Information report for ZmGA20ox3;ZmGA20ox2.1
Gene Details
|
|
Functional Descriptions
- To accomplish this, we utilized a dominant, miRNA-based construct expressed in a hemizygous state to selectively reduce expression of the ZmGA20ox3 and ZmGA20ox5 genes that control GA biosynthesis primarily in vegetative tissues.
- ZmGA20ox3 and ZmGA20ox5 genes that control GA biosynthesis primarily in vegetative tissues.
- Targeted suppression of gibberellin biosynthetic genes ZmGA20ox3 and ZmGA20ox5 produces a short stature maize ideotype.
- These factors identified ZmGA20ox3 and ZmGA20ox5 as the most likely candidates for gene suppression to reduce GA levels in maize stems without impacting reproductive tissues.
- Suppression of ZmGA20ox3 and ZmGA20ox5 reduces the levels of bioactive GA.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC107521947
- UniProt accessions: A0A1D6N5E5
- EMBL: CM007649
- EnsemblPlants: Zm00001eb145600_T002
- Gramene: Zm00001eb145600_T002
- KEGG: zma:107521947
- OMA: FCDAMNG
- ExpressionAtlas: Zm00001eb145600
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A1D6N5E5
- SMR: A0A1D6N5E5
Sequences
cDNA Sequence
- >Zm00001eb145600_T001
GCACACTCGCAGCTCGCACATCTCATGGTGTCCTAAGAACGGCAAGAGCCAGCTCTGCCTAGCAGCAGCGCACAGCCACATCCATGGACGCCAGCCCGACCCCACCGCTCCCCCTCCGCGCCCCAACTCCCAGCATTGACCTCCCCGCTGGCAAGGACAGGGCCGACGCGGCGGCTAACAAGGCCGCGGCTGTGTTCGACCTGCGCCGGGAGCCCAAGATCCCGGAGCCATTCCTGTGGCCGCACGAAGAGGCGCGGCCGACCTCGGCCGCGGAGCTGGAGGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGGCGCGGGGCTCCGCCGCGCCGCGGCGCAAGTGGCGGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACGGCGTGGACGCGGCGCTGGGGCGCGCCGCGCTGGACGGCGCCAGCGACTTCTTCCGGCTGCCGCTGGCTGAGAAGCAGCGGGCCCGGCGCGTCCCCGGCACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGAGACCCTGTCCTTCGGCTTCCACGACGGCGCCGCGGCGCCCGTCGTCGTGGACTACTTCACCGGCACCCTCGGCCAAGATTTCGAGCCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGCGCGGCTACTACCGGGAGTTCTTCGAGGACAGCCGCTCCATCATGCGGACGACGTCGGCGGGCTGGAGGTCCTGGTGGACGGCGAGTGGCGCCCCGTCCGGCCCGTCCCAGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGCGCGGTGGTGAACCGGCGGCAGGAGCGGCAATCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGCCCGCCGGCCAGCGCCGCGCCGCGGCAGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTGGACGCCTTCACCCGCTGGCTCTCCCACGGCCCGGCGGCGGCGGCTCCCTGCACCTAACGAGCCGGCCGTCTCTTTCGCCGGGGCCCGCGCGGGGTTCGCCCACGTGGTGATCAGGTGGCAGACATGTGGCCCACGGGCCCCGCGCCGCCTTCCCCATTTTTGGACGACCCTACTGCTACTACTACTAGTGTACATATGCAAAAAAATACATATATATATAGGTACTTTCTCTAATATTTTTATATATAAGCAAGGCGGCCTGGTGTTCTTTTCTTTGTTTTGTCGACAACTGTTTGATCCCATCCTATGGACGATGGATAGTTCAATGT - >Zm00001eb145600_T002
GCACACTCGCAGCTCGCACATCTCATGGTGTCCTAAGAACGGCAAGAGCCAGCTCTGCCTAGCAGCAGCGCACAGCCACATCCATGGACGCCAGCCCGACCCCACCGCTCCCCCTCCGCGCCCCAACTCCCAGCATTGACCTCCCCGCTGGCAAGGACAGGGCCGACGCGGCGGCTAACAAGGCCGCGGCTGTGTTCGACCTGCGCCGGGAGCCCAAGATCCCGGAGCCATTCCTGTGGCCGCACGAAGAGGCGCGGCCGACCTCGGCCGCGGAGCTGGAGGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGGCGCGGGGCTCCGCCGCGCCGCGGCGCAAGTGGCGGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACGGCGTGGACGCGGCGCTGGGGCGCGCCGCGCTGGACGGCGCCAGCGACTTCTTCCGGCTGCCGCTGGCTGAGAAGCAGCGGGCCCGGCGCGTCCCCGGCACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGAGACCCTGTCCTTCGGCTTCCACGACGGCGCCGCGGCGCCCGTCGTCGTGGACTACTTCACCGGCACCCTCGGCCAAGATTTCGAGCCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGCGCGGCTACTACCGGGAGTTCTTCGAGGACAGCCGCTCCATCATGCGGACGACGTCGGCGGGCTGGAGGTCCTGGTGGACGGCGAGTGGCGCCCCGTCCGGCCCGTCCCAGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGCGCGGTGGTGAACCGGCGGCAGGAGCGGCAATCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGCCCGCCGGCCAGCGCCGCGCCGCGGCAGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTGGACGCCTTCACCCGCTGGCTCTCCCACGGCCCGGCGGCGGCGGCTCCCTGCACCTAACGAGCCGGCCGTCTCTTTCGCCGGGGCCCGCGCGGGGTTCGCCCACGTGGTGATCAGGTGGCAGACATGTGGCCCACGGGCCCCGCGCCGCCTTCCCCATTTTTGGACGACCCTACTGCTACTACTACTAGTGTACATATGCAAAAAAATACATATATATATAGGTACTTTCTCTAATATTTTTATATATAAGCAAGGCGGCCTGGTGTTCTTTTCTTTGTTTTGTCGACAACTGTTTGATCCCATCCTATGGACGATGGATAGTTCAATGT
CDS Sequence
- >Zm00001eb145600_T001
ATGGACGCCAGCCCGACCCCACCGCTCCCCCTCCGCGCCCCAACTCCCAGCATTGACCTCCCCGCTGGCAAGGACAGGGCCGACGCGGCGGCTAACAAGGCCGCGGCTGTGTTCGACCTGCGCCGGGAGCCCAAGATCCCGGAGCCATTCCTGTGGCCGCACGAAGAGGCGCGGCCGACCTCGGCCGCGGAGCTGGAGGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGGCGCGGGGCTCCGCCGCGCCGCGGCGCAAGTGGCGGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACGGCGTGGACGCGGCGCTGGGGCGCGCCGCGCTGGACGGCGCCAGCGACTTCTTCCGGCTGCCGCTGGCTGAGAAGCAGCGGGCCCGGCGCGTCCCCGGCACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGAGACCCTGTCCTTCGGCTTCCACGACGGCGCCGCGGCGCCCGTCGTCGTGGACTACTTCACCGGCACCCTCGGCCAAGATTTCGAGCCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGCGCGGCTACTACCGGGAGTTCTTCGAGGACAGCCGCTCCATCATGCGGACGACGTCGGCGGGCTGGAGGTCCTGGTGGACGGCGAGTGGCGCCCCGTCCGGCCCGTCCCAGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGCGCGGTGGTGA - >Zm00001eb145600_T002
ATGGACGCCAGCCCGACCCCACCGCTCCCCCTCCGCGCCCCAACTCCCAGCATTGACCTCCCCGCTGGCAAGGACAGGGCCGACGCGGCGGCTAACAAGGCCGCGGCTGTGTTCGACCTGCGCCGGGAGCCCAAGATCCCGGAGCCATTCCTGTGGCCGCACGAAGAGGCGCGGCCGACCTCGGCCGCGGAGCTGGAGGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGGCGCGGGGCTCCGCCGCGCCGCGGCGCAAGTGGCGGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACGGCGTGGACGCGGCGCTGGGGCGCGCCGCGCTGGACGGCGCCAGCGACTTCTTCCGGCTGCCGCTGGCTGAGAAGCAGCGGGCCCGGCGCGTCCCCGGCACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGAGACCCTGTCCTTCGGCTTCCACGACGGCGCCGCGGCGCCCGTCGTCGTGGACTACTTCACCGGCACCCTCGGCCAAGATTTCGAGCCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGCGCGGCTACTACCGGGAGTTCTTCGAGGACAGCCGCTCCATCATGCGGACGACGTCGGCGGGCTGGAGGTCCTGGTGGACGGCGAGTGGCGCCCCGTCCGGCCCGTCCCAGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGCGCGGTGGTGA
Protein Sequence
- >Zm00001eb145600_P001
MDASPTPPLPLRAPTPSIDLPAGKDRADAAANKAAAVFDLRREPKIPEPFLWPHEEARPTSAAELEVPVVDVGVLRNGDGAGLRRAAAQVAAACATHGFFQVCGHGVDAALGRAALDGASDFFRLPLAEKQRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDGAAAPVVVDYFTGTLGQDFEPVGRVYQRYCEEMKELSLTIMELLELSLGVERGYYREFFEDSRSIMRTTSAGWRSWWTASGAPSGPSQAPWSSTSATPSWRCPTGGTRAACTARW - >Zm00001eb145600_P002
MDASPTPPLPLRAPTPSIDLPAGKDRADAAANKAAAVFDLRREPKIPEPFLWPHEEARPTSAAELEVPVVDVGVLRNGDGAGLRRAAAQVAAACATHGFFQVCGHGVDAALGRAALDGASDFFRLPLAEKQRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDGAAAPVVVDYFTGTLGQDFEPVGRVYQRYCEEMKELSLTIMELLELSLGVERGYYREFFEDSRSIMRTTSAGWRSWWTASGAPSGPSQAPWSSTSATPSWRCPTGGTRAACTARW