Information report for ZmAGO18b
Gene Details
|
|
Functional Descriptions
- ZmAGO18b negatively regulates maize resistance against southern leaf blight.
- Overexpression of ZmAGO18b gene suppresses maize resistance against C. heterostrophus, and mutation of ZmAGO18b enhances maize resistance against C. heterostrophus.
- We identified the resistant haplotype of ZmAGO18b by association analysis of natural variation in ZmAGO18b genomic DNA sequences with seedling resistance phenotypes against C. heterostrophus and confirmed the resistant haplotype is co-segregated with resistance phenotypes against C. heterostrophus in two F2 populations.
- AGO18b is a negative regulator of the determinacy of inflorescence and axillary meristems, and that it acts by interacting with the miR166-HD-ZIP III TF regulatory pathway.
- AGO18b negatively regulates determinacy of spikelet meristems on the tassel central spike in maize.
Functional Keywords
- leaf , resistance , seedling , blight , resistant
Literature and News
- ZmAGO18b negatively regulates maize resistance against southern leaf blight. DOI: 10.1007/s00122-023-04405-y ; PMID: 37341790
- Maize germinal cell initials accommodate hypoxia and precociously express meiotic genes. DOI: 10.1111/tpj.12414 ; PMID: 24387628
- AGO18b negatively regulates determinacy of spikelet meristems on the tassel central spike in maize. DOI: 10.1111/jipb.12596 ; PMID: 28875539
Gene Resources
- NCBI ID: LOC100279313
- UniProt accessions: A0A1D6KWX6
- EMBL: CM007647
- AlphaFoldDB: A0A1D6KWX6
- InterPro: IPR003100 , IPR003165 , IPR012337 , IPR014811 , IPR032473 , IPR032474 , IPR036085 , IPR036397 , IPR045246
- PANTHER: PTHR22891
- SUPFAM: SSF101690 , SSF53098
- PROSITE: PS50821 , PS50822
- Gene3D: 2.170.260.10 , 3.30.420.10 , 3.40.50.2300
- SMR: A0A1D6KWX6
- CDD: cd02846 , cd04657
Homologs
- Arabidopsis thaliana: AT2G27880, AT2G27040, AT2G32940
- Malus domestica: MDP0000285251
- Musa acuminata: GSMUA_Achr6P04510_001
- Oryza sativa: AGO18;OsAGO18, OsAGO1b, OsAGO1a, OsAGO1d, OsPNH1, OsAGO1c, MEL1, OsAGO17, OsAGO7;shl4, OsAGO2
- Triticum aestivum: TaAGO1b, TaAGO4, Traes_5AL_481F73E59
Sequences
cDNA Sequence
- >Zm00001eb050240_T001
AACACTAGAACTAACTCATCTCTTCCTCTCCATTGCATTTTCTTCTTCCTCCAAATACGTAACAAACTTCTACGTGAGCGCCAGGGCAGTTGCGCCCATGGGAAGGCATCCGCCTGTCGATGAGGCGATGGACTTCAACGGCAACGGACGGGACGAGGCAAACCCGAGCGGCTCTGAGGCGGGGAACCACAACGAGCACCGCGGCGACGACCCCTCGCGCGTTGGCCAGAGCCTGCCCGCCGATATCCGCCAAAATGGGCAGCCAACCCTCGGGGAGGAGATCACCGCGCCGCTGTGGGAGGAGTTCGAGGCGCTCGGCATCCACGTCCGCCGCTCCGAGCCCGTGTTCCCGCCGCGCCCAGGGTACGGCGCCGCGGGGACGCCGTACGTCGTCAGGGCCAACCTCTTCCTCGGTCGCCTCGTCGACGAGGCCCTGCATCAGTACAACGTAACCATTTCGCCCGAGCCGACGCCCAAGGCCGCGTACAGAGAGATCATGACGAAGCTGTTGTCCGAGAACCAGCACACGGATTTCGACGGCCGCTTCTCCGTGTACGATGACGGTGACTCGCTCTTCACAGCCGGTGCGCTGCCGTTCGACACCAAGGAGTTCGAGGTCCCCCTCTCTGCAGGCGGCGACGAAAAGATGGACAGGAAGTACAAGGTGATGATCAACCATGCCGCAACGATTAGTCTGCTACAGCTGAGGATGCTGTTAGCGGGCTATCCCACGGACATCCCCGCGCAGGCGCTCGTGGTCCTCGACACCGTGCTGCGTGACGTCTTCAACGAACGCAATGACATGGAATGCGTCGTGATTGACAAAAAGGATCGCACACTGGGTGTTGACGCATGGAAGGGGCTCTATCTGAGCATCAGGCCAACACAGAACTGCTTGTCTCTGATTGCAGACGTGTCCTCATCTGTATTCGTTCAACCCCTGCTATTGATTGAATTCGTTCAGAAGATCCTAAAGATAGATGCCGTGGATAGGAACTTGACTAAACCTGAGTATGACAAGCTCTTGAAGGCCCTCAGGGGTGTGAGGATTCAAGTCACACACAGAGATAATAGACGCCGAGTATGGTCAAAGAAAAAAGATAATAGACGCCAACTCTCTACGTACAGAGTTGCTGGCTTGTCAGTGAATCCTACTAATGATTTGAGTTTTGAATCAAAGGTTGGAGTCACAACGACTGTGATTGATTACTTCAGAGAAATATACGGCCTGGAACTGAAATACAAATATCTCCCATGCGTCAATGCTGGCAGCGAGCAGGATCCAATCTATTTTCCTATAGAGGTTTGCAAGATAGCTCCCAAGCAGTGTTACCAGAAGAAGCTGGAAGGTAGTCAGTTTTCTACTCCAAGGAAGTCAGCCTGGATCCATCCTGAAGCCGAGCAATCCTGTCCTCAGATTGTTGAGCAGAGGCAGTACAAACAAACCAAACGTGCAAATGAATTTGACTTAGAATTTGATGGCAATCTTACAACAGTTGCTGCTAGAGTTCTGCTGCCTCCAAATCTTAAGTATGATGATTCTGTATCACAGAAAACATGGTTTCCACTGGATGGGTACTGGAATATGAAAGACAAGAAAGTAATAAATGGTGCCAAGATCAGAAACTGGGCATGTCTTAATTTTTGTGAAGATTTATCCAAGGAAGATATTAAGAAGTTTTGCTTTAAGCTGGCTGAAATGTCTCGTATTACTGGACTGGACTTTGCCGATTTGAAGCTCCCAATATTCACTGCACGTCCAGATCGAGTTGAAGATGGTATTCGTAGGTGCTATCAGGAAGCGAAGAACAAGCTAAGGGATCAGAAGATTGATTTACTGCTTGCTATACTACCAGATAAAAAAGACAGTTTATATGGAAATATTAAAAGGATCTGTGAGACAGATATTGGTCTTGTGTCACAGTGTTGTCGAAGGTCAAGAGTCTTAGTGAATAATAATCAGATATTGGCAAATATTGCTATTAAGATCAATGCCAAGGTTGGAGGAAGAATCTCAGTATTCGATGACGTACAGAAGAGTTTACCGGTTGTTTCAAATAAGCCAACAATTATATTTGGTGCTCATGTTTCTCACCCTTCTGTTGTAGATGGTTCTACTGGCCCTTCTATTGCTTCTGTCGTTGCATCCCAAGACTGGCATGAGGTGTCTAAGTATAATGGTGTTGTTCGTGCACAAGGTCACACTGAAGAGATCGGTGGCCTTGAAGACATTGTCAAGGAGCTCCTTCATGCATTTGCAAACGAGTCCAAGGAGAAGCTCCAGCAGCTGATATTCTACAGGGATGGCATAAGTGAGGGTCAATTCAATCGAATTTTGGAGAAAGAAATCCCAGCGATAGAAAAGGCTTGGAACGCACTGTATGACAATGAGAAGCCACAAATCACCTTCGTTGTTGTGCAGAAGAGGCATAAACTGAGGCTGTTCCCCGTGGACGACAACTATAAGATCCGTTCTGCTAAGAAGAAAATTGTTGAGCCTGGCACAGTGGTTGATAGTGAGATCTGTCACCCAGCAGAATTTGATTTCTTCCTTTGCAGCCAATCTGGTGGTATCAAAGGCCCAAGGCGTCCTGTGAGGTACCTTGTACTGCGAGATGATAACAACTTCACGGCAGATGAACTGCAGGCTCTCACAAATAACCTGTGCTACACTTATTCAGGCGGCAATCGTTCGTTGTCGGTCGCTCCTCCCGCATACTACGCCCAAAAGCTCGCACATCGGGCCCGCGTCTACCTCGCCAAAGGCTCGGACAATAATGCAGCTGCTGCTAATGGTGGTCGGAAGCAAATTCCAGAGATAAAGAATGAGCTGAAGGGGTCCATGTTCTACTGCTAGTCCTTTGCCTGCTGAACGGACGATGCATTGTTCTATAGTGAAAGACTTGAGTGTGCTCTGAGTCTCTGACTGACATCTGGAGAAGGATGGCATCTGCAATAGTCGCCGTGTTCTTTTTAGTACACTAGAATAAATGGATGTTTTTTGTGGACGCCCATGTTGAACTAGTTTTCTTTTCCAGTAAGTACTTCAGAATGAGTGAGATAAATATATCATTCAGCGTCTGGTGGTCTGGCATTGGAATTCAACCAGCATGGCCTGCCTTGTTATCCACCTGATTGGTTACCCGCATCATTTTGATGCTATTAACATTCACCCACCAT
CDS Sequence
- >Zm00001eb050240_T001
ATGGGAAGGCATCCGCCTGTCGATGAGGCGATGGACTTCAACGGCAACGGACGGGACGAGGCAAACCCGAGCGGCTCTGAGGCGGGGAACCACAACGAGCACCGCGGCGACGACCCCTCGCGCGTTGGCCAGAGCCTGCCCGCCGATATCCGCCAAAATGGGCAGCCAACCCTCGGGGAGGAGATCACCGCGCCGCTGTGGGAGGAGTTCGAGGCGCTCGGCATCCACGTCCGCCGCTCCGAGCCCGTGTTCCCGCCGCGCCCAGGGTACGGCGCCGCGGGGACGCCGTACGTCGTCAGGGCCAACCTCTTCCTCGGTCGCCTCGTCGACGAGGCCCTGCATCAGTACAACGTAACCATTTCGCCCGAGCCGACGCCCAAGGCCGCGTACAGAGAGATCATGACGAAGCTGTTGTCCGAGAACCAGCACACGGATTTCGACGGCCGCTTCTCCGTGTACGATGACGGTGACTCGCTCTTCACAGCCGGTGCGCTGCCGTTCGACACCAAGGAGTTCGAGGTCCCCCTCTCTGCAGGCGGCGACGAAAAGATGGACAGGAAGTACAAGGTGATGATCAACCATGCCGCAACGATTAGTCTGCTACAGCTGAGGATGCTGTTAGCGGGCTATCCCACGGACATCCCCGCGCAGGCGCTCGTGGTCCTCGACACCGTGCTGCGTGACGTCTTCAACGAACGCAATGACATGGAATGCGTCGTGATTGACAAAAAGGATCGCACACTGGGTGTTGACGCATGGAAGGGGCTCTATCTGAGCATCAGGCCAACACAGAACTGCTTGTCTCTGATTGCAGACGTGTCCTCATCTGTATTCGTTCAACCCCTGCTATTGATTGAATTCGTTCAGAAGATCCTAAAGATAGATGCCGTGGATAGGAACTTGACTAAACCTGAGTATGACAAGCTCTTGAAGGCCCTCAGGGGTGTGAGGATTCAAGTCACACACAGAGATAATAGACGCCGAGTATGGTCAAAGAAAAAAGATAATAGACGCCAACTCTCTACGTACAGAGTTGCTGGCTTGTCAGTGAATCCTACTAATGATTTGAGTTTTGAATCAAAGGTTGGAGTCACAACGACTGTGATTGATTACTTCAGAGAAATATACGGCCTGGAACTGAAATACAAATATCTCCCATGCGTCAATGCTGGCAGCGAGCAGGATCCAATCTATTTTCCTATAGAGGTTTGCAAGATAGCTCCCAAGCAGTGTTACCAGAAGAAGCTGGAAGGTAGTCAGTTTTCTACTCCAAGGAAGTCAGCCTGGATCCATCCTGAAGCCGAGCAATCCTGTCCTCAGATTGTTGAGCAGAGGCAGTACAAACAAACCAAACGTGCAAATGAATTTGACTTAGAATTTGATGGCAATCTTACAACAGTTGCTGCTAGAGTTCTGCTGCCTCCAAATCTTAAGTATGATGATTCTGTATCACAGAAAACATGGTTTCCACTGGATGGGTACTGGAATATGAAAGACAAGAAAGTAATAAATGGTGCCAAGATCAGAAACTGGGCATGTCTTAATTTTTGTGAAGATTTATCCAAGGAAGATATTAAGAAGTTTTGCTTTAAGCTGGCTGAAATGTCTCGTATTACTGGACTGGACTTTGCCGATTTGAAGCTCCCAATATTCACTGCACGTCCAGATCGAGTTGAAGATGGTATTCGTAGGTGCTATCAGGAAGCGAAGAACAAGCTAAGGGATCAGAAGATTGATTTACTGCTTGCTATACTACCAGATAAAAAAGACAGTTTATATGGAAATATTAAAAGGATCTGTGAGACAGATATTGGTCTTGTGTCACAGTGTTGTCGAAGGTCAAGAGTCTTAGTGAATAATAATCAGATATTGGCAAATATTGCTATTAAGATCAATGCCAAGGTTGGAGGAAGAATCTCAGTATTCGATGACGTACAGAAGAGTTTACCGGTTGTTTCAAATAAGCCAACAATTATATTTGGTGCTCATGTTTCTCACCCTTCTGTTGTAGATGGTTCTACTGGCCCTTCTATTGCTTCTGTCGTTGCATCCCAAGACTGGCATGAGGTGTCTAAGTATAATGGTGTTGTTCGTGCACAAGGTCACACTGAAGAGATCGGTGGCCTTGAAGACATTGTCAAGGAGCTCCTTCATGCATTTGCAAACGAGTCCAAGGAGAAGCTCCAGCAGCTGATATTCTACAGGGATGGCATAAGTGAGGGTCAATTCAATCGAATTTTGGAGAAAGAAATCCCAGCGATAGAAAAGGCTTGGAACGCACTGTATGACAATGAGAAGCCACAAATCACCTTCGTTGTTGTGCAGAAGAGGCATAAACTGAGGCTGTTCCCCGTGGACGACAACTATAAGATCCGTTCTGCTAAGAAGAAAATTGTTGAGCCTGGCACAGTGGTTGATAGTGAGATCTGTCACCCAGCAGAATTTGATTTCTTCCTTTGCAGCCAATCTGGTGGTATCAAAGGCCCAAGGCGTCCTGTGAGGTACCTTGTACTGCGAGATGATAACAACTTCACGGCAGATGAACTGCAGGCTCTCACAAATAACCTGTGCTACACTTATTCAGGCGGCAATCGTTCGTTGTCGGTCGCTCCTCCCGCATACTACGCCCAAAAGCTCGCACATCGGGCCCGCGTCTACCTCGCCAAAGGCTCGGACAATAATGCAGCTGCTGCTAATGGTGGTCGGAAGCAAATTCCAGAGATAAAGAATGAGCTGAAGGGGTCCATGTTCTACTGCTAG
Protein Sequence
- >Zm00001eb050240_P001
MGRHPPVDEAMDFNGNGRDEANPSGSEAGNHNEHRGDDPSRVGQSLPADIRQNGQPTLGEEITAPLWEEFEALGIHVRRSEPVFPPRPGYGAAGTPYVVRANLFLGRLVDEALHQYNVTISPEPTPKAAYREIMTKLLSENQHTDFDGRFSVYDDGDSLFTAGALPFDTKEFEVPLSAGGDEKMDRKYKVMINHAATISLLQLRMLLAGYPTDIPAQALVVLDTVLRDVFNERNDMECVVIDKKDRTLGVDAWKGLYLSIRPTQNCLSLIADVSSSVFVQPLLLIEFVQKILKIDAVDRNLTKPEYDKLLKALRGVRIQVTHRDNRRRVWSKKKDNRRQLSTYRVAGLSVNPTNDLSFESKVGVTTTVIDYFREIYGLELKYKYLPCVNAGSEQDPIYFPIEVCKIAPKQCYQKKLEGSQFSTPRKSAWIHPEAEQSCPQIVEQRQYKQTKRANEFDLEFDGNLTTVAARVLLPPNLKYDDSVSQKTWFPLDGYWNMKDKKVINGAKIRNWACLNFCEDLSKEDIKKFCFKLAEMSRITGLDFADLKLPIFTARPDRVEDGIRRCYQEAKNKLRDQKIDLLLAILPDKKDSLYGNIKRICETDIGLVSQCCRRSRVLVNNNQILANIAIKINAKVGGRISVFDDVQKSLPVVSNKPTIIFGAHVSHPSVVDGSTGPSIASVVASQDWHEVSKYNGVVRAQGHTEEIGGLEDIVKELLHAFANESKEKLQQLIFYRDGISEGQFNRILEKEIPAIEKAWNALYDNEKPQITFVVVQKRHKLRLFPVDDNYKIRSAKKKIVEPGTVVDSEICHPAEFDFFLCSQSGGIKGPRRPVRYLVLRDDNNFTADELQALTNNLCYTYSGGNRSLSVAPPAYYAQKLAHRARVYLAKGSDNNAAAANGGRKQIPEIKNELKGSMFYC