Information report for ZmCOL3
Gene Details
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Functional Descriptions
- The absence of one cytosine in the ZmCOL3 3’UTR and the presence of a 551 bp fragment in the promoter region are likely the causal polymorphisms contributing to the maize adaptation from tropical to temperate regions.
- ZmCOL3, a CCT gene represses flowering in maize by interfering with the circadian clock and activating expression of ZmCCT.
- A CCT gene named ZmCOL3 was shown to be a repressor of flowering.
- Overexpressing ZmCOL3 delayed flowering time by approximately 4 d, in either long-day or short-day conditions.
- ZmCOL3 acts as an inhibitor of flowering either by transactivating transcription of ZmCCT, one of the key genes regulating maize flowering, or by interfering with the circadian clock.
- ZmCOL3 functions as a repressor of flowering.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100281289
- UniProt accessions: A0A1D6H2A1
- EMBL: CM000781
- EnsemblPlants: Zm00001eb233790_T001
- Gramene: Zm00001eb233790_T001
- KEGG: zma:103626702
- OMA: FADFMDP
- ExpressionAtlas: Zm00001eb233790
- InterPro: IPR000315 , IPR010402 , IPR045281
- PANTHER: PTHR31319 , PTHR31319:SF61
- PROSITE: PS50119 , PS51017
- OrthoDB: A0A1D6H2A1
- SMR: A0A1D6H2A1
Sequences
cDNA Sequence
- >Zm00001eb233790_T001
GCTTCGCAAGCTTTCCTGCTAATCCCTGCCATTAGTAGCAAGCAAGCAAGAAAGCAGTGGTAGTAGGTGCCACCCACACGGTTTTCACGGCTGCCGGCTGGGAGCGACCGAGGAGATCGTCGTCACGCTCGATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGATGACGCGTGCCGTGTGAGTGTTGCCGCGCGCGTCGCGTGCCCCATGTTTTCACGGATTGGGCCGGCGCGCGTGCGAGCCATGCTGCATGCGCGCCTACGTGTTTGCTGGAGCGGCGAGCTCCTAGTTGGCGATCACATGCCGTTTTGGGCTAGCCATGGTTAAATTAGCAGGCTAGCGTGTACTGCTGCTGCGTTTGTTTGCTGGGGCGACCAGTTCTACTAATAGTACGTAGTACCGTGTAATTTTGGGTCAGGAAGAGATGCTTAGCATCTGTTTCGATTGATCGATGTAGTATTATGCTATAATTGGAAAGGCCTCTCGATCTATTTGC
CDS Sequence
- >Zm00001eb233790_T001
ATGGAGGCCCTGGTGGGGAGGTACTGGGGTCTGGGGGGACGGCGGTGCGGGGCGTGCGGCGGATCGCCGGCGGCGGCGCACTGCCGGACGTGCCCGGGCGGCGCGTACCTGTGCGGGGGGTGCGACGCGGGGCACGCGCGGGCGGGGCACGAGCGGGTGTGGGTCTGCGAGGTGTGCGAGTGCGCGCCGGCCGCCGTGACGTGCCGCGCCGACGCCGCCGCGCTCTGCGCCGCGTGCGACGCCGACATCCACGACGCCAACCCGCTGGCGCGCCGCCACGAGCGCGTCCCCGTGCAGCCCATCGGCGCCGCCGCTGATCCCGCCGCGGAGAAGGCGGCGCTGCTGTTCGGCCTTGCCGCGGAAGGGAAGGACGGCGGCGACGCGGCCAAGGTCGTCGTCGACGCCAGTAAGCTGGACCTCCTGTTCGCGGACGACGTGGTCGACCCGTTCCTCGCCCAAGACTTCGCCAGGTTCCCGCACGCCGACAGCGTCGTGCCGAACGATGGATCCAACTGCGGCGCCGCTGTGGACTTCGACTTTGGTGGCGGCGTCGCCGTCGCCGCCAAGCAGCCGTCCTACAGCTCCTACACGGCGGCGTCGCTGGGCCACAGCGGCTCGTCGTCGGAGGTCGGCCTGGTCCCAGACGTGATGTGCGGCCGCGGTGGGAGCGTGACCGGCGGCGTCATCGAGCTCGACTTCGCGCAGTCCAAGGCGGCGTACCTGCCTTACGCTGCAACTCCTACCCACAGCCTGTCGTCTTTGGACGTGGGCGCCGTGCCGGAGCGCAGTGACGGGGTCATGGCGGGCAGGCTCGCGACGCCGACGCCGGCGACGGCCACGGAGAGCAGGGAGGCGCGGCTGATGCGTTACCGCGAGAAACGGAAAAACCGGCGGTTCGAGAAGACGATCCGCTATGCGTCCCGGAAGGCCTACGCGGAGTCGCGGCCGCGCATCAAGGGCCGCTTCGCCAAGCGCGCGGATGACAACGACGCCGACGCCGACCTCGACGAGGCTGCCGCGCCGGCTCCGCCGGCGCGGTCGCAGCCGCAGCCGCAGCCGCAGCCATCGTACCGCTACGTGCTCGACTTCGCCGCCGGCTACGGCGTCGTGCCCACATTCTGA
Protein Sequence
- >Zm00001eb233790_P001
MEALVGRYWGLGGRRCGACGGSPAAAHCRTCPGGAYLCGGCDAGHARAGHERVWVCEVCECAPAAVTCRADAAALCAACDADIHDANPLARRHERVPVQPIGAAADPAAEKAALLFGLAAEGKDGGDAAKVVVDASKLDLLFADDVVDPFLAQDFARFPHADSVVPNDGSNCGAAVDFDFGGGVAVAAKQPSYSSYTAASLGHSGSSSEVGLVPDVMCGRGGSVTGGVIELDFAQSKAAYLPYAATPTHSLSSLDVGAVPERSDGVMAGRLATPTPATATESREARLMRYREKRKNRRFEKTIRYASRKAYAESRPRIKGRFAKRADDNDADADLDEAAAPAPPARSQPQPQPQPSYRYVLDFAAGYGVVPTF