Gene Details:
- Gene ID: Zm00001eb119140
- Gene Symbol: ZmKOB1 kob1
- Gene Name: kobito1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmKOB1 shows differential expression of kernel weight per ear, kernel number per row and ear length; and encodes a glycosyltransferase-like protein, which is highly homologous to Arabidopsis ABA INSENSITIVE 8 (ABI8)/ELONGATION EFFECTIVE 1 (ELD1)/KOBITO1 (KOB1)43.
- Knockout ZmKOB1 had reduced kernel weight per ear, kernel number per row and ear length.
- Overexpression ZmKOB1 exhibited increased kernel weight per ear, kernel number per row and ear length.
- Zm00001d039284 shows differential expression of kernel weight per ear, kernel number per row and ear length; and encodes a glycosyltransferase-like protein, which is highly homologous to Arabidopsis ABA INSENSITIVE 8 (ABI8)/ELONGATION EFFECTIVE 1 (ELD1)/KOBITO1 (KOB1)43. We therefore named it Zea mays KOBITO1 (ZmKOB1).
- ZmKOB1 candidate gene for heterosis.
Function-related keywords:
Literature:
- Genomic insights into historical improvement of heterotic groups during modern hybrid maize breeding. DOI: 10.1038/s41477-022-01190-2 ; PMID: 35851624
Related News:
Gene Resources:
- NCBI ID: LOC100285082
- UniProt accessions: A0A804MXI5
Sequences:
cDNA Sequence
- >Zm00001eb119140_T002
CTCCGCGACTGTGCTGTTCTGTGCAGCCGTGCAGGGACGCCAACGACTCCGAGCTCTCCTCCATCCAACTCTCATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAGTTTTTCTTTCTTTTACTGTCTCTGCATAGCACCTATTGTTGTCCTGTGGGGTACAGGAAACTGTCACGAGTGGAAACAATTTCATTTTTCG - >Zm00001eb119140_T001
CTCCGCGACTGTGCTGTTCTGTGCAGCCGTGCAGGGACGCCAACGACTCCGAGCTCTCCTCCATCCAACTCTCATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAGTTTTTCTTTCTTTTACTGTCTCTGCATAGCACCTATTGTTGTCCTGTGGGGTACAGGAAACTGTCACGAGTGGAAACAATTTCATTTTTCG - >Zm00001eb119140_T003
CTCCGCGACTGTGCTGTTCTGTGCAGCCGTGCAGGGACGCCAACGACTCCGAGCTCTCCTCCATCCAACTCTCATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAGTTTTTCTTTCTTTTACTGTCTCTGCATAGCACCTATTGTTGTCCTGTGGGGTACAGGAAACTGTCACGAGTGGAAACAATTTCATTTTTCG
CDS Sequence
- >Zm00001eb119140_T002
ATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAG - >Zm00001eb119140_T001
ATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAG - >Zm00001eb119140_T003
ATGGCGGGCTACCGCGGGGGCTCCTCCGTCTCCGCCTCCACCGGCGGCGGGGGCAGCGCGGTGGCCGCAGCCTTCTCCACCCGGCTGCTGCTACTCCTCACGCTGCTGCCGCTCGCGCTCGCCGCCTTCGCCTTCGCGCTCCAGTGGCGCGGCGGTATGCGGGACCCGGCAGGTGCAGCCTGGCCCGCCGACGCGCAGCGCTTCCCGGGCATGGAGAACAGCCCCCTCTCCTCCTCCCACGGAGGAGCAGGCTCCTACTTCGCCGTCTCCTCCTCCTCCTCCTCCCCGGGAGCCGACTGCGCCGAGATCCTTGGCCGGAGCGCCGCGTCCTCCAATGGAATCTCGCTCTACCGCGGGTGGAGCTTCGACTCCGAATCTGCTATAACCCCCAAGATCTGTATCACGGGAAGCACATCTGCTAGCCTACACCAGATTCTTCCATGGTTGTATTATCACAAGGTCATTGGTGTTTCCCATTTCTTTCTTTTTGTTGAAGGAGAGGCTGCAAAGCCAGCTGTCACCTCTGTTCTTGAATCTATTCGGGGTGTAAAAATTATTTACAGAACTAAAGAACTGAAAGAGAAACAGGAGAAAAGCCGCATTTGGAATGAGACGTGGCTAGCAGGTTTCTTTTACAAGCCGTGTAATTACGAACTATTTGTCAAGCAATCACTAAACATGGAAATGGCTATTATTATGGCAAGGGATGCTGGAATGGATTGGATCATTCACCTCGATACTGATGAGTTGATTCATCCAGCTGGTGCCCGAGAGTACTCCCTGAGGCGATTGCTTTTAGATGTTCCTGACAATGTTGACATGGTTATCTTCCCCAATTATGAGAGCAGCATTGAACGTGATGACATTAAGGATCCTTTTACTGAGGTTTCCATGTTTAAGAAAAATTATGACCATCTTCCAAAGGATACATACTTTGGCCTGTACAAAGAAGCAACACGTGGTAATCCAAACTACTTCCTTACTTATGGTAATGGGAAATCAGCTGCAAGGGTTCAGGAGCATTTGCGACCGAACGGTGCTCATAGATGGCATAATTACATGAAATCCCCAAATGAAATCAAATTGGAGGAGGCTGCTATTCTGCATTACACCTACACAAAGTTCTCAGACCTAACCTCAAGGAGGGATAGATGCGGCTGCAAACCAACTAAAGAAGATGTGAAGCGATGTTTTATCTTGGAATTTGACCGTTTGGTGAGCTAG
Protein Sequence
- >Zm00001eb119140_P002
MAGYRGGSSVSASTGGGGSAVAAAFSTRLLLLLTLLPLALAAFAFALQWRGGMRDPAGAAWPADAQRFPGMENSPLSSSHGGAGSYFAVSSSSSSPGADCAEILGRSAASSNGISLYRGWSFDSESAITPKICITGSTSASLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIRGVKIIYRTKELKEKQEKSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELIHPAGAREYSLRRLLLDVPDNVDMVIFPNYESSIERDDIKDPFTEVSMFKKNYDHLPKDTYFGLYKEATRGNPNYFLTYGNGKSAARVQEHLRPNGAHRWHNYMKSPNEIKLEEAAILHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFILEFDRLVS - >Zm00001eb119140_P001
MAGYRGGSSVSASTGGGGSAVAAAFSTRLLLLLTLLPLALAAFAFALQWRGGMRDPAGAAWPADAQRFPGMENSPLSSSHGGAGSYFAVSSSSSSPGADCAEILGRSAASSNGISLYRGWSFDSESAITPKICITGSTSASLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIRGVKIIYRTKELKEKQEKSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELIHPAGAREYSLRRLLLDVPDNVDMVIFPNYESSIERDDIKDPFTEVSMFKKNYDHLPKDTYFGLYKEATRGNPNYFLTYGNGKSAARVQEHLRPNGAHRWHNYMKSPNEIKLEEAAILHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFILEFDRLVS - >Zm00001eb119140_P003
MAGYRGGSSVSASTGGGGSAVAAAFSTRLLLLLTLLPLALAAFAFALQWRGGMRDPAGAAWPADAQRFPGMENSPLSSSHGGAGSYFAVSSSSSSPGADCAEILGRSAASSNGISLYRGWSFDSESAITPKICITGSTSASLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIRGVKIIYRTKELKEKQEKSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELIHPAGAREYSLRRLLLDVPDNVDMVIFPNYESSIERDDIKDPFTEVSMFKKNYDHLPKDTYFGLYKEATRGNPNYFLTYGNGKSAARVQEHLRPNGAHRWHNYMKSPNEIKLEEAAILHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFILEFDRLVS
Source: Genetic information comes from the article