Gene Details:

Functional Descriptions:

  • ZmAMP1 was associated not only with PH and internode length, but with other traits such as leaf size, preharvest sprouting, and anthocyanin accumulation.
  • The pleotropic effect of ZmAMP1 indicates that it is possible to select a favorable mutant allele for crop breeding.
  • qPH1_dla was fine-mapped to a 16 kb interval containing ZmAMP1, which was annotated as a glutamate carboxypeptidase. Allelism tests using two independent allelic mutants confirmed that ZmAMP1 was the causal gene.
  • Elucidating the biochemical function of ZmAMP1 and identifying the substrate of this glutamate carboxypeptidase may reveal its biological function.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb060200_T002
    AGCACCCAGGAAAGCATCCTGGCTCCTGTCCCTCCTCGCCATTTCACGAGCTCCCATTTCACACGCTCACTCCGTCACTCGCTCGCCTCCGCCGTCGCAAAGCCTGCCGGAACCGGCGTGTGCGGTCAGTTCCGGTGCCGCGCAGGGCCTGAGGAATGCCGCACTCCGTCCTGGCCCGTCTGCCCCCCGGCTCCGTCCGGCTCGTAGCTGCCTTCGGGCTGCTGCTCCTCGTCTCGCTGCTCGTTCTCCACCGCCGCCCCGGGAGGCCCCATGTGGCGGCGGCCGCCGCCAGCGACCGACTCACTGATCCCTCCCGGTCCCGGCTGTTCCTGTCGCAGTCCCCCGGGGCCAACGCGAGCATCGCGGCTGACCTCCGCGCGCTCACCGCGGGGCCGCACCTCGCGGGGACGCCTGCGTCGGCGGGTGCAGCCGCGCACGTGCTCGCCCGCCTCCGCGCCGCGGGACTCCAAACCCTAACGCGCGAGTACGAGCCGCTGCTCTCGTACCCTGGGCACGCCTCCCTCGCGCTGCTCCGGCCCGACGGGTCCCTGCTCGCGCGCCTGTCGCTCGAGGAGCCCGCGGACGAGGGGCGCCGCGTCGTGCCTCCGTACCACGCGTACGCGCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACGTCGTGCTCGAGAGGCTTGGAGTGGGCGTGCGCGGCCGCGTCGCGGTGGCGCGCCGCGGGGGTGGGTACCGCGGCGGGGTTGTGGCGCGCGCTGCGGACAAGGGAGCCGTCGCCGTGCTCATCGCGGGCAACGCGGACGGCGGCGTCGAGAGAGGAGTCGTTCTTCTCGGCGGCCCCGGCGATCCGCTCACCCCCGGGTGGGCCGCCACCAGCGGTGCGGAGCGTTTGAAGTTCGACGATAAGGCAGTCAAGCAGCGGTTTCCGAGTATCCCCTCCATGCCGGTGTCGGCCAAGACGGCAGCAGCGATCATTCGAAGCCTGGGCGGTCCGGCCATACCGGCGGAATGGAAGGACGGCCTCGGGGTGGATACCGGTGGTCTTGGACCTGGCCCCACGCTGGTCAACTTCACGTATCAGGAGGACAGGAAGTTTTATAAGATACGAGACATTTTTGGTATCATAAAAGGGCAAGAGGAACCTGACCGATATGTGATACTCGGTAACCACAGAGATGCATGGACCTATGGAGCAGTTGATCCTAACAGCGGGACAGCTGCACTTCTAGACATTGCTCGGCGTCTTGGAATAATGCTGCAATCAGGATGGAAACCACGGAGGTCCATCATTCTTTGTAGTTGGGACGGTGAAGAATTTGGGATGATTGGATCAACTGAATGGGTTGAAGACAACCTTGAAGATCTGCATTCCAAAGCTGTAGCTTACTTGAATGTTGATTGTGCTGTGCAAGGTGTGGGATTTTTTGCTGGTTCTACTCCCCAGTTGGACAAACTCTTGGTTGATATTACAAGACAGGTAAGGGATCCTGATGTCACGGGAAAGATGGTTCATGATACATGGAATGAAATGAGTGGCGGCATCAAAATAGAAAGGCTTGCCAGAACTGATTCCGATTTTGCTCCATTTCTACATCATGCTGGAATTCCATCTGTAGACTTGTACTACGGAGAAGAATTTCCTGGTTACCATACTGCTCTTGACACTTATAATTGGATGGAAAAGCATGGCGATCCATTCTTTCTTCGTCATTTGGCTATCACAGAAATTTGGGGACTATTAGCTCTTCGATTGGCCAATGATCCTGTGTTACCTTTTGATTATCAAGCTTACACTTCGCAGTTACAGGAGCATATAAAAACATTGTCTGCCCTGACGAGCAATGGCCATGCAGTAAATTTGATGAATGGGTGCGTCAATGATCTTTCTGGTGCAGCTATGGAAGTTCTGAAGGAGATGAAGAAACTACAGCAGATGGATTTATATGATGAACACGCCAGGATGAGAAGGCGATTGTTGAACGATCGCCTCCTACTTGCTGAAAGAAGCTTCCTGCAACCTGAAGGGCTCCAAGGAAGAGGATGGTTTAAGCATCTGTTGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTGTCGTTCTTCCCTGGGATCGCTGACGCCATCTCACGGTCCGCCAATCTGAGTGACAAGGAACAGGAGGTGGCAATGCAGCATGAAGTGTGGAAAGTCTGCCGTGCGATTCAAAGGGCTGCGAGTGTTCTTAGAGGTGAATTCAGTGAGCAAAAACCGACGAATTTTAGTTCTTTGGTGACCCCATGAGATGTGTTTGTGCAAACAAATAACAAACAATGGTTATTTAGTATCTGCGCGAAATGGAAGTGTGATGAAGAATGTGATGCTTTTGGGCGTACACTTTACAGCGCAGCGTTGGGGCAGCAGCGAGTAGAGGGC
  • >Zm00001eb060200_T001
    AGCACCCAGGAAAGCATCCTGGCTCCTGTCCCTCCTCGCCATTTCACGAGCTCCCATTTCACACGCTCACTCCGTCACTCGCTCGCCTCCGCCGTCGCAAAGCCTGCCGGAACCGGCGTGTGCGGTCAGTTCCGGTGCCGCGCAGGGCCTGAGGAATGCCGCACTCCGTCCTGGCCCGTCTGCCCCCCGGCTCCGTCCGGCTCGTAGCTGCCTTCGGGCTGCTGCTCCTCGTCTCGCTGCTCGTTCTCCACCGCCGCCCCGGGAGGCCCCATGTGGCGGCGGCCGCCGCCAGCGACCGACTCACTGATCCCTCCCGGTCCCGGCTGTTCCTGTCGCAGTCCCCCGGGGCCAACGCGAGCATCGCGGCTGACCTCCGCGCGCTCACCGCGGGGCCGCACCTCGCGGGGACGCCTGCGTCGGCGGGTGCAGCCGCGCACGTGCTCGCCCGCCTCCGCGCCGCGGGACTCCAAACCCTAACGCGCGAGTACGAGCCGCTGCTCTCGTACCCTGGGCACGCCTCCCTCGCGCTGCTCCGGCCCGACGGGTCCCTGCTCGCGCGCCTGTCGCTCGAGGAGCCCGCGGACGAGGGGCGCCGCGTCGTGCCTCCGTACCACGCGTACGCGCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACGTCGTGCTCGAGAGGCTTGGAGTGGGCGTGCGCGGCCGCGTCGCGGTGGCGCGCCGCGGGGGTGGGTACCGCGGCGGGGTTGTGGCGCGCGCTGCGGACAAGGGAGCCGTCGCCGTGCTCATCGCGGGCAACGCGGACGGCGGCGTCGAGAGAGGAGTCGTTCTTCTCGGCGGCCCCGGCGATCCGCTCACCCCCGGGTGGGCCGCCACCAGCGGTGCGGAGCGTTTGAAGTTCGACGATAAGGCAGTCAAGCAGCGGTTTCCGAGTATCCCCTCCATGCCGGTGTCGGCCAAGACGGCAGCAGCGATCATTCGAAGCCTGGGCGGTCCGGCCATACCGGCGGAATGGAAGGACGGCCTCGGGGTGGATACCGGTGGTCTTGGACCTGGCCCCACGCTGGTCAACTTCACGTATCAGGAGGACAGGAAGTTTTATAAGATACGAGACATTTTTGGTATCATAAAAGGGCAAGAGGAACCTGACCGATATGTGATACTCGGTAACCACAGAGATGCATGGACCTATGGAGCAGTTGATCCTAACAGCGGGACAGCTGCACTTCTAGACATTGCTCGGCGTCTTGGAATAATGCTGCAATCAGGATGGAAACCACGGAGGTCCATCATTCTTTGTAGTTGGGACGGTGAAGAATTTGGGATGATTGGATCAACTGAATGGGTTGAAGACAACCTTGAAGATCTGCATTCCAAAGCTGTAGCTTACTTGAATGTTGATTGTGCTGTGCAAGGTGTGGGATTTTTTGCTGGTTCTACTCCCCAGTTGGACAAACTCTTGGTTGATATTACAAGACAGGTAAGGGATCCTGATGTCACGGGAAAGATGGTTCATGATACATGGAATGAAATGAGTGGCGGCATCAAAATAGAAAGGCTTGCCAGAACTGATTCCGATTTTGCTCCATTTCTACATCATGCTGGAATTCCATCTGTAGACTTGTACTACGGAGAAGAATTTCCTGGTTACCATACTGCTCTTGACACTTATAATTGGATGGAAAAGCATGGCGATCCATTCTTTCTTCGTCATTTGGCTATCACAGAAATTTGGGGACTATTAGCTCTTCGATTGGCCAATGATCCTGTGTTACCTTTTGATTATCAAGCTTACACTTCGCAGTTACAGGAGCATATAAAAACATTGTCTGCCCTGACGAGCAATGGCCATGCAGTAAATTTGATGAATGGGTGCGTCAATGATCTTTCTGGTGCAGCTATGGAAGTTCTGAAGGAGATGAAGAAACTACAGCAGATGGATTTATATGATGAACACGCCAGGATGAGAAGGCGATTGTTGAACGATCGCCTCCTACTTGCTGAAAGAAGCTTCCTGCAACCTGAAGGGCTCCAAGGAAGAGGATGGTTTAAGCATCTGTTGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTGTCGTTCTTCCCTGGGATCGCTGACGCCATCTCACGGTCCGCCAATCTGAGTGACAAGGAACAGGAGGTGGCAATGCAGCATGAAGTGTGGAAAGTCTGCCGTGCGATTCAAAGGGCTGCGAGTGTTCTTAGAGGTGAATTCAGTGAGCAAAAACCGACGAATTTTAGTTCTTTGGTGACCCCATGAGATGTGTTTGTGCAAACAAATAACAAACAATGGTTATTTAGTATCTGCGCGAAATGGAAGTGTGATGAAGAATGTGATGCTTTTGGGCGTACACTTTACAGCGCAGCGTTGGGGCAGCAGCGAGTAGAGGGC
CDS Sequence
  • >Zm00001eb060200_T002
    ATGCCGCACTCCGTCCTGGCCCGTCTGCCCCCCGGCTCCGTCCGGCTCGTAGCTGCCTTCGGGCTGCTGCTCCTCGTCTCGCTGCTCGTTCTCCACCGCCGCCCCGGGAGGCCCCATGTGGCGGCGGCCGCCGCCAGCGACCGACTCACTGATCCCTCCCGGTCCCGGCTGTTCCTGTCGCAGTCCCCCGGGGCCAACGCGAGCATCGCGGCTGACCTCCGCGCGCTCACCGCGGGGCCGCACCTCGCGGGGACGCCTGCGTCGGCGGGTGCAGCCGCGCACGTGCTCGCCCGCCTCCGCGCCGCGGGACTCCAAACCCTAACGCGCGAGTACGAGCCGCTGCTCTCGTACCCTGGGCACGCCTCCCTCGCGCTGCTCCGGCCCGACGGGTCCCTGCTCGCGCGCCTGTCGCTCGAGGAGCCCGCGGACGAGGGGCGCCGCGTCGTGCCTCCGTACCACGCGTACGCGCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACGTCGTGCTCGAGAGGCTTGGAGTGGGCGTGCGCGGCCGCGTCGCGGTGGCGCGCCGCGGGGGTGGGTACCGCGGCGGGGTTGTGGCGCGCGCTGCGGACAAGGGAGCCGTCGCCGTGCTCATCGCGGGCAACGCGGACGGCGGCGTCGAGAGAGGAGTCGTTCTTCTCGGCGGCCCCGGCGATCCGCTCACCCCCGGGTGGGCCGCCACCAGCGGTGCGGAGCGTTTGAAGTTCGACGATAAGGCAGTCAAGCAGCGGTTTCCGAGTATCCCCTCCATGCCGGTGTCGGCCAAGACGGCAGCAGCGATCATTCGAAGCCTGGGCGGTCCGGCCATACCGGCGGAATGGAAGGACGGCCTCGGGGTGGATACCGGTGGTCTTGGACCTGGCCCCACGCTGGTCAACTTCACGTATCAGGAGGACAGGAAGTTTTATAAGATACGAGACATTTTTGGTATCATAAAAGGGCAAGAGGAACCTGACCGATATGTGATACTCGGTAACCACAGAGATGCATGGACCTATGGAGCAGTTGATCCTAACAGCGGGACAGCTGCACTTCTAGACATTGCTCGGCGTCTTGGAATAATGCTGCAATCAGGATGGAAACCACGGAGGTCCATCATTCTTTGTAGTTGGGACGGTGAAGAATTTGGGATGATTGGATCAACTGAATGGGTTGAAGACAACCTTGAAGATCTGCATTCCAAAGCTGTAGCTTACTTGAATGTTGATTGTGCTGTGCAAGGTGTGGGATTTTTTGCTGGTTCTACTCCCCAGTTGGACAAACTCTTGGTTGATATTACAAGACAGGTAAGGGATCCTGATGTCACGGGAAAGATGGTTCATGATACATGGAATGAAATGAGTGGCGGCATCAAAATAGAAAGGCTTGCCAGAACTGATTCCGATTTTGCTCCATTTCTACATCATGCTGGAATTCCATCTGTAGACTTGTACTACGGAGAAGAATTTCCTGGTTACCATACTGCTCTTGACACTTATAATTGGATGGAAAAGCATGGCGATCCATTCTTTCTTCGTCATTTGGCTATCACAGAAATTTGGGGACTATTAGCTCTTCGATTGGCCAATGATCCTGTGTTACCTTTTGATTATCAAGCTTACACTTCGCAGTTACAGGAGCATATAAAAACATTGTCTGCCCTGACGAGCAATGGCCATGCAGTAAATTTGATGAATGGGTGCGTCAATGATCTTTCTGGTGCAGCTATGGAAGTTCTGAAGGAGATGAAGAAACTACAGCAGATGGATTTATATGATGAACACGCCAGGATGAGAAGGCGATTGTTGAACGATCGCCTCCTACTTGCTGAAAGAAGCTTCCTGCAACCTGAAGGGCTCCAAGGAAGAGGATGGTTTAAGCATCTGTTGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTGTCGTTCTTCCCTGGGATCGCTGACGCCATCTCACGGTCCGCCAATCTGAGTGACAAGGAACAGGAGGTGGCAATGCAGCATGAAGTGTGGAAAGTCTGCCGTGCGATTCAAAGGGCTGCGAGTGTTCTTAGAGGTGAATTCAGTGAGCAAAAACCGACGAATTTTAGTTCTTTGGTGACCCCATGA
  • >Zm00001eb060200_T001
    ATGCCGCACTCCGTCCTGGCCCGTCTGCCCCCCGGCTCCGTCCGGCTCGTAGCTGCCTTCGGGCTGCTGCTCCTCGTCTCGCTGCTCGTTCTCCACCGCCGCCCCGGGAGGCCCCATGTGGCGGCGGCCGCCGCCAGCGACCGACTCACTGATCCCTCCCGGTCCCGGCTGTTCCTGTCGCAGTCCCCCGGGGCCAACGCGAGCATCGCGGCTGACCTCCGCGCGCTCACCGCGGGGCCGCACCTCGCGGGGACGCCTGCGTCGGCGGGTGCAGCCGCGCACGTGCTCGCCCGCCTCCGCGCCGCGGGACTCCAAACCCTAACGCGCGAGTACGAGCCGCTGCTCTCGTACCCTGGGCACGCCTCCCTCGCGCTGCTCCGGCCCGACGGGTCCCTGCTCGCGCGCCTGTCGCTCGAGGAGCCCGCGGACGAGGGGCGCCGCGTCGTGCCTCCGTACCACGCGTACGCGCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACGTCGTGCTCGAGAGGCTTGGAGTGGGCGTGCGCGGCCGCGTCGCGGTGGCGCGCCGCGGGGGTGGGTACCGCGGCGGGGTTGTGGCGCGCGCTGCGGACAAGGGAGCCGTCGCCGTGCTCATCGCGGGCAACGCGGACGGCGGCGTCGAGAGAGGAGTCGTTCTTCTCGGCGGCCCCGGCGATCCGCTCACCCCCGGGTGGGCCGCCACCAGCGGTGCGGAGCGTTTGAAGTTCGACGATAAGGCAGTCAAGCAGCGGTTTCCGAGTATCCCCTCCATGCCGGTGTCGGCCAAGACGGCAGCAGCGATCATTCGAAGCCTGGGCGGTCCGGCCATACCGGCGGAATGGAAGGACGGCCTCGGGGTGGATACCGGTGGTCTTGGACCTGGCCCCACGCTGGTCAACTTCACGTATCAGGAGGACAGGAAGTTTTATAAGATACGAGACATTTTTGGTATCATAAAAGGGCAAGAGGAACCTGACCGATATGTGATACTCGGTAACCACAGAGATGCATGGACCTATGGAGCAGTTGATCCTAACAGCGGGACAGCTGCACTTCTAGACATTGCTCGGCGTCTTGGAATAATGCTGCAATCAGGATGGAAACCACGGAGGTCCATCATTCTTTGTAGTTGGGACGGTGAAGAATTTGGGATGATTGGATCAACTGAATGGGTTGAAGACAACCTTGAAGATCTGCATTCCAAAGCTGTAGCTTACTTGAATGTTGATTGTGCTGTGCAAGGTGTGGGATTTTTTGCTGGTTCTACTCCCCAGTTGGACAAACTCTTGGTTGATATTACAAGACAGGTAAGGGATCCTGATGTCACGGGAAAGATGGTTCATGATACATGGAATGAAATGAGTGGCGGCATCAAAATAGAAAGGCTTGCCAGAACTGATTCCGATTTTGCTCCATTTCTACATCATGCTGGAATTCCATCTGTAGACTTGTACTACGGAGAAGAATTTCCTGGTTACCATACTGCTCTTGACACTTATAATTGGATGGAAAAGCATGGCGATCCATTCTTTCTTCGTCATTTGGCTATCACAGAAATTTGGGGACTATTAGCTCTTCGATTGGCCAATGATCCTGTGTTACCTTTTGATTATCAAGCTTACACTTCGCAGTTACAGGAGCATATAAAAACATTGTCTGCCCTGACGAGCAATGGCCATGCAGTAAATTTGATGAATGGGTGCGTCAATGATCTTTCTGGTGCAGCTATGGAAGTTCTGAAGGAGATGAAGAAACTACAGCAGATGGATTTATATGATGAACACGCCAGGATGAGAAGGCGATTGTTGAACGATCGCCTCCTACTTGCTGAAAGAAGCTTCCTGCAACCTGAAGGGCTCCAAGGAAGAGGATGGTTTAAGCATCTGTTGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTGTCGTTCTTCCCTGGGATCGCTGACGCCATCTCACGGTCCGCCAATCTGAGTGACAAGGAACAGGAGGTGGCAATGCAGCATGAAGTGTGGAAAGTCTGCCGTGCGATTCAAAGGGCTGCGAGTGTTCTTAGAGGTGAATTCAGTGAGCAAAAACCGACGAATTTTAGTTCTTTGGTGACCCCATGA
Protein Sequence
  • >Zm00001eb060200_P002
    MPHSVLARLPPGSVRLVAAFGLLLLVSLLVLHRRPGRPHVAAAAASDRLTDPSRSRLFLSQSPGANASIAADLRALTAGPHLAGTPASAGAAAHVLARLRAAGLQTLTREYEPLLSYPGHASLALLRPDGSLLARLSLEEPADEGRRVVPPYHAYAPSGGAVAEAVFVNLGREEDYVVLERLGVGVRGRVAVARRGGGYRGGVVARAADKGAVAVLIAGNADGGVERGVVLLGGPGDPLTPGWAATSGAERLKFDDKAVKQRFPSIPSMPVSAKTAAAIIRSLGGPAIPAEWKDGLGVDTGGLGPGPTLVNFTYQEDRKFYKIRDIFGIIKGQEEPDRYVILGNHRDAWTYGAVDPNSGTAALLDIARRLGIMLQSGWKPRRSIILCSWDGEEFGMIGSTEWVEDNLEDLHSKAVAYLNVDCAVQGVGFFAGSTPQLDKLLVDITRQVRDPDVTGKMVHDTWNEMSGGIKIERLARTDSDFAPFLHHAGIPSVDLYYGEEFPGYHTALDTYNWMEKHGDPFFLRHLAITEIWGLLALRLANDPVLPFDYQAYTSQLQEHIKTLSALTSNGHAVNLMNGCVNDLSGAAMEVLKEMKKLQQMDLYDEHARMRRRLLNDRLLLAERSFLQPEGLQGRGWFKHLLYSPPEDYESKLSFFPGIADAISRSANLSDKEQEVAMQHEVWKVCRAIQRAASVLRGEFSEQKPTNFSSLVTP
  • >Zm00001eb060200_P001
    MPHSVLARLPPGSVRLVAAFGLLLLVSLLVLHRRPGRPHVAAAAASDRLTDPSRSRLFLSQSPGANASIAADLRALTAGPHLAGTPASAGAAAHVLARLRAAGLQTLTREYEPLLSYPGHASLALLRPDGSLLARLSLEEPADEGRRVVPPYHAYAPSGGAVAEAVFVNLGREEDYVVLERLGVGVRGRVAVARRGGGYRGGVVARAADKGAVAVLIAGNADGGVERGVVLLGGPGDPLTPGWAATSGAERLKFDDKAVKQRFPSIPSMPVSAKTAAAIIRSLGGPAIPAEWKDGLGVDTGGLGPGPTLVNFTYQEDRKFYKIRDIFGIIKGQEEPDRYVILGNHRDAWTYGAVDPNSGTAALLDIARRLGIMLQSGWKPRRSIILCSWDGEEFGMIGSTEWVEDNLEDLHSKAVAYLNVDCAVQGVGFFAGSTPQLDKLLVDITRQVRDPDVTGKMVHDTWNEMSGGIKIERLARTDSDFAPFLHHAGIPSVDLYYGEEFPGYHTALDTYNWMEKHGDPFFLRHLAITEIWGLLALRLANDPVLPFDYQAYTSQLQEHIKTLSALTSNGHAVNLMNGCVNDLSGAAMEVLKEMKKLQQMDLYDEHARMRRRLLNDRLLLAERSFLQPEGLQGRGWFKHLLYSPPEDYESKLSFFPGIADAISRSANLSDKEQEVAMQHEVWKVCRAIQRAASVLRGEFSEQKPTNFSSLVTP

Source: Genetic information comes from the article