Gene Details:

Functional Descriptions:

  • A transposon-directed epigenetic change in ZmCCT|ZmCCT3 underlies quantitative resistance to Gibberella stalk rot in maize.
  • A CCT domain-containing gene, ZmCCT|ZmCCT3, is the causal gene at the qRfg1 locus and a polymorphic CACTA-like transposable element (TE1) c. 2.4 kb upstream of ZmCCT|ZmCCT3 is the genetic determinant of allelic variation.
  • TE1 insertion in ZmCCT|ZmCCT3 caused selective depletion of H3K4me3 and enrichment of methylated GC to suppress the pathogen-induced ZmCCT|ZmCCT3 expression, resulting in disease susceptibility.
  • ZmCCT|ZmCCT3-mediated resistance to Gibberella stalk rot is not affected by photoperiod sensitivity.
  • This chromatin-based regulatory mechanism enables ZmCCT|ZmCCT3 to be more precise and timely in defense against F. graminearum infection.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Zm00001eb368200_T001
    AGATTGCAGAAGAATACACGGCAAGCCTCCCCTCCCCTCCAATATATGCGCATGCGCATCCCTCCGCCCTCTCAAACTCCCCTCAAAGCCCAAACCGCAGTTGGCGCAAAGTCCCAAGGCTTTTCCCACGTCCAAAGGGCAAAGGCCATGTTCCGTCGATCCTCCCCCTCCCCCTCCTACAGCGACGCTCTCATGCACAACCACGCCGCGAGCTTCTCCGCGCCGCTGCCCGTCACCGTCCCGCCCCCTCGCGGCGCCGCGGCCGGCGGGTACCTCGACGGTAATGTCGGCGCCTTCTCGTCGCCTCCGTCGTCGTACTACAACTACAACAACATCCAGAGGAGCGTCAGCTCGCACTCGCTCCCGATGCGCCTTCAGCCGGGCGACGTGTCCCTCGGCGGCCGTGGCTTGTACTCGCCGTCTTCGCCGTCCGCGCACCAGCTGACGCCGACGCTGCCGCCGCTCTCGTCTTCCCCGTCCTCCTCCTCCGGCGAACTCTTCGAGTTCACCTCGCCGTGCCCCGTCCGCCGCGTATTCAGCACCGGCGATCTCCAGGGGATGAACGGGTCGTCGCCGCCGCGCCCGGTGCTGTCGGCCGACGCCTGCGGCCACGAGGGTGGCGGGACGTTCTCTCAGAAGGTCGTCCGGTACAGCGCCGTGGAGAGGAAAGAGCGGATCGAGCGCTACCGTGTGAAACGGCACCAGAGAAACTTCAACAAGAAGATCACTTACGCCTGCAGAAAGACGCTGGCGGACAGCCGCCCGCGGGTGAAGGGCCGCTTCGCGAGGAACGGCGAGGCCGAAGCCGATGCCGACGACCGCGAGACGTCCGATAACAGCTACGAGTACGGCCGCAGCCACAACGAGCTCGGCAACGGCAGCGCCTACAGCACCACGGGGAGCTGCTACGATGGCGACAACGGCGAGTGGTGGTGGCGGGCGCCCGGTGCCTCCGCCGCGGGGGACGACGATGCTCAGCGGCAGGTCCGCTTCGACGACGACGACGACGAGCTCTGGGCGACCCTCGGCGACATGATGTCGATGCACCTGGTCTCGTAGTAGGCTGCGATCGCCTGCACGCTTTAGGCTACAGGCCAGTCACCGGTCACCAGCCGAGTAGCGCGGCAGGGCCCAGGGGCGATGGGACGAACGCGACGCGACGTGGCGTTGGTGTCCGGTGCACGCGCGAGCACTCCACTCGATCGGCGGGGGATGTTTTGCGCCCTAGCTCTACAAGTCGTCGTAGTTTCCGTCGTTGTGCGTGTCTGCTGGCGCTGCACTTATTTTTAAGACTTGGAAAATGGCGCGTATCACATGATCCGTCAGTGACAGGACATGACATGTCATGTCACGGCAGTTTGCTCACCCGTGGGGGCTGCGACTTCTCCCGGTGTCGCGGGAGATGGATGGCATTGGCAGGCAGGTGGCACTGCGACTGCGATTGCGATGCAATCCAGTCAAAGCCTCAAAGGGGCCGGGCGGGCGGGGCCGGGGGTGGACATCACTGTCGCGGCGTCGCGAACGCGGGCGAGGCGTCCGTGATGCGCAACCAACCATCCCGCTCCCGCCGGGCTTTTGGAGGGGGTTCAGCTTCTTCAAGTCACTTCAATGGCCGTCTCGGGGATGTTCCACCACACGTGATCGGCAGCTAACTCCAGTTTAGTCGCCGCGGCCCGGGATTGCGAATTGTCAGCAGCTGTTCGGTTTTGCGTCGTGTCACTTGTCAGCATCTGCATATGTTTTGGATTGGTTCAGTAAGTTGCGCATTAACGTTGTGCCATACAACTTGCATGCTTGAGCATGGCACCCCCAGATTCTGGCATTTTTTATTATTAATTCCTATGTCCCTATA
CDS Sequence
  • >Zm00001eb368200_T001
    ATGTTCCGTCGATCCTCCCCCTCCCCCTCCTACAGCGACGCTCTCATGCACAACCACGCCGCGAGCTTCTCCGCGCCGCTGCCCGTCACCGTCCCGCCCCCTCGCGGCGCCGCGGCCGGCGGGTACCTCGACGGTAATGTCGGCGCCTTCTCGTCGCCTCCGTCGTCGTACTACAACTACAACAACATCCAGAGGAGCGTCAGCTCGCACTCGCTCCCGATGCGCCTTCAGCCGGGCGACGTGTCCCTCGGCGGCCGTGGCTTGTACTCGCCGTCTTCGCCGTCCGCGCACCAGCTGACGCCGACGCTGCCGCCGCTCTCGTCTTCCCCGTCCTCCTCCTCCGGCGAACTCTTCGAGTTCACCTCGCCGTGCCCCGTCCGCCGCGTATTCAGCACCGGCGATCTCCAGGGGATGAACGGGTCGTCGCCGCCGCGCCCGGTGCTGTCGGCCGACGCCTGCGGCCACGAGGGTGGCGGGACGTTCTCTCAGAAGGTCGTCCGGTACAGCGCCGTGGAGAGGAAAGAGCGGATCGAGCGCTACCGTGTGAAACGGCACCAGAGAAACTTCAACAAGAAGATCACTTACGCCTGCAGAAAGACGCTGGCGGACAGCCGCCCGCGGGTGAAGGGCCGCTTCGCGAGGAACGGCGAGGCCGAAGCCGATGCCGACGACCGCGAGACGTCCGATAACAGCTACGAGTACGGCCGCAGCCACAACGAGCTCGGCAACGGCAGCGCCTACAGCACCACGGGGAGCTGCTACGATGGCGACAACGGCGAGTGGTGGTGGCGGGCGCCCGGTGCCTCCGCCGCGGGGGACGACGATGCTCAGCGGCAGGTCCGCTTCGACGACGACGACGACGAGCTCTGGGCGACCCTCGGCGACATGATGTCGATGCACCTGGTCTCGTAG
Protein Sequence
  • >Zm00001eb368200_P001
    MFRRSSPSPSYSDALMHNHAASFSAPLPVTVPPPRGAAAGGYLDGNVGAFSSPPSSYYNYNNIQRSVSSHSLPMRLQPGDVSLGGRGLYSPSSPSAHQLTPTLPPLSSSPSSSSGELFEFTSPCPVRRVFSTGDLQGMNGSSPPRPVLSADACGHEGGGTFSQKVVRYSAVERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARNGEAEADADDRETSDNSYEYGRSHNELGNGSAYSTTGSCYDGDNGEWWWRAPGASAAGDDDAQRQVRFDDDDDELWATLGDMMSMHLVS

Source: Genetic information comes from the article