Information report for ZmEREB180;ZmERF4
Gene Details
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Functional Descriptions
- Here, a candidate gene association analysis of the ZmERFVII gene family showed that a waterlogging-responsive gene, ZmEREB180, was tightly associated with waterlogging tolerance.
- ZmEREB180 expression specifically responded to waterlogging and was up-regulated by ethylene; in addition, its gene product localized to the nucleus. Variations in the 5ʹ-untranslated region (5ʹ-UTR) and mRNA abundance of this gene under waterlogging conditions were significantly associated with survival rate (SR).
- Ectopic expression of ZmEREB180 in Arabidopsis increased the SR after submergence stress, and overexpression of ZmEREB180 in maize also enhanced the SR after long-term waterlogging stress, apparently through enhanced formation of adventitious roots (ARs) and regulation of antioxidant levels.
- Transcriptomic assays of the transgenic maize line under normal and waterlogged conditions further provided evidence that ZmEREB180 regulated AR development and reactive oxygen species homeostasis.
- Functional analysis showed that ZmEREB180 plays a positive role in maize waterlogging tolerance, seemingly by promoting the formation of adventitious roots and coordinating ROS homeostasis.
Functional Keywords
Literature and News
- A group VII ethylene response factor gene, ZmEREB180, coordinates waterlogging tolerance in maize seedlings. DOI: 10.1111/pbi.13140 ; PMID: 31033158
- Identifying key regulatory genes of maize root growth and development by RNA sequencing. DOI: 10.1016/j.ygeno.2020.09.030 ; PMID: 32961281
- Genomic insights into historical improvement of heterotic groups during modern hybrid maize breeding. DOI: 10.1038/s41477-022-01190-2 ; PMID: 35851624
Gene Resources
- NCBI ID: 100192457
- UniProt accessions: B4FQB2
- EMBL: BT039300 , CM007647 , EU970244 , KJ726938
- EnsemblPlants: Zm00001eb006180_T001
- Gramene: Zm00001eb006180_T001
- OMA: MFPYESM
- ExpressionAtlas: Zm00001eb006180
- InterPro: IPR001471 , IPR016177 , IPR036955 , IPR044808
- PANTHER: PTHR31190 , PTHR31190:SF194
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- OrthoDB: B4FQB2
- SMR: B4FQB2
- CDD: cd00018
Sequences
cDNA Sequence
- >Zm00001eb006180_T001
CTCCTCTCTCCGCCGGCAACCTTATTGGTATCAAGAAAAACTTGTCGAAAAATACACAGGGCACAATGTGCGGAGGCGCCATCCTCGCGGAGCTGATCCCGCCGACGCGGCGCGTGGCGTCGAAGCCGGTGACAGAAGGCCACCTCTGGTCGGCGAGCTCCAAGAAAGCCGGCAGCGGCAGGGACAAGAGGCACCAGCACGAATACGCCGACGATGACTTCGAGGCCGCCTTCGAGGACTTCGACGACGACTTTGACGTGCATGAAGACGACGAGGACGGCCACTTCGTATTCTCGTCCAAATCCGCCTTGTCCCCAGCCCTGCACGACGGGCGCGCGGCGAGCCAGAAGAAGCAGCGCGGGCGCCAGTTCCGCGGCATCCGGCAGCGGCCCTGGGGCAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACCCGCGTCTGGCTCGGCACCTTCAGCACCGCCGAGGACGCCGCCCGGGCCTACGACGTGGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCAGCCAGCGGTCGCGCTCGCGGTCGCGCGCGCCCACGCCGCGGCGACGACGGCAACCCACGAACCGCGCCGGAAACGCAGCACCCAGCACAGCCCGCTCTGCTGCCTCGAGGAGAGAGAGAGACGCAGAGGAAGGAAGGGATCGCCGCCGTGAAGCCAGAAGCTACGGAGTCGTTCGACGTGGGCGGCGGTCTCTTCTTCGACATGGCCTTCCCCACCTTCCCAGCCTCGCCGCCGCCGCAGGCCGTGGATACGTCCTTCGCCGGCAGCACCGCCACGTCGGAGACCGGGAGCCCCGCGAAGAGGCCGAGATGCGACGAAGACTCGTCCGAGGGCGGCAGCGGCTCCGCGCTGGAGCTCGCTGACGAGCTGGCGTTCGACCCGTTTGTGCTGCTGCAGATGCCCTACTCGGGTGGGTACGACGACGACTCACTGGACGGCCTTTTCGCCGCAGATGAGGCCGTGCAGCAGGACGTGGGCAACGGCATGGACGGCGTCCGCCTGTGGAGCTTCGACGAGTTCCCCGCCGTCGACGGTTCTGTTTTCTGACGTTTGCTTACTACGTACTACTACTATTTTCTGCCTGGTGGAATCATATGTGATAGTGCTGCATGTGTCTGCCTGATCGTCAGATTGTACTCCACTCTGGATATTTGTGCTACGTACTCGTCTGGTATTTCCTACTGTGGGTCAATGGTTCCTATGAATTTGTTCACGTCGGCGAAACTCTGTATTGTACGGTCGTGATTGATGTGCCAAATTAAATAAGCCTGTGAACCTGGTTCTATGTATATATGGTATCTTGATTATGAGTCACCGGCCTCCTAACC
CDS Sequence
- >Zm00001eb006180_T001
ATGTGCGGAGGCGCCATCCTCGCGGAGCTGATCCCGCCGACGCGGCGCGTGGCGTCGAAGCCGGTGACAGAAGGCCACCTCTGGTCGGCGAGCTCCAAGAAAGCCGGCAGCGGCAGGGACAAGAGGCACCAGCACGAATACGCCGACGATGACTTCGAGGCCGCCTTCGAGGACTTCGACGACGACTTTGACGTGCATGAAGACGACGAGGACGGCCACTTCGTATTCTCGTCCAAATCCGCCTTGTCCCCAGCCCTGCACGACGGGCGCGCGGCGAGCCAGAAGAAGCAGCGCGGGCGCCAGTTCCGCGGCATCCGGCAGCGGCCCTGGGGCAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACCCGCGTCTGGCTCGGCACCTTCAGCACCGCCGAGGACGCCGCCCGGGCCTACGACGTGGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCAGCCAGCGGTCGCGCTCGCGGTCGCGCGCGCCCACGCCGCGGCGACGACGGCAACCCACGAACCGCGCCGGAAACGCAGCACCCAGCACAGCCCGCTCTGCTGCCTCGAGGAGAGAGAGAGACGCAGAGGAAGGAAGGGATCGCCGCCGTGAAGCCAGAAGCTACGGAGTCGTTCGACGTGGGCGGCGGTCTCTTCTTCGACATGGCCTTCCCCACCTTCCCAGCCTCGCCGCCGCCGCAGGCCGTGGATACGTCCTTCGCCGGCAGCACCGCCACGTCGGAGACCGGGAGCCCCGCGAAGAGGCCGAGATGCGACGAAGACTCGTCCGAGGGCGGCAGCGGCTCCGCGCTGGAGCTCGCTGACGAGCTGGCGTTCGACCCGTTTGTGCTGCTGCAGATGCCCTACTCGGGTGGGTACGACGACGACTCACTGGACGGCCTTTTCGCCGCAGATGAGGCCGTGCAGCAGGACGTGGGCAACGGCATGGACGGCGTCCGCCTGTGGAGCTTCGACGAGTTCCCCGCCGTCGACGGTTCTGTTTTCTGA
Protein Sequence
- >Zm00001eb006180_P001
MCGGAILAELIPPTRRVASKPVTEGHLWSASSKKAGSGRDKRHQHEYADDDFEAAFEDFDDDFDVHEDDEDGHFVFSSKSALSPALHDGRAASQKKQRGRQFRGIRQRPWGKWAAEIRDPHKGTRVWLGTFSTAEDAARAYDVEARRLRGSKAKVNFPAASGRARGRARPRRGDDGNPRTAPETQHPAQPALLPRGERETQRKEGIAAVKPEATESFDVGGGLFFDMAFPTFPASPPPQAVDTSFAGSTATSETGSPAKRPRCDEDSSEGGSGSALELADELAFDPFVLLQMPYSGGYDDDSLDGLFAADEAVQQDVGNGMDGVRLWSFDEFPAVDGSVF