Information report for ZmAFB1;tir1
Gene Details
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Functional Descriptions
- After transportation to the target sites, auxin binds to the receptor TRANSPORT INHIBITOR RESPONSE1 (tir1) or AUXIN-related F-BOX (AFB) proteins, which facilitate the degradation of AUXIN/INDOLE-3-ACETIC ACID (AUX/IAA) repressors and disrupt the recruitment of TOPLESS (TPL) corepressors, and as a result, AUXIN RESPONSE FACTOR (ARF) transcription factors (TFs) are released from the repressor complex and activate downstream genes.
- tir1 encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC103635896
- UniProt accessions: K7UXQ0
- EMBL: CM000784
- EnsemblPlants: Zm00001eb354200_T001
- Gramene: Zm00001eb354200_T001
- KEGG: zma:103635896
- OMA: TDDCLEM
- ExpressionAtlas: Zm00001eb354200
- InterPro: IPR001611 , IPR006553 , IPR032675 , IPR036047 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF66
- SUPFAM: SSF52047 , SSF81383
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: K7UXQ0
- SMR: K7UXQ0
Sequences
cDNA Sequence
- >Zm00001eb354200_T001
AGAGCAGTATTTTAAAGTAGCAAAGAGAAGAAGCCTGGGGGAGAGAGAGACGAGAGCAGGAGACAGAGGGGCTCCCCCCCCACCCCCGAGCCCAAACGCAGCTAGCTCCCCATTCCACCCAAGCTCCCGCAGCCAGATGCTCTCCCCCGCTCGAGCCCCACCGCCGCCGCCCGTCCCCGCCGCCGGGTAGACCGCCCGATCCGACGGCGCCCGCCGCACCCATGGGCCGCGGCGGCGCGCGCGCGGCCCCCGCCGCCGCGGTGCCGCCCTGGCACGCGCTCCCGGACGAGGTCTGGGAGCACGCCTTCTCCTTCCTCCCCGCGGACTCGGACCGGGGCGCCGCCGCGTGCGCCTGCCACGCCTGGCTCCGCTTCGAGCGCCGCTCGCGCCGCCGCCTTGCCGTCGCCAACTGCTACGCCGCGTCCCCGCGCGACGCCGTCGAGCGCTTCCCCGCCGTCCGCGCCGTCGAGGTCAAGGGCAAGCCCCACTTCGCCGACTTCGGCCTCGTTCCGCCCGCCTGGGGCGCCGACGCCGCGCCCTGGGTCGCCGCCGCCGCCGCCGGCTGGCCGCTGCTCGAGGAGATTAGCTTTAAGCGCATGGTCGTCACCGACGACTGCCTCGAGATGATCGCGGCCTCCTTCAGGAACTTCCAGGTGCTGCGCCTCGTCTCCTGCGAGGGCTTCAGTACAGCCGGCCTCGCTGCCATTGCCGCTGCTTGCAGAAATCTAAGAGAACTTGACCTTCAGGAGAATGAGATTGAGGATTGCTCTATTCATTGGCTCAGTCTATTTCCAGTATCTTTCACTTCTTTGGTAACTCTAAATTTTTCATGCCTAGAGGGGGATGTCAATATCACTGTACTTGAACAATTAGTAACCAGATGCAGCAACCTCAAGACTCTCAAGCTCAACAATGCTATACCTCTTGACAAGCTTGCTAACCTCCTTCGCAAGGCTCCTCAGATTGTAGAACTCGGAACAGGAAGATTCTCTGCAGATTACCATCCGGATCTCTTTTCGAAGCTTGAAGCAGCATTTGCTGGCTGTAAAAGCTTAAGAAGGCTCTCTGGGGCTTGGGATGCCGTTCCAGAATACCTGCCAGCATTTTATTGTGTATGCGAAGGCCTCACATCACTAAATCTGAGCTATGCTACTGTACGAGGCCCTGAACTGATTAAATTCATTAGCAGATGCAAAAATTTGCAACTCTTATGGGTGATGGACTTGATTGAAGACCATGGTCTTGCTGTTGTGGCATCGTCTTGTAACAAACTGCAGGAGTTGCGGGTTTTCCCTTCTGCTCCTTTCGAAGCAGCTGAGCAGGTCTCTTTGACTGAAAGAGGTCTTGTTGATGTATCTGCCAGTTGCCCAATGCTGGAGTCAGTCCTCTACTTTTGCAGACGGATGACCAACGAGGCCCTTATTACCATCGCGAAGAACCGGCCCAACTTCACTTGCTTCCGCCTATGCATCATTGAGCCTCACACACCAGATTACATTACACACCAGCCTCTTGATGCAGGTTTTAGTGCCATTGTGGAATCATGCAAGGGCCTCAGGCGGCTTTCTGTTTCAGGCCTTCTCACGGACAGTGTATTTAAATCCATCGGGGCACATGCTGACCGTCTTGAGATGCTCTCGATTGCCTTCGCCGGGAACAGTGATTTGGGCCTCCATTACATCCTATCGGGCTGCAAGAGCTTGAAGAAGCTAGAGATTAGGGACTGCCCATTTGGTGACAAGCCCTTGCTGGCAAACGCTGCCAAGCTGGAGACAATGCGATCCCTTTGGATGTCGACGTGCTCAATGACCTTGGGCGCATGCCGGCAGCTTGCGCGCAAGATGCCCCGTCTTAGTGTGGAGGTCATGAATGATCCTCGACGGGGATTCCCCTTGGACTCTCTAACAGATGAGAGCCCTGTTGAGACGTTGTATGTCTACCGGACAATTTCAGGTCCAAGGTCCGACACACCAGCTTGTGTCCAGATTCTCTAAGGGGCAGCTGTGGTCTACAAAGGTACTATGGAAGCATCCATTTTCAATCACATCATGTACCTTCAACACCTTACTAGCATAACCTGGATCGTCTCCTTGAAGTAGCAAGGCTGGTGACCTCGGTAATCCTGTCATAATCTCTGCTTAGCTGTACAACTGTTTCTGGGAGTTTAGGGTGAGAGACTCAGGGTCCCTTTCAGGTGTTAATAACTGTAGGGAGGACACTCGATGAGTTACAGGAACTACTAGATAGCGTCTTGAGGAAACTTGGGTTTGTTTTCTTAGCGTGCCTAGTTCTTTTCATGTATAAAAAAATATGGGATCATTCCAATGCTGCCACAATGTACTGTACTATTGGAACAATTGTACTTGGAGCCTCTACTTTTTTGAGTTTTGACCCCCTCCCC
CDS Sequence
- >Zm00001eb354200_T001
ATGGGCCGCGGCGGCGCGCGCGCGGCCCCCGCCGCCGCGGTGCCGCCCTGGCACGCGCTCCCGGACGAGGTCTGGGAGCACGCCTTCTCCTTCCTCCCCGCGGACTCGGACCGGGGCGCCGCCGCGTGCGCCTGCCACGCCTGGCTCCGCTTCGAGCGCCGCTCGCGCCGCCGCCTTGCCGTCGCCAACTGCTACGCCGCGTCCCCGCGCGACGCCGTCGAGCGCTTCCCCGCCGTCCGCGCCGTCGAGGTCAAGGGCAAGCCCCACTTCGCCGACTTCGGCCTCGTTCCGCCCGCCTGGGGCGCCGACGCCGCGCCCTGGGTCGCCGCCGCCGCCGCCGGCTGGCCGCTGCTCGAGGAGATTAGCTTTAAGCGCATGGTCGTCACCGACGACTGCCTCGAGATGATCGCGGCCTCCTTCAGGAACTTCCAGGTGCTGCGCCTCGTCTCCTGCGAGGGCTTCAGTACAGCCGGCCTCGCTGCCATTGCCGCTGCTTGCAGAAATCTAAGAGAACTTGACCTTCAGGAGAATGAGATTGAGGATTGCTCTATTCATTGGCTCAGTCTATTTCCAGTATCTTTCACTTCTTTGGTAACTCTAAATTTTTCATGCCTAGAGGGGGATGTCAATATCACTGTACTTGAACAATTAGTAACCAGATGCAGCAACCTCAAGACTCTCAAGCTCAACAATGCTATACCTCTTGACAAGCTTGCTAACCTCCTTCGCAAGGCTCCTCAGATTGTAGAACTCGGAACAGGAAGATTCTCTGCAGATTACCATCCGGATCTCTTTTCGAAGCTTGAAGCAGCATTTGCTGGCTGTAAAAGCTTAAGAAGGCTCTCTGGGGCTTGGGATGCCGTTCCAGAATACCTGCCAGCATTTTATTGTGTATGCGAAGGCCTCACATCACTAAATCTGAGCTATGCTACTGTACGAGGCCCTGAACTGATTAAATTCATTAGCAGATGCAAAAATTTGCAACTCTTATGGGTGATGGACTTGATTGAAGACCATGGTCTTGCTGTTGTGGCATCGTCTTGTAACAAACTGCAGGAGTTGCGGGTTTTCCCTTCTGCTCCTTTCGAAGCAGCTGAGCAGGTCTCTTTGACTGAAAGAGGTCTTGTTGATGTATCTGCCAGTTGCCCAATGCTGGAGTCAGTCCTCTACTTTTGCAGACGGATGACCAACGAGGCCCTTATTACCATCGCGAAGAACCGGCCCAACTTCACTTGCTTCCGCCTATGCATCATTGAGCCTCACACACCAGATTACATTACACACCAGCCTCTTGATGCAGGTTTTAGTGCCATTGTGGAATCATGCAAGGGCCTCAGGCGGCTTTCTGTTTCAGGCCTTCTCACGGACAGTGTATTTAAATCCATCGGGGCACATGCTGACCGTCTTGAGATGCTCTCGATTGCCTTCGCCGGGAACAGTGATTTGGGCCTCCATTACATCCTATCGGGCTGCAAGAGCTTGAAGAAGCTAGAGATTAGGGACTGCCCATTTGGTGACAAGCCCTTGCTGGCAAACGCTGCCAAGCTGGAGACAATGCGATCCCTTTGGATGTCGACGTGCTCAATGACCTTGGGCGCATGCCGGCAGCTTGCGCGCAAGATGCCCCGTCTTAGTGTGGAGGTCATGAATGATCCTCGACGGGGATTCCCCTTGGACTCTCTAACAGATGAGAGCCCTGTTGAGACGTTGTATGTCTACCGGACAATTTCAGGTCCAAGGTCCGACACACCAGCTTGTGTCCAGATTCTCTAA
Protein Sequence
- >Zm00001eb354200_P001
MGRGGARAAPAAAVPPWHALPDEVWEHAFSFLPADSDRGAAACACHAWLRFERRSRRRLAVANCYAASPRDAVERFPAVRAVEVKGKPHFADFGLVPPAWGADAAPWVAAAAAGWPLLEEISFKRMVVTDDCLEMIAASFRNFQVLRLVSCEGFSTAGLAAIAAACRNLRELDLQENEIEDCSIHWLSLFPVSFTSLVTLNFSCLEGDVNITVLEQLVTRCSNLKTLKLNNAIPLDKLANLLRKAPQIVELGTGRFSADYHPDLFSKLEAAFAGCKSLRRLSGAWDAVPEYLPAFYCVCEGLTSLNLSYATVRGPELIKFISRCKNLQLLWVMDLIEDHGLAVVASSCNKLQELRVFPSAPFEAAEQVSLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCIIEPHTPDYITHQPLDAGFSAIVESCKGLRRLSVSGLLTDSVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSTCSMTLGACRQLARKMPRLSVEVMNDPRRGFPLDSLTDESPVETLYVYRTISGPRSDTPACVQIL