Gene Details:
- Gene ID: Zm00001eb368200
- Gene Symbol: ZmCCT|ZmCCT3
- Gene Name: CO CO-LIKE TIMING OF CAB1 protein domain3
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- A transposon-directed epigenetic change in ZmCCT|ZmCCT3 underlies quantitative resistance to Gibberella stalk rot in maize.
- A CCT domain-containing gene, ZmCCT|ZmCCT3, is the causal gene at the qRfg1 locus and a polymorphic CACTA-like transposable element (TE1) c. 2.4 kb upstream of ZmCCT|ZmCCT3 is the genetic determinant of allelic variation.
- TE1 insertion in ZmCCT|ZmCCT3 caused selective depletion of H3K4me3 and enrichment of methylated GC to suppress the pathogen-induced ZmCCT|ZmCCT3 expression, resulting in disease susceptibility.
- ZmCCT|ZmCCT3-mediated resistance to Gibberella stalk rot is not affected by photoperiod sensitivity.
- This chromatin-based regulatory mechanism enables ZmCCT|ZmCCT3 to be more precise and timely in defense against F. graminearum infection.
Function-related keywords:
Literature:
- A transposon-directed epigenetic change in ZmCCT underlies quantitative resistance to Gibberella stalk rot in maize. DOI: 10.1111/nph.14688 ; PMID: 28722229
Related News:
Gene Resources:
- NCBI ID: LOC100281853
- UniProt accessions: U3PGH4
Orthologs:
Sequences:
cDNA Sequence
- >Zm00001eb368200_T001
AGATTGCAGAAGAATACACGGCAAGCCTCCCCTCCCCTCCAATATATGCGCATGCGCATCCCTCCGCCCTCTCAAACTCCCCTCAAAGCCCAAACCGCAGTTGGCGCAAAGTCCCAAGGCTTTTCCCACGTCCAAAGGGCAAAGGCCATGTTCCGTCGATCCTCCCCCTCCCCCTCCTACAGCGACGCTCTCATGCACAACCACGCCGCGAGCTTCTCCGCGCCGCTGCCCGTCACCGTCCCGCCCCCTCGCGGCGCCGCGGCCGGCGGGTACCTCGACGGTAATGTCGGCGCCTTCTCGTCGCCTCCGTCGTCGTACTACAACTACAACAACATCCAGAGGAGCGTCAGCTCGCACTCGCTCCCGATGCGCCTTCAGCCGGGCGACGTGTCCCTCGGCGGCCGTGGCTTGTACTCGCCGTCTTCGCCGTCCGCGCACCAGCTGACGCCGACGCTGCCGCCGCTCTCGTCTTCCCCGTCCTCCTCCTCCGGCGAACTCTTCGAGTTCACCTCGCCGTGCCCCGTCCGCCGCGTATTCAGCACCGGCGATCTCCAGGGGATGAACGGGTCGTCGCCGCCGCGCCCGGTGCTGTCGGCCGACGCCTGCGGCCACGAGGGTGGCGGGACGTTCTCTCAGAAGGTCGTCCGGTACAGCGCCGTGGAGAGGAAAGAGCGGATCGAGCGCTACCGTGTGAAACGGCACCAGAGAAACTTCAACAAGAAGATCACTTACGCCTGCAGAAAGACGCTGGCGGACAGCCGCCCGCGGGTGAAGGGCCGCTTCGCGAGGAACGGCGAGGCCGAAGCCGATGCCGACGACCGCGAGACGTCCGATAACAGCTACGAGTACGGCCGCAGCCACAACGAGCTCGGCAACGGCAGCGCCTACAGCACCACGGGGAGCTGCTACGATGGCGACAACGGCGAGTGGTGGTGGCGGGCGCCCGGTGCCTCCGCCGCGGGGGACGACGATGCTCAGCGGCAGGTCCGCTTCGACGACGACGACGACGAGCTCTGGGCGACCCTCGGCGACATGATGTCGATGCACCTGGTCTCGTAGTAGGCTGCGATCGCCTGCACGCTTTAGGCTACAGGCCAGTCACCGGTCACCAGCCGAGTAGCGCGGCAGGGCCCAGGGGCGATGGGACGAACGCGACGCGACGTGGCGTTGGTGTCCGGTGCACGCGCGAGCACTCCACTCGATCGGCGGGGGATGTTTTGCGCCCTAGCTCTACAAGTCGTCGTAGTTTCCGTCGTTGTGCGTGTCTGCTGGCGCTGCACTTATTTTTAAGACTTGGAAAATGGCGCGTATCACATGATCCGTCAGTGACAGGACATGACATGTCATGTCACGGCAGTTTGCTCACCCGTGGGGGCTGCGACTTCTCCCGGTGTCGCGGGAGATGGATGGCATTGGCAGGCAGGTGGCACTGCGACTGCGATTGCGATGCAATCCAGTCAAAGCCTCAAAGGGGCCGGGCGGGCGGGGCCGGGGGTGGACATCACTGTCGCGGCGTCGCGAACGCGGGCGAGGCGTCCGTGATGCGCAACCAACCATCCCGCTCCCGCCGGGCTTTTGGAGGGGGTTCAGCTTCTTCAAGTCACTTCAATGGCCGTCTCGGGGATGTTCCACCACACGTGATCGGCAGCTAACTCCAGTTTAGTCGCCGCGGCCCGGGATTGCGAATTGTCAGCAGCTGTTCGGTTTTGCGTCGTGTCACTTGTCAGCATCTGCATATGTTTTGGATTGGTTCAGTAAGTTGCGCATTAACGTTGTGCCATACAACTTGCATGCTTGAGCATGGCACCCCCAGATTCTGGCATTTTTTATTATTAATTCCTATGTCCCTATA
CDS Sequence
- >Zm00001eb368200_T001
ATGTTCCGTCGATCCTCCCCCTCCCCCTCCTACAGCGACGCTCTCATGCACAACCACGCCGCGAGCTTCTCCGCGCCGCTGCCCGTCACCGTCCCGCCCCCTCGCGGCGCCGCGGCCGGCGGGTACCTCGACGGTAATGTCGGCGCCTTCTCGTCGCCTCCGTCGTCGTACTACAACTACAACAACATCCAGAGGAGCGTCAGCTCGCACTCGCTCCCGATGCGCCTTCAGCCGGGCGACGTGTCCCTCGGCGGCCGTGGCTTGTACTCGCCGTCTTCGCCGTCCGCGCACCAGCTGACGCCGACGCTGCCGCCGCTCTCGTCTTCCCCGTCCTCCTCCTCCGGCGAACTCTTCGAGTTCACCTCGCCGTGCCCCGTCCGCCGCGTATTCAGCACCGGCGATCTCCAGGGGATGAACGGGTCGTCGCCGCCGCGCCCGGTGCTGTCGGCCGACGCCTGCGGCCACGAGGGTGGCGGGACGTTCTCTCAGAAGGTCGTCCGGTACAGCGCCGTGGAGAGGAAAGAGCGGATCGAGCGCTACCGTGTGAAACGGCACCAGAGAAACTTCAACAAGAAGATCACTTACGCCTGCAGAAAGACGCTGGCGGACAGCCGCCCGCGGGTGAAGGGCCGCTTCGCGAGGAACGGCGAGGCCGAAGCCGATGCCGACGACCGCGAGACGTCCGATAACAGCTACGAGTACGGCCGCAGCCACAACGAGCTCGGCAACGGCAGCGCCTACAGCACCACGGGGAGCTGCTACGATGGCGACAACGGCGAGTGGTGGTGGCGGGCGCCCGGTGCCTCCGCCGCGGGGGACGACGATGCTCAGCGGCAGGTCCGCTTCGACGACGACGACGACGAGCTCTGGGCGACCCTCGGCGACATGATGTCGATGCACCTGGTCTCGTAG
Protein Sequence
- >Zm00001eb368200_P001
MFRRSSPSPSYSDALMHNHAASFSAPLPVTVPPPRGAAAGGYLDGNVGAFSSPPSSYYNYNNIQRSVSSHSLPMRLQPGDVSLGGRGLYSPSSPSAHQLTPTLPPLSSSPSSSSGELFEFTSPCPVRRVFSTGDLQGMNGSSPPRPVLSADACGHEGGGTFSQKVVRYSAVERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARNGEAEADADDRETSDNSYEYGRSHNELGNGSAYSTTGSCYDGDNGEWWWRAPGASAAGDDDAQRQVRFDDDDDELWATLGDMMSMHLVS
Source: Genetic information comes from the article