Gene Details:
- Gene ID: Zm00001eb248920
- Gene Symbol: ZmLRT
- Gene Name:
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Fine-mapping and functional analysis determined that the candidate gene for qLRT5-1, ZmLRT, expresses the primary transcript for the microRNA miR166a.
- Positional cloning and characterization reveal the role of a miRNA precursor gene ZmLRT in the regulation of lateral root number and drought tolerance in maize
- ZmLRT was highly expressed in root tips and lateral root primordia, and knockout and overexpression of ZmLRT increased and decreased lateral root number.
- Knockout of ZmLRT enhanced drought tolerance of maize seedlings.
- ZmLRT in the regulation of lateral root number and drought tolerance in maize.
Function-related keywords:
- seedlings , root , drought , tolerance , drought-tolerance , lateral-root , primary-root , root-number , lateral-root-number
Literature:
- Positional cloning and characterization reveal the role of a miRNA precursor gene ZmLRT in the regulation of lateral root number and drought tolerance in maize. DOI: 10.1111/jipb.13408 ; PMID: 36354146
Related News:
Gene Resources:
- NCBI ID: LOC100275467
- UniProt accessions: A0A804PKD7
Sequences:
cDNA Sequence
- >Zm00001eb248920_T002
CCCCCACCCTCCTTTATAGATACCAATGGAGCGTCGTCCTCGCCAGCTCTAGCCTCTGGCGTTTGGCAGCCGAGTCATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGATGCTAGCATCAGTCCAAAGAAACATGAAATCAAACAGGTAGCTAATGATATTGGTCTTTTTGTCCGTTGGTACCATTTTTTTTTAAAAAAAAGGTCCCTTGGCAAAATGGTTTTGGAAAGTTGAAGGTTTCCTTGTTGTAGGGGCCAGGAACCAACTGCAACCGGTGAAGTGAAGCAGTTGAGCAAGACAGTACAGTCGTGTTCAAGCGTGGAATTATCCAACGGCAAGTACCATTATTAACTTGTGGAAAGAGATAATTAGGTGTACCAAAAGCCCTAGAGTGCTAAGCTAGAATAGCATGATGGTTTGGGTTGTCCTTCGTGTGCACTAGTGCTCTCGGTGGAATGCAAGTTTCAGATCCCATTCAATTGATTGTTTCCATTCATTCCTATTCATGGCTACAGCTATACAGTATATATATTTCCTTGGAACGTACTCCGAAAAACTCCAGGTAGTTTCAGAATTAGATGGGCCGGGATGAGGAACTAGACTACTAGAGTATATCCTTGGGGCCCAATGCTACTGGTATTACGTAATTTCTCATTCTCACTGTGCCTCGGAGGTTTTAGCTAGTATTGATACTTATTTCAGCTTATTTGTAATCCCAAAATGCTATTTTATCCTTCTACCTTTTCTTCATAATCCAACTTATATACTCTAGCAGAGAAACAACAAGGCCTAAAATGCCCCCTCTCCACTCTCTCTCTTCGTAGGATGTGTTGATATCCTGAAGGAAAGAAGCCAGAATAAAAACATGATGCGAAGAAACGGCACTACACCAGCATACCAGCATTTTACGTTGTGTTCCATCGTATCCAAATATATAAAGAACTGGCATCCTGCGATTGTGTATATACTCCTTCCAAGCAGGATGAAAACACGACAGATAAATTGACAGTAGTAGTGTGCTATCGGTAATGCCACTACATTTGTTTAGCGGCGATCTGTATCTCATGGATAAAAATAGTCCATCTTATAGAAATATGTTAATAAAGATTAAACGTGTGTTAATTACATACTAACAAGAACAAGAGCATTTTCATCAGATTTCTC - >Zm00001eb248920_T001
CCCCCACCCTCCTTTATAGATACCAATGGAGCGTCGTCCTCGCCAGCTCTAGCCTCTGGCGTTTGGCAGCCGAGTCATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGATGCTAGCATCAGTCCAAAGAAACATGAAATCAAACAGGTAGCTAATGATATTGGTCTTTTTGTCCGTTGGTACCATTTTTTTTTAAAAAAAAGGTCCCTTGGCAAAATGGTTTTGGAAAGTTGAAGGTTTCCTTGTTGTAGGGGCCAGGAACCAACTGCAACCGGTGAAGTGAAGCAGTTGAGCAAGACAGTACAGTCGTGTTCAAGCGTGGAATTATCCAACGGCAAGTACCATTATTAACTTGTGGAAAGAGATAATTAGGTGTACCAAAAGCCCTAGAGTGCTAAGCTAGAATAGCATGATGGTTTGGGTTGTCCTTCGTGTGCACTAGTGCTCTCGGTGGAATGCAAGTTTCAGATCCCATTCAATTGATTGTTTCCATTCATTCCTATTCATGGCTACAGCTATACAGTATATATATTTCCTTGGAACGTACTCCGAAAAACTCCAGGTAGTTTCAGAATTAGATGGGCCGGGATGAGGAACTAGACTACTAGAGTATATCCTTGGGGCCCAATGCTACTGGTATTACGTAATTTCTCATTCTCACTGTGCCTCGGAGGTTTTAGCTAGTATTGATACTTATTTCAGCTTATTTGTAATCCCAAAATGCTATTTTATCCTTCTACCTTTTCTTCATAATCCAACTTATATACTCTAGCAGAGAAACAACAAGGCCTAAAATGCCCCCTCTCCACTCTCTCTCTTCGTAGGATGTGTTGATATCCTGAAGGAAAGAAGCCAGAATAAAAACATGATGCGAAGAAACGGCACTACACCAGCATACCAGCATTTTACGTTGTGTTCCATCGTATCCAAATATATAAAGAACTGGCATCCTGCGATTGTGTATATACTCCTTCCAAGCAGGATGAAAACACGACAGATAAATTGACAGTAGTAGTGTGCTATCGGTAATGCCACTACATTTGTTTAGCGGCGATCTGTATCTCATGGATAAAAATAGTCCATCTTATAGAAATATGTTAATAAAGATTAAACGTGTGTTAATTACATACTAACAAGAACAAGAGCATTTTCATCAGATTTCTC
CDS Sequence
- >Zm00001eb248920_T002
ATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGA - >Zm00001eb248920_T001
ATGTGGGGGAAAGAACAGGAGGAAGGCCGGATCCGGAATCTCATGCAGCAGATCGGGGAAGAAAGGAGGAAGCTTTCTTACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCAGAAACATACAGATCTCATCGGTCTAGGTTCTTGTCGATCTCGGACCAGGCTTCATTCCCCTCAAGTGGAGCTCCCGGGCTGTTCCGCGCTCGTACGTCCGTCGATTCCCCCTCCTGTTCTTGCCCTGACTGATGCAGGTAAATGCAACCAAATAAAGGAGGTAGCAGTATATACTTCTATTTTAATATACTTGTTGGCAGGGACAGCCACCAGCTGGTTTCCTACTTTTAAAGGTCAGTATAGTACTACGTTTGAGTTGAACAATTTCCTGTGCAACCTAACATGCAGTGGTGTCCTTTTTTTTAAGAAGGGACAGGTAATGCGCTGCAGCCCCCCTATATGGGTCACTAATGTCACAAGTTTACTGTTGAAGATTATGTCCGTGCATGCAGTAAGTACAAGCAAGGTCAGCCCATACATATGCATAGCAGGATTAATTTGTATTGTCATGGCAGTTTTAGCCGTCACTAACTTCACAAGTAGCGAAGCGCATGACCTGCCTCATGCCCGCAGTACTAATCTAGCTACCAGAGTATGA
Protein Sequence
- >Zm00001eb248920_P002
MWGKEQEEGRIRNLMQQIGEERRKLSYFEGNVVWLEVQKHTDLIGLGSCRSRTRLHSPQVELPGCSALVRPSIPPPVLALTDAGKCNQIKEVAVYTSILIYLLAGTATSWFPTFKGQYSTTFELNNFLCNLTCSGVLFFKKGQVMRCSPPIWVTNVTSLLLKIMSVHAVSTSKVSPYICIAGLICIVMAVLAVTNFTSSEAHDLPHARSTNLATRV - >Zm00001eb248920_P001
MWGKEQEEGRIRNLMQQIGEERRKLSYFEGNVVWLEVQKHTDLIGLGSCRSRTRLHSPQVELPGCSALVRPSIPPPVLALTDAGKCNQIKEVAVYTSILIYLLAGTATSWFPTFKGQYSTTFELNNFLCNLTCSGVLFFKKGQVMRCSPPIWVTNVTSLLLKIMSVHAVSTSKVSPYICIAGLICIVMAVLAVTNFTSSEAHDLPHARSTNLATRV
Source: Genetic information comes from the article