Gene Details:

Functional Descriptions:

  • ZmHKT1 was an important contributor to the phenotypic variations of seedling root traits in maize, these significant variants could use to develop functional markers to improve root traits.
  • We found that the maize salt tolerance gene ZmHKT1 may be involved in root development.
  • The gene displayed high level of nucleotide diversity, especially in non-genic regions. A total of 19 variations in untranslated region of ZmHKT1 were found to be associated with six seedling traits.
  • The genomic sequences of a salt tolerance gene ZmHKT1 was resequenced in 349 maize inbred lines, and the association between nucleotide polymorphisms and seedling root traits was detected.
  • In maize, ZmHKT1 has been associated with salt tolerance, but no studies have shown it to be associated with root development.
  • ZmHKT1 is required for Na+ homeostasis and salt tolerance in maize.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb130310_T002
    CACCTGGTGCTGTTCCATGTGCACCCGTTCTGGATCCAAGTCCTGTACTTCCTTTTGATCTCCGTTTTGGGTTTCTTGATGCTGAGAGTCCTGCCCATGAAGTCCAGCTCCGTGCCTAGGCCCTCGGCTCTGGACCTACTCTTCACGTCGGTGTCGGCGACGACAGTCTCCAGCATGATCGCCGTCGAGATGGAATCCTTCTCTAACGCGCAGCTCCTCCTCATGACCCTCCTTATGCTCCTCGGGGGCGAGGTGTTCACAAGCATGCTTGGTCTCCACTTCACCTGCACCAAGCTCAGAAACAAGAGAGAAACACCTCATAATAATCTCCATGGTAATAGCTTAGAGCAGAGTCGTCGTCGTCACCGTCCCATGGAGATGGAAGCCCAGGCCGCCGCCGTCCAAATGGAGCTTGCAGGGTTCAACAAGGACGGCCATGGCGATTTCGCATCCATGGCTAGCGTGGTCGGCAGCGCGAGAGCAGTGCTTGTTAGGAAGAGGATCAGCCTGAGCACCTTCTCCGTCTTCACGGTCGTCTCGTCGTTCGCAAACTGTGGCTTCGTGCCAACCAACGAGGGGATGGTGTCCTTCAAGTCCTTCCCGGGCATGCTCCTCCTGGTCATGCCACACATCCTGCTCGGGAACACGCTCTTCCCCATCTTCCTCAGGCTCTCCATTACGGCGCTCGAGAGGGTCACAAGGTGGCGAGACCTCTGCGAGCTGCTGAGAGACAGAGGACCCGGCGGCGGGCCAGCTGCGGCTGCCGCCGCCGCCGCTATAGGCTACGACCACCTGCTCCCGGGACCGCGCACATGGTTCCTTGCTCTCACCGTGGCGGTGTTCCTGGCGGTGCAGCTGGTGCTCTACTGCGCCATGGAGTGGGGCTCCGGTGGCCTTGGAGGGCTCAACGCGTTCCAGAAGCTCGTTGCAGCGGTCTTCATGTCCGTCAACTCCAGGCACTCCGGCGAGATGGTCGTCGACCTCGCCACCGTCTCCTCCGCCGTCGTCGTGCTGTATGTGCTCATGATGTATCTACCGCCTTACACTACATTTTTACCGGTAGCAGTGGAAGACGACCAGCAGCAGCAAAATGAGGCACAACCCCACGACAATAGCACGAGCAAGAGCAGCACAAGTATTAGCATCTGGCACAATCTGCTCATGTCGCCGCTCTCGTGCCTAACCATCTTCATCGTCGTCATCTGCATCACCGAGAGGCGGCAGATTGCTCGTGACCCAATCAACTTCAGCGTCCTCAACATCGTCGTCGAGGTCATCAGTGCGTATGGCAACGTGGGATTCAGCACCGGGTACAGCTGCAGCAGGCAGGTGACGCCCGGCGGCGGCTGCTGCAAGGACGCGTGGGTTAGCTTGTCCGGCAAGTGGAGTGTGGAAGGGAAGCTCACGCTCATGGCCATCATGTTCTATGGCAGGCTCAAGAAGTTCAGCATGCTTGGGGGTCAGGCATGGAGGCTGAACTGAACCGAAGTACTATTTCGAAACTCGCTCGATCAACCTGATCTCCAGGACTCCAAGACTAGTACTTGAATTCTCAGTCTATTCAGACGGAACCGGATCATATGACAAATCCATCTGCGAGGAGTTTGGCTGCATTCTGTAAAGTCGGTAGGGGCAAGGGGTTGTTCATATCCTTTTTATTTAAAAATAAAAAATAGTTTTAT
  • >Zm00001eb130310_T001
    CACCTGGTGCTGTTCCATGTGCACCCGTTCTGGATCCAAGTCCTGTACTTCCTTTTGATCTCCGTTTTGGGTTTCTTGATGCTGAGAGTCCTGCCCATGAAGTCCAGCTCCGTGCCTAGGCCCTCGGCTCTGGACCTACTCTTCACGTCGGTGTCGGCGACGACAGTCTCCAGCATGATCGCCGTCGAGATGGAATCCTTCTCTAACGCGCAGCTCCTCCTCATGACCCTCCTTATGCTCCTCGGGGGCGAGGTGTTCACAAGCATGCTTGGTCTCCACTTCACCTGCACCAAGCTCAGAAACAAGAGAGAAACACCTCATAATAATCTCCATGGTAATAGCTTAGAGCAGAGTCGTCGTCGTCACCGTCCCATGGAGATGGAAGCCCAGGCCGCCGCCGTCCAAATGGAGCTTGCAGGGTTCAACAAGGACGGCCATGGCGATTTCGCATCCATGGCTAGCGTGGTCGGCAGCGCGAGAGCAGTGCTTGTTAGGAAGAGGATCAGCCTGAGCACCTTCTCCGTCTTCACGGTCGTCTCGTCGTTCGCAAACTGTGGCTTCGTGCCAACCAACGAGGGGATGGTGTCCTTCAAGTCCTTCCCGGGCATGCTCCTCCTGGTCATGCCACACATCCTGCTCGGGAACACGCTCTTCCCCATCTTCCTCAGGCTCTCCATTACGGCGCTCGAGAGGGTCACAAGGTGGCGAGACCTCTGCGAGCTGCTGAGAGACAGAGGACCCGGCGGCGGGCCAGCTGCGGCTGCCGCCGCCGCCGCTATAGGCTACGACCACCTGCTCCCGGGACCGCGCACATGGTTCCTTGCTCTCACCGTGGCGGTGTTCCTGGCGGTGCAGCTGGTGCTCTACTGCGCCATGGAGTGGGGCTCCGGTGGCCTTGGAGGGCTCAACGCGTTCCAGAAGCTCGTTGCAGCGGTCTTCATGTCCGTCAACTCCAGGCACTCCGGCGAGATGGTCGTCGACCTCGCCACCGTCTCCTCCGCCGTCGTCGTGCTGTATGTGCTCATGATGTATCTACCGCCTTACACTACATTTTTACCGGTAGCAGTGGAAGACGACCAGCAGCAGCAAAATGAGGCACAACCCCACGACAATAGCACGAGCAAGAGCAGCACAAGTATTAGCATCTGGCACAATCTGCTCATGTCGCCGCTCTCGTGCCTAACCATCTTCATCGTCGTCATCTGCATCACCGAGAGGCGGCAGATTGCTCGTGACCCAATCAACTTCAGCGTCCTCAACATCGTCGTCGAGGTCATCAGTGCGTATGGCAACGTGGGATTCAGCACCGGGTACAGCTGCAGCAGGCAGGTGACGCCCGGCGGCGGCTGCTGCAAGGACGCGTGGGTTAGCTTGTCCGGCAAGTGGAGTGTGGAAGGGAAGCTCACGCTCATGGCCATCATGTTCTATGGCAGGCTCAAGAAGTTCAGCATGCTTGGGGGTCAGGCATGGAGGCTGAACTGAACCGAAGTACTATTTCGAAACTCGCTCGATCAACCTGATCTCCAGGACTCCAAGACTAGTACTTGAATTCTCAGTCTATTCAGACGGAACCGGATCATATGACAAATCCATCTGCGAGGAGTTTGGCTGCATTCTGTAAAGTCGGTAGGGGCAAGGGGTTGTTCATATCCTTTTTATTTAAAAATAAAAAATAGTTTTAT
CDS Sequence
  • >Zm00001eb130310_T002
    ATGCTGAGAGTCCTGCCCATGAAGTCCAGCTCCGTGCCTAGGCCCTCGGCTCTGGACCTACTCTTCACGTCGGTGTCGGCGACGACAGTCTCCAGCATGATCGCCGTCGAGATGGAATCCTTCTCTAACGCGCAGCTCCTCCTCATGACCCTCCTTATGCTCCTCGGGGGCGAGGTGTTCACAAGCATGCTTGGTCTCCACTTCACCTGCACCAAGCTCAGAAACAAGAGAGAAACACCTCATAATAATCTCCATGGTAATAGCTTAGAGCAGAGTCGTCGTCGTCACCGTCCCATGGAGATGGAAGCCCAGGCCGCCGCCGTCCAAATGGAGCTTGCAGGGTTCAACAAGGACGGCCATGGCGATTTCGCATCCATGGCTAGCGTGGTCGGCAGCGCGAGAGCAGTGCTTGTTAGGAAGAGGATCAGCCTGAGCACCTTCTCCGTCTTCACGGTCGTCTCGTCGTTCGCAAACTGTGGCTTCGTGCCAACCAACGAGGGGATGGTGTCCTTCAAGTCCTTCCCGGGCATGCTCCTCCTGGTCATGCCACACATCCTGCTCGGGAACACGCTCTTCCCCATCTTCCTCAGGCTCTCCATTACGGCGCTCGAGAGGGTCACAAGGTGGCGAGACCTCTGCGAGCTGCTGAGAGACAGAGGACCCGGCGGCGGGCCAGCTGCGGCTGCCGCCGCCGCCGCTATAGGCTACGACCACCTGCTCCCGGGACCGCGCACATGGTTCCTTGCTCTCACCGTGGCGGTGTTCCTGGCGGTGCAGCTGGTGCTCTACTGCGCCATGGAGTGGGGCTCCGGTGGCCTTGGAGGGCTCAACGCGTTCCAGAAGCTCGTTGCAGCGGTCTTCATGTCCGTCAACTCCAGGCACTCCGGCGAGATGGTCGTCGACCTCGCCACCGTCTCCTCCGCCGTCGTCGTGCTGTATGTGCTCATGATGTATCTACCGCCTTACACTACATTTTTACCGGTAGCAGTGGAAGACGACCAGCAGCAGCAAAATGAGGCACAACCCCACGACAATAGCACGAGCAAGAGCAGCACAAGTATTAGCATCTGGCACAATCTGCTCATGTCGCCGCTCTCGTGCCTAACCATCTTCATCGTCGTCATCTGCATCACCGAGAGGCGGCAGATTGCTCGTGACCCAATCAACTTCAGCGTCCTCAACATCGTCGTCGAGGTCATCAGTGCGTATGGCAACGTGGGATTCAGCACCGGGTACAGCTGCAGCAGGCAGGTGACGCCCGGCGGCGGCTGCTGCAAGGACGCGTGGGTTAGCTTGTCCGGCAAGTGGAGTGTGGAAGGGAAGCTCACGCTCATGGCCATCATGTTCTATGGCAGGCTCAAGAAGTTCAGCATGCTTGGGGGTCAGGCATGGAGGCTGAACTGA
  • >Zm00001eb130310_T001
    ATGCTGAGAGTCCTGCCCATGAAGTCCAGCTCCGTGCCTAGGCCCTCGGCTCTGGACCTACTCTTCACGTCGGTGTCGGCGACGACAGTCTCCAGCATGATCGCCGTCGAGATGGAATCCTTCTCTAACGCGCAGCTCCTCCTCATGACCCTCCTTATGCTCCTCGGGGGCGAGGTGTTCACAAGCATGCTTGGTCTCCACTTCACCTGCACCAAGCTCAGAAACAAGAGAGAAACACCTCATAATAATCTCCATGGTAATAGCTTAGAGCAGAGTCGTCGTCGTCACCGTCCCATGGAGATGGAAGCCCAGGCCGCCGCCGTCCAAATGGAGCTTGCAGGGTTCAACAAGGACGGCCATGGCGATTTCGCATCCATGGCTAGCGTGGTCGGCAGCGCGAGAGCAGTGCTTGTTAGGAAGAGGATCAGCCTGAGCACCTTCTCCGTCTTCACGGTCGTCTCGTCGTTCGCAAACTGTGGCTTCGTGCCAACCAACGAGGGGATGGTGTCCTTCAAGTCCTTCCCGGGCATGCTCCTCCTGGTCATGCCACACATCCTGCTCGGGAACACGCTCTTCCCCATCTTCCTCAGGCTCTCCATTACGGCGCTCGAGAGGGTCACAAGGTGGCGAGACCTCTGCGAGCTGCTGAGAGACAGAGGACCCGGCGGCGGGCCAGCTGCGGCTGCCGCCGCCGCCGCTATAGGCTACGACCACCTGCTCCCGGGACCGCGCACATGGTTCCTTGCTCTCACCGTGGCGGTGTTCCTGGCGGTGCAGCTGGTGCTCTACTGCGCCATGGAGTGGGGCTCCGGTGGCCTTGGAGGGCTCAACGCGTTCCAGAAGCTCGTTGCAGCGGTCTTCATGTCCGTCAACTCCAGGCACTCCGGCGAGATGGTCGTCGACCTCGCCACCGTCTCCTCCGCCGTCGTCGTGCTGTATGTGCTCATGATGTATCTACCGCCTTACACTACATTTTTACCGGTAGCAGTGGAAGACGACCAGCAGCAGCAAAATGAGGCACAACCCCACGACAATAGCACGAGCAAGAGCAGCACAAGTATTAGCATCTGGCACAATCTGCTCATGTCGCCGCTCTCGTGCCTAACCATCTTCATCGTCGTCATCTGCATCACCGAGAGGCGGCAGATTGCTCGTGACCCAATCAACTTCAGCGTCCTCAACATCGTCGTCGAGGTCATCAGTGCGTATGGCAACGTGGGATTCAGCACCGGGTACAGCTGCAGCAGGCAGGTGACGCCCGGCGGCGGCTGCTGCAAGGACGCGTGGGTTAGCTTGTCCGGCAAGTGGAGTGTGGAAGGGAAGCTCACGCTCATGGCCATCATGTTCTATGGCAGGCTCAAGAAGTTCAGCATGCTTGGGGGTCAGGCATGGAGGCTGAACTGA
Protein Sequence
  • >Zm00001eb130310_P002
    MLRVLPMKSSSVPRPSALDLLFTSVSATTVSSMIAVEMESFSNAQLLLMTLLMLLGGEVFTSMLGLHFTCTKLRNKRETPHNNLHGNSLEQSRRRHRPMEMEAQAAAVQMELAGFNKDGHGDFASMASVVGSARAVLVRKRISLSTFSVFTVVSSFANCGFVPTNEGMVSFKSFPGMLLLVMPHILLGNTLFPIFLRLSITALERVTRWRDLCELLRDRGPGGGPAAAAAAAAIGYDHLLPGPRTWFLALTVAVFLAVQLVLYCAMEWGSGGLGGLNAFQKLVAAVFMSVNSRHSGEMVVDLATVSSAVVVLYVLMMYLPPYTTFLPVAVEDDQQQQNEAQPHDNSTSKSSTSISIWHNLLMSPLSCLTIFIVVICITERRQIARDPINFSVLNIVVEVISAYGNVGFSTGYSCSRQVTPGGGCCKDAWVSLSGKWSVEGKLTLMAIMFYGRLKKFSMLGGQAWRLN
  • >Zm00001eb130310_P001
    MLRVLPMKSSSVPRPSALDLLFTSVSATTVSSMIAVEMESFSNAQLLLMTLLMLLGGEVFTSMLGLHFTCTKLRNKRETPHNNLHGNSLEQSRRRHRPMEMEAQAAAVQMELAGFNKDGHGDFASMASVVGSARAVLVRKRISLSTFSVFTVVSSFANCGFVPTNEGMVSFKSFPGMLLLVMPHILLGNTLFPIFLRLSITALERVTRWRDLCELLRDRGPGGGPAAAAAAAAIGYDHLLPGPRTWFLALTVAVFLAVQLVLYCAMEWGSGGLGGLNAFQKLVAAVFMSVNSRHSGEMVVDLATVSSAVVVLYVLMMYLPPYTTFLPVAVEDDQQQQNEAQPHDNSTSKSSTSISIWHNLLMSPLSCLTIFIVVICITERRQIARDPINFSVLNIVVEVISAYGNVGFSTGYSCSRQVTPGGGCCKDAWVSLSGKWSVEGKLTLMAIMFYGRLKKFSMLGGQAWRLN

Source: Genetic information comes from the article