCCATGGACAACACCCGTCTCGCGCTCGCCGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTGGTGAACGACTACTACAACAACGGCCTCCCGTCCAACCTGTCCGGCGGGCGCAACCCCAGCTTGGACTACGGCTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCGGAGCTCCAGTTCCTGGGCAACCCGGTGACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTCCCTGGGCCTCATCTCGTCCAGGAAGACCGCCGAGGCAGTGGACATCCTGAAGCTGATGACGTCCACGTTCCTGATCGCGCTGTGCCAGGCCATCGACCTGCGGCACCTCGAGGAGAACGTGAAGGCCGCGGTGAAGAACTGCGTGACGCAGGTGGCCAAGAAGTCGCTGAGCCTGAACGCCCGGGGCGGGCTCCACAACGCGCGCTTCTGCGAGAAGGACCTGCAGACGGCGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCCCAACTACCCGCTGATGCAGAAGCTCCGCGCGGTGCTGGTCGAGCACGCGCTGGCCAACGGCGACGCCGAGCGCGCCGCGGAGACGTCCATCTTCGCCAAGGTGGCCGAGTTCGAGCAGCAGGTCCGCGCGGCGCTGCCCAAGGAGGTGGAGGCCGCGCGCGCGGCCGTGGAGAGCGGCAGCCCCCTGGTCCCCAACAGGATCAGGGAGTGCCGGTCCTACCCGCTGTACCGGTTCGTGCGCGAGGACGTCGGCACCGAGTACCTGACCGGCGAGAGGACCAGGTCCCCCGGCGAGGAGCTCAACAAGGTGCTCGTGGCCATCAACCAGCGCAAGCACATCGACCCGCTGCTCGAGTGCCTCAAGGAGTGGAACGGCGCGCCCCTGCCGCTCTGCTGAGCTCAGCTGCACGCACCTGCTCCGCACAAAGAAGGAAAAAACAAAAGTATAGCGGCTCAAGACAGTGTTTCAAGATCGTTTATTTACAACCAGACTAGCAGAAGATGCTCTCTATATCTACCGTCGCCTTGTATTATTAGTAGCTGAAGTAAGTTCATGTGAATGTTGTCGTGTTCCCGCAGCTGCGACGCCACAGCGTGCGACGTGCGCGTTCTTGTCTGTCGCAGCTGCTGAAACTTTTGATGGTTTTTTAACTTGTAAGCTGGGA
CDS Sequence
- >Zm00001eb247630_T001
ATGAGCAGCATGATGAACGGCACCGACAGCTACGGCGTCACCACCGGCTTCGGCGCCACGTCGCACAGGAGGACCAAGGAGGGCGGCGCGCTCCAGAGGGAGCTCATCAGATTCCTCAATGCTGGCGCGTTCGGCACCGGCGCCGACGGCCACGTGCTGCCGGCCGAGGCCACGCGCGCGGCGATGCTCGTGCGCATCAACACCCTCCTCCAGGGCTACTCCGGCATCCGCTTCGAGATTCTGGAGGCCATCGCCAAGCTGCTCAACGCCAACGTCACGCCGTGCCTGCCGCTCCGGGGCACCATCACCGCGTCGGGCGACCTCGTCCCGCTCTCCTACATCGCCGGCCTCATCACGGGCCGCCAGAACTCCGTCGCGGTGGGCCCCGACGGCAGGAAGGTGGGCGCCGCCGAGGCGTTCAGGATCGCCGGCATCGAGCACGGGTTCTTCGAGCTGCAGCCCAAGGAGGGCCTCGCCATGGTCAACGGCACCGCCGTGGGCTCCGGCCTCGCCTCCACCGTGCTCTTCGAGGCCAACGTTCTCGCCGTCATGGCCGAGGTCATCTCCGCGGTGTTCTGCGAGGTCATGACCGGCAAGCCCGAGTTCACCGACCACCTGACGCACAAGCTGAAGCACCACCCCGGACAGATCGAGGCCGCCGCTATCATGGAGCACGTCCTGGAAGGCAGCTCGTACATGAAGCTGGCCAAGAAGCTCGGCGAGCTCGACCCGCTGATGAAGCCGAAGCAGGACAGATACGCGCTCCGCACCTCCCCGCAGTGGCTGGGCCCGCAGATCGAAGTGATCCGCTTTGCCACCAAGTCCATCGAGCGCGAGATCAACTCCGTCAACGACAACCCGCTCATCGATGTGTCCCGTGGCAAGGCGCTCCACGGCGGCAACTTCCAGGGAACTCCCATCGGCGTGTCCATGGACAACACCCGTCTCGCGCTCGCCGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTGGTGAACGACTACTACAACAACGGCCTCCCGTCCAACCTGTCCGGCGGGCGCAACCCCAGCTTGGACTACGGCTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCGGAGCTCCAGTTCCTGGGCAACCCGGTGACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTCCCTGGGCCTCATCTCGTCCAGGAAGACCGCCGAGGCAGTGGACATCCTGAAGCTGATGACGTCCACGTTCCTGATCGCGCTGTGCCAGGCCATCGACCTGCGGCACCTCGAGGAGAACGTGAAGGCCGCGGTGAAGAACTGCGTGACGCAGGTGGCCAAGAAGTCGCTGAGCCTGAACGCCCGGGGCGGGCTCCACAACGCGCGCTTCTGCGAGAAGGACCTGCAGACGGCGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCCCAACTACCCGCTGATGCAGAAGCTCCGCGCGGTGCTGGTCGAGCACGCGCTGGCCAACGGCGACGCCGAGCGCGCCGCGGAGACGTCCATCTTCGCCAAGGTGGCCGAGTTCGAGCAGCAGGTCCGCGCGGCGCTGCCCAAGGAGGTGGAGGCCGCGCGCGCGGCCGTGGAGAGCGGCAGCCCCCTGGTCCCCAACAGGATCAGGGAGTGCCGGTCCTACCCGCTGTACCGGTTCGTGCGCGAGGACGTCGGCACCGAGTACCTGACCGGCGAGAGGACCAGGTCCCCCGGCGAGGAGCTCAACAAGGTGCTCGTGGCCATCAACCAGCGCAAGCACATCGACCCGCTGCTCGAGTGCCTCAAGGAGTGGAACGGCGCGCCCCTGCCGCTCTGCTGA - >Zm00001eb247630_T002
ATGAGCAGCATGATGAACGGCACCGACAGCTACGGCGTCACCACCGGCTTCGGCGCCACGTCGCACAGGAGGACCAAGGAGGGCGGCGCGCTCCAGAGGGAGCTCATCAGATTCCTCAATGCTGGCGCGTTCGGCACCGGCGCCGACGGCCACGTGCTGCCGGCCGAGGCCACGCGCGCGGCGATGCTCGTGCGCATCAACACCCTCCTCCAGGGCTACTCCGGCATCCGCTTCGAGATTCTGGAGGCCATCGCCAAGCTGCTCAACGCCAACGTCACGCCGTGCCTGCCGCTCCGGGGCACCATCACCGCGTCGGGCGACCTCGTCCCGCTCTCCTACATCGCCGGCCTCATCACGGGCCGCCAGAACTCCGTCGCGGTGGGCCCCGACGGCAGGAAGGTGGGCGCCGCCGAGGCGTTCAGGATCGCCGGCATCGAGCACGGGTTCTTCGAGCTGCAGCCCAAGGAGGGCCTCGCCATGGTCAACGGCACCGCCGTGGGCTCCGGCCTCGCCTCCACCGTGCTCTTCGAGGCCAACGTTCTCGCCGTCATGGCCGAGGTCATCTCCGCGGTGTTCTGCGAGGTCATGACCGGCAAGCCCGAGTTCACCGACCACCTGACGCACAAGCTGAAGCACCACCCCGGACAGATCGAGGCCGCCGCTATCATGGAGCACGTCCTGGAAGGCAGCTCGTACATGAAGCTGGCCAAGAAGCTCGGCGAGCTCGACCCGCTGATGAAGCCGAAGCAGGACAGATACGCGCTCCGCACCTCCCCGCAGTGGCTGGGCCCGCAGATCGAAGTGATCCGCTTTGCCACCAAGTCCATCGAGCGCGAGATCAACTCCGTCAACGACAACCCGCTCATCGATGTGTCCCGTGGCAAGGCGCTCCACGGCGGCAACTTCCAGGGAACTCCCATCGGCGTGTCCATGGACAACACCCGTCTCGCGCTCGCCGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTGGTGAACGACTACTACAACAACGGCCTCCCGTCCAACCTGTCCGGCGGGCGCAACCCCAGCTTGGACTACGGCTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCGGAGCTCCAGTTCCTGGGCAACCCGGTGACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTCCCTGGGCCTCATCTCGTCCAGGAAGACCGCCGAGGCAGTGGACATCCTGAAGCTGATGACGTCCACGTTCCTGATCGCGCTGTGCCAGGCCATCGACCTGCGGCACCTCGAGGAGAACGTGAAGGCCGCGGTGAAGAACTGCGTGACGCAGGTGGCCAAGAAGTCGCTGAGCCTGAACGCCCGGGGCGGGCTCCACAACGCGCGCTTCTGCGAGAAGGACCTGCAGACGGCGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCCCAACTACCCGCTGATGCAGAAGCTCCGCGCGGTGCTGGTCGAGCACGCGCTGGCCAACGGCGACGCCGAGCGCGCCGCGGAGACGTCCATCTTCGCCAAGGTGGCCGAGTTCGAGCAGCAGGTCCGCGCGGCGCTGCCCAAGGAGGTGGAGGCCGCGCGCGCGGCCGTGGAGAGCGGCAGCCCCCTGGTCCCCAACAGGATCAGGGAGTGCCGGTCCTACCCGCTGTACCGGTTCGTGCGCGAGGACGTCGGCACCGAGTACCTGACCGGCGAGAGGACCAGGTCCCCCGGCGAGGAGCTCAACAAGGTGCTCGTGGCCATCAACCAGCGCAAGCACATCGACCCGCTGCTCGAGTGCCTCAAGGAGTGGAACGGCGCGCCCCTGCCGCTCTGCTGA
Protein Sequence
- >Zm00001eb247630_P001
MSSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVGPDGRKVGAAEAFRIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAVMAEVISAVFCEVMTGKPEFTDHLTHKLKHHPGQIEAAAIMEHVLEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMTSTFLIALCQAIDLRHLEENVKAAVKNCVTQVAKKSLSLNARGGLHNARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDAERAAETSIFAKVAEFEQQVRAALPKEVEAARAAVESGSPLVPNRIRECRSYPLYRFVREDVGTEYLTGERTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGAPLPLC - >Zm00001eb247630_P002
MSSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVGPDGRKVGAAEAFRIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAVMAEVISAVFCEVMTGKPEFTDHLTHKLKHHPGQIEAAAIMEHVLEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMTSTFLIALCQAIDLRHLEENVKAAVKNCVTQVAKKSLSLNARGGLHNARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDAERAAETSIFAKVAEFEQQVRAALPKEVEAARAAVESGSPLVPNRIRECRSYPLYRFVREDVGTEYLTGERTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGAPLPLC
Source: Genetic information comes from the article