Information report for ZmLRT
Gene Details
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Functional Descriptions
- Fine-mapping and functional analysis determined that the candidate gene for qLRT5-1, ZmLRT, expresses the primary transcript for the microRNA miR166a.
- Positional cloning and characterization reveal the role of a miRNA precursor gene ZmLRT in the regulation of lateral root number and drought tolerance in maize
- ZmLRT was highly expressed in root tips and lateral root primordia, and knockout and overexpression of ZmLRT increased and decreased lateral root number.
- Knockout of ZmLRT enhanced drought tolerance of maize seedlings.
- ZmLRT in the regulation of lateral root number and drought tolerance in maize.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100275467
- UniProt accessions: A0A804PKD7
- EnsemblPlants: Zm00001eb248920_T001 , Zm00001eb248920_T002
- Gramene: Zm00001eb248920_T001 , Zm00001eb248920_T002
Sequences
cDNA Sequence
- >Zm00001eb248920_T002
CCCCCACCCTCCTTTATAGATACCAATGGAGCGTCGTCCTCGCCAGCTCTAGCCTCTGGCGTTTGGCAGCCGAGTCATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGATGCTAGCATCAGTCCAAAGAAACATGAAATCAAACAGGTAGCTAATGATATTGGTCTTTTTGTCCGTTGGTACCATTTTTTTTTAAAAAAAAGGTCCCTTGGCAAAATGGTTTTGGAAAGTTGAAGGTTTCCTTGTTGTAGGGGCCAGGAACCAACTGCAACCGGTGAAGTGAAGCAGTTGAGCAAGACAGTACAGTCGTGTTCAAGCGTGGAATTATCCAACGGCAAGTACCATTATTAACTTGTGGAAAGAGATAATTAGGTGTACCAAAAGCCCTAGAGTGCTAAGCTAGAATAGCATGATGGTTTGGGTTGTCCTTCGTGTGCACTAGTGCTCTCGGTGGAATGCAAGTTTCAGATCCCATTCAATTGATTGTTTCCATTCATTCCTATTCATGGCTACAGCTATACAGTATATATATTTCCTTGGAACGTACTCCGAAAAACTCCAGGTAGTTTCAGAATTAGATGGGCCGGGATGAGGAACTAGACTACTAGAGTATATCCTTGGGGCCCAATGCTACTGGTATTACGTAATTTCTCATTCTCACTGTGCCTCGGAGGTTTTAGCTAGTATTGATACTTATTTCAGCTTATTTGTAATCCCAAAATGCTATTTTATCCTTCTACCTTTTCTTCATAATCCAACTTATATACTCTAGCAGAGAAACAACAAGGCCTAAAATGCCCCCTCTCCACTCTCTCTCTTCGTAGGATGTGTTGATATCCTGAAGGAAAGAAGCCAGAATAAAAACATGATGCGAAGAAACGGCACTACACCAGCATACCAGCATTTTACGTTGTGTTCCATCGTATCCAAATATATAAAGAACTGGCATCCTGCGATTGTGTATATACTCCTTCCAAGCAGGATGAAAACACGACAGATAAATTGACAGTAGTAGTGTGCTATCGGTAATGCCACTACATTTGTTTAGCGGCGATCTGTATCTCATGGATAAAAATAGTCCATCTTATAGAAATATGTTAATAAAGATTAAACGTGTGTTAATTACATACTAACAAGAACAAGAGCATTTTCATCAGATTTCTC - >Zm00001eb248920_T001
CCCCCACCCTCCTTTATAGATACCAATGGAGCGTCGTCCTCGCCAGCTCTAGCCTCTGGCGTTTGGCAGCCGAGTCATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGATGCTAGCATCAGTCCAAAGAAACATGAAATCAAACAGGTAGCTAATGATATTGGTCTTTTTGTCCGTTGGTACCATTTTTTTTTAAAAAAAAGGTCCCTTGGCAAAATGGTTTTGGAAAGTTGAAGGTTTCCTTGTTGTAGGGGCCAGGAACCAACTGCAACCGGTGAAGTGAAGCAGTTGAGCAAGACAGTACAGTCGTGTTCAAGCGTGGAATTATCCAACGGCAAGTACCATTATTAACTTGTGGAAAGAGATAATTAGGTGTACCAAAAGCCCTAGAGTGCTAAGCTAGAATAGCATGATGGTTTGGGTTGTCCTTCGTGTGCACTAGTGCTCTCGGTGGAATGCAAGTTTCAGATCCCATTCAATTGATTGTTTCCATTCATTCCTATTCATGGCTACAGCTATACAGTATATATATTTCCTTGGAACGTACTCCGAAAAACTCCAGGTAGTTTCAGAATTAGATGGGCCGGGATGAGGAACTAGACTACTAGAGTATATCCTTGGGGCCCAATGCTACTGGTATTACGTAATTTCTCATTCTCACTGTGCCTCGGAGGTTTTAGCTAGTATTGATACTTATTTCAGCTTATTTGTAATCCCAAAATGCTATTTTATCCTTCTACCTTTTCTTCATAATCCAACTTATATACTCTAGCAGAGAAACAACAAGGCCTAAAATGCCCCCTCTCCACTCTCTCTCTTCGTAGGATGTGTTGATATCCTGAAGGAAAGAAGCCAGAATAAAAACATGATGCGAAGAAACGGCACTACACCAGCATACCAGCATTTTACGTTGTGTTCCATCGTATCCAAATATATAAAGAACTGGCATCCTGCGATTGTGTATATACTCCTTCCAAGCAGGATGAAAACACGACAGATAAATTGACAGTAGTAGTGTGCTATCGGTAATGCCACTACATTTGTTTAGCGGCGATCTGTATCTCATGGATAAAAATAGTCCATCTTATAGAAATATGTTAATAAAGATTAAACGTGTGTTAATTACATACTAACAAGAACAAGAGCATTTTCATCAGATTTCTC
CDS Sequence
- >Zm00001eb248920_T002
ATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGA - >Zm00001eb248920_T001
ATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGA
Protein Sequence
- >Zm00001eb248920_P002
MWGKEQEEGRIRNLMQQIGEERRKLSYFEGNVVWLEVQKHTDLIGLGSCRSRTRLHSPQVELPGCSALVRPSIPPPVLALTDAGKCNQIKEVAVYTSILIYLLAGTATSWFPTFKGQYSTTFELNNFLCNLTCSGVLFFKKGQVMRCSPPIWVTNVTSLLLKIMSVHAVSTSKVSPYICIAGLICIVMAVLAVTNFTSSEAHDLPHARSTNLATRV - >Zm00001eb248920_P001
MWGKEQEEGRIRNLMQQIGEERRKLSYFEGNVVWLEVQKHTDLIGLGSCRSRTRLHSPQVELPGCSALVRPSIPPPVLALTDAGKCNQIKEVAVYTSILIYLLAGTATSWFPTFKGQYSTTFELNNFLCNLTCSGVLFFKKGQVMRCSPPIWVTNVTSLLLKIMSVHAVSTSKVSPYICIAGLICIVMAVLAVTNFTSSEAHDLPHARSTNLATRV