Gene Details:

Functional Descriptions:

  • Mycorrhization led to a decrease in seed germination of the parasitic plant Striga hermonthica as examined in a bioassay. ZmCCD1 is proposed to be involved in cyclohexenone and mycorradicin formation in mycorrhizal maize roots but not in strigolactone formation.
  • Dominant Wc1 alleles enhance he white-grain phenotype of y1.
  • Dominant Wc1 kernel with white crown and pale yellow endosperm.
  • In maize, roots with mycorrhizal formations have shown a higher ZmCCD1 expression and induced lower germination of Striga.
  • Since the ZmCCD1 gene is involved in the formation of the yellow pigment apocarotenoids, it would be interesting in the future to understand the carotenoid levels of the lines and its relationship with Striga resistance in the maize inbred lines.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb402840_T002
    AGACGACGAGTGGAGTGGAGTAGGACACGAGGTGGTTCCGGCCGGCCCACTCGCAGAATCTTCTGCCACTGCCCTTCCATCTCGTCCCTTAGCTACAAGTCATCTCGCCGCAACCGGAACCCGCAGCCATGGGGACGGAGGCGGAGCAGCCGGACATGGACAGCCACCGAAACGACGGCGTCGTGGTGGTGCCAGCGCCGCGCCCGCGTAAGGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCCCTCGCCGTGCGCCTCGGCCACGACAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTCGCCCCCGTCGTCGAGGAGACCCCGCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCGGAGTGCTTGAATGGAGAGTTTGTCAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCGGGGTATCACTGGTTTGATGGAGACGGGATGATTCATGCCATGCGTATTAAGGATGGAAAAGCTACCTATGTATCAAGATATGTGAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAAATGCAGCAACTTCGGAAAAAATTCAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCTAATACTGCACTTATATATCATCATGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCATATGTTGTTAAGGTCCTTGAAGATGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGACAAAAGGTTGAAACATTCTTTTACTGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATGTTCACATTCGGATATTCACATGAACCTCCATACTGTACATACCGTGTGATTAACAAAGAAGGAGCTATGCTTGATCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGATTTTGCCATCACAGAGAATTACTCTATTTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAAATGGTGAAGAACGGTGAGTTTATCTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGTATTCTCCCCCGCTATGCAAAGGATGACAAACTCATCAGATGGTTTCAACTCCCTAATTGTTTCATATTCCATAATGCTAATGCTTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGCCGCCTTGAGAATCCAGATTTGGACAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAACTTCGGGAATGAGCTGTACGAGATGAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAGCAATTGTCTGTTTCTGCTGTGGATTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAGCAGCGGTATGTCTACTGCACTATACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAGTTTGATCTGCATGCTGAACCGGAAAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTACAAGGCATATATGACCTGGGACCTGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAGCATCCAGGTGTGTCCGGAGAAGAAGATGACGGCTATTTGATATTCTTTGTACACGACGAGAATACAGGGAAATCTGAAGTAAATGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTTGCGGTGGTTGAGCTTCCTAATAGGGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAGGACCAACTGGCTCGACAGGCGGAGGGGCAGTGAAGATACGGCACCTGCAGATTCTGCACACGCGGGTACATGTTGGAAGTTATTGCAGGACATGTATATGTATAGGACAAGTTTATTACACATGTATTCGAACCACACATTACACAAGTTTATTGCAGGACGTGTATTCGAACCACACATTACACATGTATATGTGTAGGACAAGTTTATTACAGTCCTGATTGATTGCAAATTACTCAGTCTGTTGCATGCTGTGTCTGTGGTGGCATGGCTAG
  • >Zm00001eb402840_T001
    AGACGACGAGTGGAGTGGAGTAGGACACGAGGTGGTTCCGGCCGGCCCACTCGCAGAATCTTCTGCCACTGCCCTTCCATCTCGTCCCTTAGCTACAAGTCATCTCGCCGCAACCGGAACCCGCAGCCATGGGGACGGAGGCGGAGCAGCCGGACATGGACAGCCACCGAAACGACGGCGTCGTGGTGGTGCCAGCGCCGCGCCCGCGTAAGGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCCCTCGCCGTGCGCCTCGGCCACGACAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTCGCCCCCGTCGTCGAGGAGACCCCGCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCGGAGTGCTTGAATGGAGAGTTTGTCAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCGGGGTATCACTGGTTTGATGGAGACGGGATGATTCATGCCATGCGTATTAAGGATGGAAAAGCTACCTATGTATCAAGATATGTGAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAAATGCAGCAACTTCGGAAAAAATTCAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCTAATACTGCACTTATATATCATCATGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCATATGTTGTTAAGGTCCTTGAAGATGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGACAAAAGGTTGAAACATTCTTTTACTGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATGTTCACATTCGGATATTCACATGAACCTCCATACTGTACATACCGTGTGATTAACAAAGAAGGAGCTATGCTTGATCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGATTTTGCCATCACAGAGAATTACTCTATTTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAAATGGTGAAGAACGGTGAGTTTATCTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGTATTCTCCCCCGCTATGCAAAGGATGACAAACTCATCAGATGGTTTCAACTCCCTAATTGTTTCATATTCCATAATGCTAATGCTTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGCCGCCTTGAGAATCCAGATTTGGACAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAACTTCGGGAATGAGCTGTACGAGATGAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAGCAATTGTCTGTTTCTGCTGTGGATTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAGCAGCGGTATGTCTACTGCACTATACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAGTTTGATCTGCATGCTGAACCGGAAAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTACAAGGCATATATGACCTGGGACCTGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAGCATCCAGGTGTGTCCGGAGAAGAAGATGACGGCTATTTGATATTCTTTGTACACGACGAGAATACAGGGAAATCTGAAGTAAATGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTTGCGGTGGTTGAGCTTCCTAATAGGGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAGGACCAACTGGCTCGACAGGCGGAGGGGCAGTGAAGATACGGCACCTGCAGATTCTGCACACGCGGGTACATGTTGGAAGTTATTGCAGGACATGTATATGTATAGGACAAGTTTATTACACATGTATTCGAACCACACATTACACAAGTTTATTGCAGGACGTGTATTCGAACCACACATTACACATGTATATGTGTAGGACAAGTTTATTACAGTCCTGATTGATTGCAAATTACTCAGTCTGTTGCATGCTGTGTCTGTGGTGGCATGGCTAG
CDS Sequence
  • >Zm00001eb402840_T002
    ATGGGGACGGAGGCGGAGCAGCCGGACATGGACAGCCACCGAAACGACGGCGTCGTGGTGGTGCCAGCGCCGCGCCCGCGTAAGGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCCCTCGCCGTGCGCCTCGGCCACGACAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTCGCCCCCGTCGTCGAGGAGACCCCGCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCGGAGTGCTTGAATGGAGAGTTTGTCAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCGGGGTATCACTGGTTTGATGGAGACGGGATGATTCATGCCATGCGTATTAAGGATGGAAAAGCTACCTATGTATCAAGATATGTGAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAAATGCAGCAACTTCGGAAAAAATTCAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCTAATACTGCACTTATATATCATCATGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCATATGTTGTTAAGGTCCTTGAAGATGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGACAAAAGGTTGAAACATTCTTTTACTGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATGTTCACATTCGGATATTCACATGAACCTCCATACTGTACATACCGTGTGATTAACAAAGAAGGAGCTATGCTTGATCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGATTTTGCCATCACAGAGAATTACTCTATTTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAAATGGTGAAGAACGGTGAGTTTATCTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGTATTCTCCCCCGCTATGCAAAGGATGACAAACTCATCAGATGGTTTCAACTCCCTAATTGTTTCATATTCCATAATGCTAATGCTTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGCCGCCTTGAGAATCCAGATTTGGACAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAACTTCGGGAATGAGCTGTACGAGATGAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAGCAATTGTCTGTTTCTGCTGTGGATTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAGCAGCGGTATGTCTACTGCACTATACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAGTTTGATCTGCATGCTGAACCGGAAAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTACAAGGCATATATGACCTGGGACCTGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAGCATCCAGGTGTGTCCGGAGAAGAAGATGACGGCTATTTGATATTCTTTGTACACGACGAGAATACAGGGAAATCTGAAGTAAATGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTTGCGGTGGTTGAGCTTCCTAATAGGGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAGGACCAACTGGCTCGACAGGCGGAGGGGCAGTGA
  • >Zm00001eb402840_T001
    ATGGGGACGGAGGCGGAGCAGCCGGACATGGACAGCCACCGAAACGACGGCGTCGTGGTGGTGCCAGCGCCGCGCCCGCGTAAGGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCCCTCGCCGTGCGCCTCGGCCACGACAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTCGCCCCCGTCGTCGAGGAGACCCCGCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCGGAGTGCTTGAATGGAGAGTTTGTCAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCGGGGTATCACTGGTTTGATGGAGACGGGATGATTCATGCCATGCGTATTAAGGATGGAAAAGCTACCTATGTATCAAGATATGTGAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAAATGCAGCAACTTCGGAAAAAATTCAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCTAATACTGCACTTATATATCATCATGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCATATGTTGTTAAGGTCCTTGAAGATGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGACAAAAGGTTGAAACATTCTTTTACTGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATGTTCACATTCGGATATTCACATGAACCTCCATACTGTACATACCGTGTGATTAACAAAGAAGGAGCTATGCTTGATCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGATTTTGCCATCACAGAGAATTACTCTATTTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAAATGGTGAAGAACGGTGAGTTTATCTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGTATTCTCCCCCGCTATGCAAAGGATGACAAACTCATCAGATGGTTTCAACTCCCTAATTGTTTCATATTCCATAATGCTAATGCTTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGCCGCCTTGAGAATCCAGATTTGGACAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAACTTCGGGAATGAGCTGTACGAGATGAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAGCAATTGTCTGTTTCTGCTGTGGATTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAGCAGCGGTATGTCTACTGCACTATACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAGTTTGATCTGCATGCTGAACCGGAAAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTACAAGGCATATATGACCTGGGACCTGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAGCATCCAGGTGTGTCCGGAGAAGAAGATGACGGCTATTTGATATTCTTTGTACACGACGAGAATACAGGGAAATCTGAAGTAAATGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTTGCGGTGGTTGAGCTTCCTAATAGGGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAGGACCAACTGGCTCGACAGGCGGAGGGGCAGTGA
Protein Sequence
  • >Zm00001eb402840_P002
    MGTEAEQPDMDSHRNDGVVVVPAPRPRKGLASWALDLLESLAVRLGHDKTKPLHWLSGNFAPVVEETPPAPNLSVRGHLPECLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTARLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQQLRKKFKVLDFTYGFGTANTALIYHHGKLMALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMFTFGYSHEPPYCTYRVINKEGAMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKGRFGILPRYAKDDKLIRWFQLPNCFIFHNANAWEEGDEVVLITCRLENPDLDKVNGYQSDKLENFGNELYEMRFNMKTGAASQKQLSVSAVDFPRVNESYTGRKQRYVYCTILDSIAKVTGIIKFDLHAEPESGVKELEVGGNVQGIYDLGPGRFGSEAIFVPKHPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEDQLARQAEGQ
  • >Zm00001eb402840_P001
    MGTEAEQPDMDSHRNDGVVVVPAPRPRKGLASWALDLLESLAVRLGHDKTKPLHWLSGNFAPVVEETPPAPNLSVRGHLPECLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTARLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQQLRKKFKVLDFTYGFGTANTALIYHHGKLMALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMFTFGYSHEPPYCTYRVINKEGAMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKGRFGILPRYAKDDKLIRWFQLPNCFIFHNANAWEEGDEVVLITCRLENPDLDKVNGYQSDKLENFGNELYEMRFNMKTGAASQKQLSVSAVDFPRVNESYTGRKQRYVYCTILDSIAKVTGIIKFDLHAEPESGVKELEVGGNVQGIYDLGPGRFGSEAIFVPKHPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEDQLARQAEGQ

Source: Genetic information comes from the article