Gene Details:
- Gene ID: Zm00001eb337910
- Gene Symbol: ZmCKX5 cko5 ckx5
- Gene Name: cytokinin oxidase 5
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Marker–trait association analysis in inbred lines identified 12 variants of ZmCKX5 that were significantly associated with six root traits, including seed root number (SRN), lateral root length (LRL), total root area (RA), root length in 0 to 0.5 mm diameter class (RL005), total root volume (RV), and total root length (TRL).
- These results indicate that ZmCKX5 may be involved in the development of the maize root system and that the significant variants can be used to develop functional markers to accelerate the improvement in the maize root system.
- ZmCKX5 may be involved in the development of the maize root system, and significant variants were identified that could be used to develop functional markers for improvement in the maize root system.
Function-related keywords:
- root , development , seed , root-development , lateral-root , seed-development , root-length , seed-length , root-number , lateral-root-number , lateral-root-length
Literature:
- Natural Variation and Domestication Selection of ZmCKX5 with Root Morphological Traits at the Seedling Stage in Maize. DOI: 10.3390/plants10010001 ; PMID: 33375032
Related News:
Gene Resources:
- NCBI ID: 100526749
- UniProt accessions: A0A804QLF0
Sequences:
cDNA Sequence
- >Zm00001eb337910_T001
AGCGCGTGGACGTGATGCTGCGTGAGCTGCGGTACGCGCGGGGGTTCGCGTACGTGCAGGACGTGTCGTACGAGCAGTTCCTGGACCGCGTGAGCGCCGGCGAGCGCAGGCTCCGCGGCGAGGGCCTCTGGGACGTGCCGCACCCGTGGCTCAACCTCTTCCTCCCGCGCTCCCGCATCCTCGACTTCGCCGCGGGCGTCTTCCACGGCGTGCTGCTCCCCACGCGCACGGCTGGCGGCGGCGGCGGCGGGCCCGTGCTGGTCTACCCCATGAACCGGGGCAAGTGGGACGGCGCGACGTCGGCGGTGCTCCCCTACGACGATGGCGACGGCGACGGCGACGAGGTGTTCTACACGGTGGGGATCCTGCGGTCGGCCGTGGCGGACGGCGACCTGCGCCGCATGGAGGAGCAGAACGCCGAGGTGGCGCGCTTCTGCGAGGCCGCCGGCATCCCCTGCACGCAGTACCTGCCCTCCTACGCCACGCAGGCGGACTGGGCGGCGCGCCACTTCGGCCCCGCCGGCAGCGGCAGGTGGGACACCTTCCTCCGCCGCAAGAGGAAATACGACCCCATGGCGATCTTGTCGCGCGGCCAGAGGATTTTCTCGTCCCCGCTACTTGCCTCATGATCCGCCGGTTCCGGTCTCTCGATCGTCGTGTGTTGCTGTTGCTGGCATGGGCTAGCTGCATGAAATAATAGTGCAAGCAAGCAAAGGCAAAGCAAGCTTCAAGGCATGACTGTTTTGCTTTAGCGTTTTACTGATCAGTAGTCAAGTGACACAGTTACTACGTACTACGATCTGTCTCTGACTCTCTTCCAGAGGGTCCCAAATATATGATGCTTTTTATTAACTTTATTTGACCGTTATTAAAAATATAGTGATATTGTTTACTTTAAACGAGTTATTTTATTGTTACAGAATTTTATCATTTACATAAAAATATAAATTTAAATAAATGATCAAATACAATAATAT
CDS Sequence
- >Zm00001eb337910_T001
ATGCTGCGTGAGCTGCGGTACGCGCGGGGGTTCGCGTACGTGCAGGACGTGTCGTACGAGCAGTTCCTGGACCGCGTGAGCGCCGGCGAGCGCAGGCTCCGCGGCGAGGGCCTCTGGGACGTGCCGCACCCGTGGCTCAACCTCTTCCTCCCGCGCTCCCGCATCCTCGACTTCGCCGCGGGCGTCTTCCACGGCGTGCTGCTCCCCACGCGCACGGCTGGCGGCGGCGGCGGCGGGCCCGTGCTGGTCTACCCCATGAACCGGGGCAAGTGGGACGGCGCGACGTCGGCGGTGCTCCCCTACGACGATGGCGACGGCGACGGCGACGAGGTGTTCTACACGGTGGGGATCCTGCGGTCGGCCGTGGCGGACGGCGACCTGCGCCGCATGGAGGAGCAGAACGCCGAGGTGGCGCGCTTCTGCGAGGCCGCCGGCATCCCCTGCACGCAGTACCTGCCCTCCTACGCCACGCAGGCGGACTGGGCGGCGCGCCACTTCGGCCCCGCCGGCAGCGGCAGGTGGGACACCTTCCTCCGCCGCAAGAGGAAATACGACCCCATGGCGATCTTGTCGCGCGGCCAGAGGATTTTCTCGTCCCCGCTACTTGCCTCATGA
Protein Sequence
- >Zm00001eb337910_P001
MLRELRYARGFAYVQDVSYEQFLDRVSAGERRLRGEGLWDVPHPWLNLFLPRSRILDFAAGVFHGVLLPTRTAGGGGGGPVLVYPMNRGKWDGATSAVLPYDDGDGDGDEVFYTVGILRSAVADGDLRRMEEQNAEVARFCEAAGIPCTQYLPSYATQADWAARHFGPAGSGRWDTFLRRKRKYDPMAILSRGQRIFSSPLLAS
Source: Genetic information comes from the article