Information report for ZmD1;ZmCYP90D1
Gene Details
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Functional Descriptions
- ZmD1, in the regulation of stalk length and thickness.
- The seed length, width, and hundred-grain weight were slightly reduced in ZmD1 mutants.
- The ZmD1 gene regulated stalk development by influencing cell length and width.
- The expression trends of ZmD1 and ZmBZR1 were complementary in maize stalks.
- Cytochrome P450 D1 (ZmD1) and Brassinzole-resistant 1 (ZmBZR1), were identified as hub genes in the elongated stalk network.
- ZmCYP90D1 regulates maize internode development by modulating brassinosteroid-mediated cell division and growth.
- A candidate gene, ZmCYP90D1, which encodes a member of the cytochrome P450 family, was isolated by map-based cloning. ZmCYP90D1 was constitutively expressed and showed highest expression in basal internodes, and its protein was targeted to the nucleus.
Functional Keywords
Literature and News
- A spatiotemporal transcriptomic network dynamically modulates stalk development in maize. DOI: 10.1111/pbi.13909 ; PMID: 36070002
- ZmCYP90D1 regulates maize internode development by modulating brassinosteroid-mediated cell division and growth DOI: 10.1016/j.cj.2023.11.002 ; PMID:
- The brassinosteroid biosynthesis gene, ZmD11, increases seed size and quality in rice and maize. DOI: 10.1016/j.plaphy.2021.01.031 ; PMID: 33540331
Gene Resources
- NCBI ID: 100384722
- UniProt accessions: C4IZQ0 , A0A1D6MHH1
- EMBL: CM007649
- AlphaFoldDB: A0A1D6MHH1
- InterPro: IPR001128 , IPR002401 , IPR017972 , IPR036396
- PANTHER: PTHR24286 , PTHR24286:SF30
- SUPFAM: SSF48264
- PROSITE: PS00086
- Gene3D: 1.10.630.10
- SMR: A0A1D6MHH1
- CDD: cd11043
Homologs
- Arabidopsis thaliana: AT3G50660
- Brassica napus: BnaC06G0397500ZS, BnaA07G0337900ZS
- Brassica oleracea: Bo6g116740
- Brassica rapa: Bra015998
- Daucus carota: DCAR_023236
- Glycine max: Glyma.16G210300, Glyma.09G160900
- Nicotiana attenuata: A4A49_27743
- Oryza sativa: D2;CYP90D2, OsCYP1, OsCPD2, OsCPD1, OsDWARF;OsBRD1
- Prunus avium: Pav_sc0000103.1_g1970.1.mk
- Prunus persica: PRUPE_5G245500
- Rosa chinensis: RchiOBHm_Chr7g0176891
- Triticum aestivum: TaDWF4-3B
Sequences
cDNA Sequence
- >Zm00001eb120890_T001
GCTGTGCCTGTCGTCTCTCCCTCTCTCCTCGCCTGTAGTATGTAGTGTACTTTCTGCACTTGCCGATTCGATTCCATGCTTCCATTGACGCCACGACCACGCTACATATAAGTGGCGTCTGCGGTGCCTCTCCTCCGACCCTCGTCCTCGTCCTCGCGCAGCCTCTGCTTCCATATAACTCGCTCACTGCTCGCGCGCCTCGGTGGGTGCAAACGCGCACAGGGACAGAAACAGAGACAGAGCCAGCCATGTCGACCACCACCCTGCAGCTGGTTCCGTGGCCGCCGGAGCCGGCGCGCGCCGCCGTGCTGCTTGTTGCGGCGGTCGTCTGCCTGTGGGTGCTTCTGTCACGCAGGCGGGCCGCCGGAGGGAGCAAGGACAAGGAGCGGGCGGCCCGGCTCCCGCCCGGCAGCTTCGGGTGGCCGCTGGTGGGCGAGACGCTGGACTTCGTGTCCTGCGCCTACTCCTCCCGCCCGGAGGCCTTCGTCGACAAGCGCCGCCTGCTGCACGGGAGCGCGGTGTTCCGGTCGCACCTGTTCGGCTCGGCGACGGTGGTGACGTCGGACGCGGAGGTGAGCCGGTTCGTGCTGCACAGCGACGCGCGCGCCTTCGTGCCCTGGTACCCGCGGTCGCTGACGGAGCTCATGGGCGAGTCCTCCATCCTGCTCATCAACGGCAGCCTGCAGCGGCGCGTGCACGGCCTCGTCGGCGCCTTCTTCAAGTCGCCGCAGCTCAAGGCGCAGGTCACCGCCGACATGCAGCGCCGCCTCGCGCCCGCGCTCGCCGCCTGGAAGGTTCGGTGCGCCTCCGCGCCGCCGCTCCGCATCCAGGACCACGCCAAGACGATCGTGTTCGAGATCCTGGTGAGGGGTCTGATCGGGCTGGAGGCAGGCCCGGAGATGCAGCAGCTCAAGCACCAGTTCCAGGAATTCATTGTCGGCCTCATGTCCCTCCCCATCAAGCTGCCGGGGACTAGGCTCTACAGGTCCCTCCAGGCCAAGAAGAGGATGGCCACGCTGATACAGGGGATCATACAGGAGAAGAGGCGGCGGCGGAGGGCCGCCCTTGAGGATGGCGGAGAGGGCGAGGGCGAGGCCGGTCCCCCGCGCGACGTCATCGACGTGCTCATAAGCGGCGGCGACGAGCTCACCGACGAGCTCATATCCGACAACATGATCGACCTGATGATCCCCGCCGAGGACTCTGTGCCCGTGCTCATCACGCTCGCCGTCAAGTATCTCAGCGAGTGCCCGCTTGCTCTGCAACAACTTGAGGAGGAGAACATGCAGCTGAAGAGGCGGAAAACCGACGTGGGAGAGACCTTGCAGTGGACGGACTACATGTCACTGTCGTTCACACAACATGTGATAACGGAGACACTGCGGATGGGGAATATCATCAACGGGATCATGCGCAAAGCGGTGCGGGACGTGGAGGTGAAGGGGCACCTCATCCCCAAGGGCTGGTGCGTGTTCGTGTACTTCCGGTCGGTCCACCTCGACGACAAGCGCTACGACGAGCCCTACAGGTTCAACCCGTGGAGGTGGAAGGAGAAGGACACGAGCACCATGGGCTTCACCCCTTTTGGCGGTGGGCAGAGGCTGTGCCCAGGCCTGGATCTGGCCAGGCTGGAAGCTTCCATCTTTCTCCATCACCTGGTGACCAGCTTCAGGTGGGTGGCGGAGGAGGACCACATCGTCAACTTCCCAACCGTGCGGCTCAAGCGAGGCATGCCCGTCAGGCTCACCAGCAAAGACTAGCTAGCTAGTCACTACGACCTGCTTGTGCATGCCATGCATGCAGATTTCAGTCACGTCATATGCAATATATATTGGACCCTGGAGGTTGCACGTGTACAGAAGAGAGGATGCAGGAGCTAGCAGATGATCGGAGGTATTTAGGCAGACTGAAATTGAATCGACCGCGAAGAGTAGCACACTACTATACCACGAGTATGATCTGTAGTAGTAGTAATAAGAGGAATATAATATCATTAGTGTGGTAGTATTTACTTATTATACTACTCTCTCTTTTCGTTTTTATTTATCGTGTTTTAGTTTAAAAATGAACTAGCGAGGTTAGTCAATAGGCGTGCATGCATGGCCCATCATGGTCATGGATATATAGGCCTTGATGGTTATACTAGTATAAGCAGTAGTGTTATGTCACAAGGGATTACTGGGATCTGGGATGATGATCCACAATCCCATCTAAAACGAAAAGAGTTAATAAAGATTGTTAAGTTTACTG
CDS Sequence
- >Zm00001eb120890_T001
ATGTCGACCACCACCCTGCAGCTGGTTCCGTGGCCGCCGGAGCCGGCGCGCGCCGCCGTGCTGCTTGTTGCGGCGGTCGTCTGCCTGTGGGTGCTTCTGTCACGCAGGCGGGCCGCCGGAGGGAGCAAGGACAAGGAGCGGGCGGCCCGGCTCCCGCCCGGCAGCTTCGGGTGGCCGCTGGTGGGCGAGACGCTGGACTTCGTGTCCTGCGCCTACTCCTCCCGCCCGGAGGCCTTCGTCGACAAGCGCCGCCTGCTGCACGGGAGCGCGGTGTTCCGGTCGCACCTGTTCGGCTCGGCGACGGTGGTGACGTCGGACGCGGAGGTGAGCCGGTTCGTGCTGCACAGCGACGCGCGCGCCTTCGTGCCCTGGTACCCGCGGTCGCTGACGGAGCTCATGGGCGAGTCCTCCATCCTGCTCATCAACGGCAGCCTGCAGCGGCGCGTGCACGGCCTCGTCGGCGCCTTCTTCAAGTCGCCGCAGCTCAAGGCGCAGGTCACCGCCGACATGCAGCGCCGCCTCGCGCCCGCGCTCGCCGCCTGGAAGGTTCGGTGCGCCTCCGCGCCGCCGCTCCGCATCCAGGACCACGCCAAGACGATCGTGTTCGAGATCCTGGTGAGGGGTCTGATCGGGCTGGAGGCAGGCCCGGAGATGCAGCAGCTCAAGCACCAGTTCCAGGAATTCATTGTCGGCCTCATGTCCCTCCCCATCAAGCTGCCGGGGACTAGGCTCTACAGGTCCCTCCAGGCCAAGAAGAGGATGGCCACGCTGATACAGGGGATCATACAGGAGAAGAGGCGGCGGCGGAGGGCCGCCCTTGAGGATGGCGGAGAGGGCGAGGGCGAGGCCGGTCCCCCGCGCGACGTCATCGACGTGCTCATAAGCGGCGGCGACGAGCTCACCGACGAGCTCATATCCGACAACATGATCGACCTGATGATCCCCGCCGAGGACTCTGTGCCCGTGCTCATCACGCTCGCCGTCAAGTATCTCAGCGAGTGCCCGCTTGCTCTGCAACAACTTGAGGAGGAGAACATGCAGCTGAAGAGGCGGAAAACCGACGTGGGAGAGACCTTGCAGTGGACGGACTACATGTCACTGTCGTTCACACAACATGTGATAACGGAGACACTGCGGATGGGGAATATCATCAACGGGATCATGCGCAAAGCGGTGCGGGACGTGGAGGTGAAGGGGCACCTCATCCCCAAGGGCTGGTGCGTGTTCGTGTACTTCCGGTCGGTCCACCTCGACGACAAGCGCTACGACGAGCCCTACAGGTTCAACCCGTGGAGGTGGAAGGAGAAGGACACGAGCACCATGGGCTTCACCCCTTTTGGCGGTGGGCAGAGGCTGTGCCCAGGCCTGGATCTGGCCAGGCTGGAAGCTTCCATCTTTCTCCATCACCTGGTGACCAGCTTCAGGTGGGTGGCGGAGGAGGACCACATCGTCAACTTCCCAACCGTGCGGCTCAAGCGAGGCATGCCCGTCAGGCTCACCAGCAAAGACTAG
Protein Sequence
- >Zm00001eb120890_P001
MSTTTLQLVPWPPEPARAAVLLVAAVVCLWVLLSRRRAAGGSKDKERAARLPPGSFGWPLVGETLDFVSCAYSSRPEAFVDKRRLLHGSAVFRSHLFGSATVVTSDAEVSRFVLHSDARAFVPWYPRSLTELMGESSILLINGSLQRRVHGLVGAFFKSPQLKAQVTADMQRRLAPALAAWKVRCASAPPLRIQDHAKTIVFEILVRGLIGLEAGPEMQQLKHQFQEFIVGLMSLPIKLPGTRLYRSLQAKKRMATLIQGIIQEKRRRRRAALEDGGEGEGEAGPPRDVIDVLISGGDELTDELISDNMIDLMIPAEDSVPVLITLAVKYLSECPLALQQLEEENMQLKRRKTDVGETLQWTDYMSLSFTQHVITETLRMGNIINGIMRKAVRDVEVKGHLIPKGWCVFVYFRSVHLDDKRYDEPYRFNPWRWKEKDTSTMGFTPFGGGQRLCPGLDLARLEASIFLHHLVTSFRWVAEEDHIVNFPTVRLKRGMPVRLTSKD