Gene Details:
- Gene ID: Zm00001d002431
- Gene Symbol: ZmCOLD1-2 cold2
- Gene Name: cold rsponsive2
- Genome: Zm-B73-REFERENCE-GRAMENE-4.0
- Species: Zea mays
Functional Descriptions:
- Two GTG genes localized on chromosome 10 (Chr 10) and chromosome 2 (Chr 2), named as ZmCOLD1-2 and ZmCOLD1-10, were identified and annotated as putative GPCR-type G protein COLD1 based on bioinformatics analysis.
- ZmCOLD1-2 was only expressed in primary root, stem and shoot apical meristem, and innermost husk.
- ZmCOLD1-2 only expressed in primary root, stem and shoot apical meristem, and inner most husk.
Function-related keywords:
- stem , root , shoot , meristem , root-apical-meristem , shoot-apical-meristem , primary-root , root-meristem , shoot-meristem
Literature:
- Characterization of ZmCOLD1, novel GPCR-Type G Protein genes involved in cold stress from Zea mays L. and the evolution analysis with those from other species. DOI: 10.1007/s12298-021-00966-8 ; PMID: 33854288
Related News:
Gene Resources:
- NCBI ID: 103645985
- UniProt accessions: A0A1D6E0P8
Sequences:
cDNA Sequence
- >Zm00001eb233790_T001
GCTTCGCAAGCTTTCCTGCTAATCCCTGCCATTAGTAGCAAGCAAGCAAGAAAGCAGTGGTAGTAGGTGCCACCCACACGGTTTTCACGGCTGCCGGCTGGGAGCGACCGAGGAGATCGTCGTCACGCTCGATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGATGACGCGTGCCGTGTGAGTGTTGCCGCGCGCGTCGCGTGCCCCATGTTTTCACGGATTGGGCCGGCGCGCGTGCGAGCCATGCTGCATGCGCGCCTACGTGTTTGCTGGAGCGGCGAGCTCCTAGTTGGCGATCACATGCCGTTTTGGGCTAGCCATGGTTAAATTAGCAGGCTAGCGTGTACTGCTGCTGCGTTTGTTTGCTGGGGCGACCAGTTCTACTAATAGTACGTAGTACCGTGTAATTTTGGGTCAGGAAGAGATGCTTAGCATCTGTTTCGATTGATCGATGTAGTATTATGCTATAATTGGAAAGGCCTCTCGATCTATTTGC
CDS Sequence
- >Zm00001eb233790_T001
ATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGA
Protein Sequence
- >Zm00001eb233790_P001
MEALVGRYWGLGGRRCGACGGSPAAAHCRTCPGGAYLCGGCDAGHARAGHERVWVCEVCECAPAAVTCRADAAALCAACDADIHDANPLARRHERVPVQPIGAAADPAAEKAALLFGLAAEGKDGGDAAKVVVDASKLDLLFADDVVDPFLAQDFARFPHADSVVPNDGSNCGAAVDFDFGGGVAVAAKQPSYSSYTAASLGHSGSSSEVGLVPDVMCGRGGSVTGGVIELDFAQSKAAYLPYAATPTHSLSSLDVGAVPERSDGVMAGRLATPTPATATESREARLMRYREKRKNRRFEKTIRYASRKAYAESRPRIKGRFAKRADDNDADADLDEAAAPAPPARSQPQPQPQPSYRYVLDFAAGYGVVPTF
Source: Genetic information comes from the article