Information report for ZmCOP1;ZmCOP1a
Gene Details
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Functional Descriptions
- We found that the mesocotyl lengths of ZmCOP1 loss-of-function mutants were shorter than those of wild-type B73 in darkness, while the mesocotyl lengths of lines with ZmCOP1 overexpression were longer than those of wild-type B104.
- ZmCOP1 functions in the elongation of etiolated seedlings in darkness and affects plant height in light. Our data can be applied in the improvement of maize plant architecture.
- ZmCOP1 regulates a wide range of KEGG pathways, such as those for MAPK hormone signal transduction, ribosome formation, RNA transport, glyoxylic acid and dicarboxylic acid metabolism and biosynthesis of secondary metabolites.
- The plant height of mutants(upl13) was shorter in both short- and long-day photoperiods.
- ZmCOP1 involved in regulating photomorphogenesis.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100286122
- UniProt accessions: A0A1D6HLL0
- EMBL: CM000781
- EnsemblPlants: Zm00001eb256270_T001
- Gramene: Zm00001eb256270_T001
- OMA: GDYICCG
- ExpressionAtlas: Zm00001eb256270
- InterPro: IPR001680 , IPR001841 , IPR013083 , IPR015943 , IPR017907 , IPR019775 , IPR036322 , IPR042755
- PANTHER: PTHR44080 , PTHR44080:SF1
- SUPFAM: SSF50978 , SSF57850
- PROSITE: PS00518 , PS00678 , PS50082 , PS50089 , PS50294
- Gene3D: 2.130.10.10 , 3.30.40.10
- SMR: A0A1D6HLL0
- CDD: cd00200 , cd16504
Sequences
cDNA Sequence
- >Zm00001eb256270_T001
TGAGCCTTATTTGCACAGAGATTTCACAGGCTCTCCCATCGTCGGTTGGTGCGCGCGGCGCGTCTGGCGTGCAGCGGCGGCACGACACGCAACTAGCGCGAGGAGGGCGCGGCAGCAGCCGCTCCAGTCGACTTCTCCGACGTGGTCTCCTCCCACCCATACACCCATCCCTTCCCCTCCCACACAGGCACACACACACCCACAGCACCCAATTCCCTCGCGCTCCCCCTCTCCCGCATCACACATCCCACCGCCGCCGCCACCACCACCACCCGCCCTATACCCGTATATAATTACTCGTACCCGGACGCCACCGCCGCCTGCGCCATGGGCGACTCCTCGGTGGCCGGCGCGCTCGTGCCGTCCGTGCCCAAGCCGGAGCCCGCGCCGTCCGGTGACACCTCCGCGGCGGCCGCGGCGACTACAGCGGCGCTGGCGATGCCGGAGGAGGCGGGTATGCGCGCGGCGTCGGCGTCGCCTCAGGGGCCTGCGGAGGAGGGGGAGGGCCCCGCCGATAGGGACCTCCTCTGCCCGATCTGCATGGCCGTCATCAAGGACGCCTTCCTCACCGCATGCGGCCACAGCTTCTGCTACATGTGCATCGTCACGCACCTCAGCAACAAGAGCGACTGCCCCTGCTGCGGGCATTACCTTACCAAGGCCCAGCTCTACCCCAACTTTCTCCTTGACAAGGTTCTGAAGAAAATATCAGCCCAACAAATAGCAAAAACAGCATCGCCGATCGATCAATTTCGATGTGCATTGCAACAGGGAAATGAAATGGGGGTTAAAGAGTTGGATAGCCTTATGACTTTGATTGCTGAGAAGAAGCGGCAAATGGAACAACAAGAATCAGAGACAAATATGCAAATATTGCTAGTCTTCTTACACTGCCTTAGAAAGCAAAAGCTAGAAGAGTTGAATGAGATTCAAACTGATCTACAATACATCAAAGAGGATATAAGTTCTGTGGAGAGACATAGGGCAGAATTATATCGCACAAAAGAAAGGTACTCCATGAAGCTGCGCATGCTTTTAGATGAGCCTACTGCGCAAAAAATGTGGCCCTCTCCTATAGACAAAGCTAGCTGTCGCTTTCTTCCCAACTCTCGGACACCACTTAGTGGATCATGTCCAGGAACTTTACAGAATAAGAAGCTTGATTTGAAAGCTCAAGTAAGCCATCAAGGATTTCAAAGGAGAGATGCTCTAACTTCTTCTGATCCTCCTAACTCCCCTATACAATCGGGTAATGTTATTGCTAGGAAGAGGCGAGTTCAAGCACAGTTCAATGAGCTTCAAGAATACTACCTGCAAAGACGTCGTACTGGAGCACAGGCACGCAGACAAGAAGAAAGAGATATAGTTGCAATGAATAGAGAAGGCTATCATGCAGGTCTTCAGGATTTCCAGTCTGTGCTAACAACGTTCACTCGATACAGTCGTCTACGTGTCATTGCGGAACTAAGACATGGAGACTTGTTTCACTCTGCCAATATTGTATCCAGTATTGAATTTGATCGTGATGATGAACTATTTGCTACCGCTGGAGTCTCGAAACGTATTAAAGTCTTCGAATTTTCCACTGTTGTTAATGAACCATCAGATGTGCATTGCCCAGTTGTTGAAATGGCTACCAGATCTAAACTTAGCTGCCTAAGCTGGAACAAGTACTCAAAAAATATTATTGCAAGCAGTGACTATGAGGGTATAGTAACTGTGTGGGATGTTCAGACCCGTCAGAGTGTGATGGAATATGAAGAGCATGAGAAGAGAGCATGGAGTGTTGATTTTTCTCGCACAGACTCTTCAATGCTAGTATCTGGGAGTGATGATTGCAAGGTGAAAGTGTGGTGCACAAATCAAGAAGCAAGTGTGATCAATATTGATATGAAAGCAAATATTTGCTCGGTTAAATATAATCCTGGATCAAGCTTCTACGTTGCAGTCGGATCTGCTGATCACCATATTCATTACTTTGATTTACGTAATCCAAGTTCGCCTGTCCATATTTTTGGGGGGCACAAGAAAGCAGTATCATATGTGAAATTCTTATCTAACAATGAGCTTGCGTCTGCATCAACAGATAGCACATTACGCTTATGGGATGTCAAGGATAACTGCCCGGTACGGACATTCAGAGGACACAAAAATGAAAAGAACTTTGTTGGCTTGTCTGTGAACAATGAATATATTGCTTGTGGAAGTGAGACAAATGAGGTTTTTGTTTATCACAAGGCTATCTCGAAACCGGCAGCAAGCCATAGATTTGTATCTTCTGACCTGGATGATGCCGATGATGATCCTGGTTCTTATTTCATTAGTGCTGTCTGCTGGAAGAGTGATAGCCCTACGATGTTAACTGCTAACAGTCAGGGGACCATAAAAGTTCTTGTACTTGCTCCTTGATGTTATGGAGGGCGTTCAAGAGGTTCACAGTACTGTCCAGTTGTTTCCTTTCGTGTCATTATATTCCCCCAAAATTGGGAACGGGGGCATAATTGATCTCCGGTTAGGGAATGAAGTTTTGCAGATGGTCAGCTGACGTAGGGTTTTGAGGTATCAGAATGTGCATAGTCATGTTTATGTTGTATAGGTGTAATTGTGTAAAGCAGCCAAGTTATTGGTTACAAGTGTAACACGAGAAATACACATTAATAAAAAAAAAACCTCCAGCTCGTTTGTACAGAGATTGTGCTTGAACCCAGAACCTTATGTGGTAATTGCGATTGGTAATATATCTACCTGATATGATCAAACGGATGCCGTAATCAGCAATTGTTTCTTTC
CDS Sequence
- >Zm00001eb256270_T001
ATGGGCGACTCCTCGGTGGCCGGCGCGCTCGTGCCGTCCGTGCCCAAGCCGGAGCCCGCGCCGTCCGGTGACACCTCCGCGGCGGCCGCGGCGACTACAGCGGCGCTGGCGATGCCGGAGGAGGCGGGTATGCGCGCGGCGTCGGCGTCGCCTCAGGGGCCTGCGGAGGAGGGGGAGGGCCCCGCCGATAGGGACCTCCTCTGCCCGATCTGCATGGCCGTCATCAAGGACGCCTTCCTCACCGCATGCGGCCACAGCTTCTGCTACATGTGCATCGTCACGCACCTCAGCAACAAGAGCGACTGCCCCTGCTGCGGGCATTACCTTACCAAGGCCCAGCTCTACCCCAACTTTCTCCTTGACAAGGTTCTGAAGAAAATATCAGCCCAACAAATAGCAAAAACAGCATCGCCGATCGATCAATTTCGATGTGCATTGCAACAGGGAAATGAAATGGGGGTTAAAGAGTTGGATAGCCTTATGACTTTGATTGCTGAGAAGAAGCGGCAAATGGAACAACAAGAATCAGAGACAAATATGCAAATATTGCTAGTCTTCTTACACTGCCTTAGAAAGCAAAAGCTAGAAGAGTTGAATGAGATTCAAACTGATCTACAATACATCAAAGAGGATATAAGTTCTGTGGAGAGACATAGGGCAGAATTATATCGCACAAAAGAAAGGTACTCCATGAAGCTGCGCATGCTTTTAGATGAGCCTACTGCGCAAAAAATGTGGCCCTCTCCTATAGACAAAGCTAGCTGTCGCTTTCTTCCCAACTCTCGGACACCACTTAGTGGATCATGTCCAGGAACTTTACAGAATAAGAAGCTTGATTTGAAAGCTCAAGTAAGCCATCAAGGATTTCAAAGGAGAGATGCTCTAACTTCTTCTGATCCTCCTAACTCCCCTATACAATCGGGTAATGTTATTGCTAGGAAGAGGCGAGTTCAAGCACAGTTCAATGAGCTTCAAGAATACTACCTGCAAAGACGTCGTACTGGAGCACAGGCACGCAGACAAGAAGAAAGAGATATAGTTGCAATGAATAGAGAAGGCTATCATGCAGGTCTTCAGGATTTCCAGTCTGTGCTAACAACGTTCACTCGATACAGTCGTCTACGTGTCATTGCGGAACTAAGACATGGAGACTTGTTTCACTCTGCCAATATTGTATCCAGTATTGAATTTGATCGTGATGATGAACTATTTGCTACCGCTGGAGTCTCGAAACGTATTAAAGTCTTCGAATTTTCCACTGTTGTTAATGAACCATCAGATGTGCATTGCCCAGTTGTTGAAATGGCTACCAGATCTAAACTTAGCTGCCTAAGCTGGAACAAGTACTCAAAAAATATTATTGCAAGCAGTGACTATGAGGGTATAGTAACTGTGTGGGATGTTCAGACCCGTCAGAGTGTGATGGAATATGAAGAGCATGAGAAGAGAGCATGGAGTGTTGATTTTTCTCGCACAGACTCTTCAATGCTAGTATCTGGGAGTGATGATTGCAAGGTGAAAGTGTGGTGCACAAATCAAGAAGCAAGTGTGATCAATATTGATATGAAAGCAAATATTTGCTCGGTTAAATATAATCCTGGATCAAGCTTCTACGTTGCAGTCGGATCTGCTGATCACCATATTCATTACTTTGATTTACGTAATCCAAGTTCGCCTGTCCATATTTTTGGGGGGCACAAGAAAGCAGTATCATATGTGAAATTCTTATCTAACAATGAGCTTGCGTCTGCATCAACAGATAGCACATTACGCTTATGGGATGTCAAGGATAACTGCCCGGTACGGACATTCAGAGGACACAAAAATGAAAAGAACTTTGTTGGCTTGTCTGTGAACAATGAATATATTGCTTGTGGAAGTGAGACAAATGAGGTTTTTGTTTATCACAAGGCTATCTCGAAACCGGCAGCAAGCCATAGATTTGTATCTTCTGACCTGGATGATGCCGATGATGATCCTGGTTCTTATTTCATTAGTGCTGTCTGCTGGAAGAGTGATAGCCCTACGATGTTAACTGCTAACAGTCAGGGGACCATAAAAGTTCTTGTACTTGCTCCTTGA
Protein Sequence
- >Zm00001eb256270_P001
MGDSSVAGALVPSVPKPEPAPSGDTSAAAAATTAALAMPEEAGMRAASASPQGPAEEGEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKISAQQIAKTASPIDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISSVERHRAELYRTKERYSMKLRMLLDEPTAQKMWPSPIDKASCRFLPNSRTPLSGSCPGTLQNKKLDLKAQVSHQGFQRRDALTSSDPPNSPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGAQARRQEERDIVAMNREGYHAGLQDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTDSSMLVSGSDDCKVKVWCTNQEASVINIDMKANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSSPVHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNCPVRTFRGHKNEKNFVGLSVNNEYIACGSETNEVFVYHKAISKPAASHRFVSSDLDDADDDPGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAP