Gene Details:
- Gene ID: Zm00001eb246780
- Gene Symbol: ZmCOL3
- Gene Name: C2C2-CO-like-transcription factor 3
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The absence of one cytosine in the ZmCOL3 3’UTR and the presence of a 551 bp fragment in the promoter region are likely the causal polymorphisms contributing to the maize adaptation from tropical to temperate regions.
- ZmCOL3, a CCT gene represses flowering in maize by interfering with the circadian clock and activating expression of ZmCCT.
- A CCT gene named ZmCOL3 was shown to be a repressor of flowering.
- Overexpressing ZmCOL3 delayed flowering time by approximately 4 d, in either long-day or short-day conditions.
- ZmCOL3 acts as an inhibitor of flowering either by transactivating transcription of ZmCCT, one of the key genes regulating maize flowering, or by interfering with the circadian clock.
- ZmCOL3 functions as a repressor of flowering.
Function-related keywords:
Literature:
- ZmCOL3, a CCT gene represses flowering in maize by interfering with the circadian clock and activating expression of ZmCCT. DOI: 10.1111/jipb.12632 ; PMID: 29319223
Related News:
Gene Resources:
- NCBI ID: 100281289
- UniProt accessions: A0A1D6H2A1
Sequences:
cDNA Sequence
- >Zm00001eb233790_T001
GCTTCGCAAGCTTTCCTGCTAATCCCTGCCATTAGTAGCAAGCAAGCAAGAAAGCAGTGGTAGTAGGTGCCACCCACACGGTTTTCACGGCTGCCGGCTGGGAGCGACCGAGGAGATCGTCGTCACGCTCGATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGATGACGCGTGCCGTGTGAGTGTTGCCGCGCGCGTCGCGTGCCCCATGTTTTCACGGATTGGGCCGGCGCGCGTGCGAGCCATGCTGCATGCGCGCCTACGTGTTTGCTGGAGCGGCGAGCTCCTAGTTGGCGATCACATGCCGTTTTGGGCTAGCCATGGTTAAATTAGCAGGCTAGCGTGTACTGCTGCTGCGTTTGTTTGCTGGGGCGACCAGTTCTACTAATAGTACGTAGTACCGTGTAATTTTGGGTCAGGAAGAGATGCTTAGCATCTGTTTCGATTGATCGATGTAGTATTATGCTATAATTGGAAAGGCCTCTCGATCTATTTGC
CDS Sequence
- >Zm00001eb233790_T001
ATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGA
Protein Sequence
- >Zm00001eb233790_P001
MEALVGRYWGLGGRRCGACGGSPAAAHCRTCPGGAYLCGGCDAGHARAGHERVWVCEVCECAPAAVTCRADAAALCAACDADIHDANPLARRHERVPVQPIGAAADPAAEKAALLFGLAAEGKDGGDAAKVVVDASKLDLLFADDVVDPFLAQDFARFPHADSVVPNDGSNCGAAVDFDFGGGVAVAAKQPSYSSYTAASLGHSGSSSEVGLVPDVMCGRGGSVTGGVIELDFAQSKAAYLPYAATPTHSLSSLDVGAVPERSDGVMAGRLATPTPATATESREARLMRYREKRKNRRFEKTIRYASRKAYAESRPRIKGRFAKRADDNDADADLDEAAAPAPPARSQPQPQPQPSYRYVLDFAAGYGVVPTF
Source: Genetic information comes from the article