Information report for bCCP1
Gene Details
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Functional Descriptions
- Loss-of-function of bZIP and coiled-coil domain-containing PPR 1 (bCCP1|ppr365) or PCW1 arrests seed development in maize.
- bCCP1|ppr365 encodes a bZIP and coiled-coil domain-containing PPR protein, and PCW1 encodes an atypical PPR–DYW protein. bCCP1|ppr365 is required for editing at 66 sites in mitochondria and PCW1 is required for editing at 102 sites, including the 66 sites that require bCCP1|ppr365.
- The PCW1-mediated editing sites are exclusively associated with PPR-E proteins. bCCP1|ppr365 interacts with PCW1 and the PPR-E protein Empty pericarp7 (EMP7).
- These results suggest that PPR-E proteins function in RNA editing by recruiting the trans deaminase PCW1 and bCCP1|ppr365, and MORF1/8 assist this recruitment through protein–protein interactions.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100279827
- UniProt accessions: A0A1D6MA56 B8A076
- EMBL: BT054968
- AlphaFoldDB: B8A076
- KEGG: zma:100279827
- InterPro: IPR002885 , IPR011990 , IPR052308
- PANTHER: PTHR47937 , PTHR47937:SF5
- SUPFAM: SSF48452
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: B8A076
Sequences
cDNA Sequence
- >Zm00001eb293160_T001
CTTGCGAGTACGTTTTTCTTCAGCCAAGGCGAAACACAGAGTAACATATCTCCTGTTCTCAATGCTCCAACCCGGAAGGCCGATCCCCGCCCCAAACCCCAAACCCTCGTCGCCGCCCGGTGGCCGTCGCCCAAGCGCACCCGCGGAAGATGTCGCTGTCGAAGCCGGTCTCGGCACGCCGCCTCGTGCCGGCGCTCTTCCCGCTCGCGCACGCGGACGCCGCCTCGGCCACGGCTTCCCGCCGCGAGCGCCGTAAGGACACGTTCGTCGCGACGCCCCCGATCCCCGCGCCTTCCCCGCGGGCAGTGCGCCTCGCGGAGCCGCTCCCCACGCTGGCGCCGTCACGCCTCGCGTTCCACAACCGGATCCTCGCGCTCCTCTCGGGGCCCCAGGCCGACCTCCCCGAGGCGGCGCTCCTCACCCGCCACGCGCTCCACTCCAACTGCCGCCCCTCATCCTTCACCTGCGCCGCCGTCCTCGCCGCGCTCCTCCGCACGCGCCGCCTCGAAGACTTCTTCGCGCTGCACCGCTTCGCGCTCCAAGCCGCCGTCCCGCCCACCGCCGCCACGCACGTGCTCTACCTATCCGCGCTCGCCGCGCGCCGCCTCGCCGACGACGCGCTCCACCACCTCCGCATCATCGCCCGCCCCGGCTCCCCCGTGCCGCCCTCCCCGACGGCCTACCGCGTCGTCGTCGAGTGCCTCGTTGCAGACCACGGCCGGCTCGCGGATGCCGTCAAGCTCAAGGATGAGATGCTCACCTCTGGATTCGTCGGGCCGGATCCCAAGGTCTACAGCCTTCTCATGGCTGGGTTCGTGGGTGCTGGGGATGGAGCCAAAGCCTTGGAGCTGTACCAAGAACTCAAGGACAAGGTTGGGGGCGAACCAATTCTGGATGGCATTGTGTACGGGACTCTCATGAAGGCGTACTTCCTTATGGGAACGGGGGAAAAGGTTATGGAGTGTTACAAAGAGGTGCTGTGTGTTGAATCTGCGGTGAGGTTTGGGGCCGAGAGCTACAATGAGGTGGTTGATGCGCTTGGGCAGAATGGGAGGTTGGAGGATGCACTTAAGCTGTTCGACAGAATGCTTGAGGAACATGACCCGCCACTGCGGATTGCAGTTGATCTGAGAAGCTTCAGGGTGATGGTTGATACCTATTGTGCTGCTGGGAGATTTGAAGATGCAGTTGCAGTGTTCAGAAGAATGGGGGAATGGAAGCTGGTGCCTGATGTGGCATCCTATAATAATTTGATTCGGCACCTGCAGATTAACCAGCTGATAGATAAGGCGGAGGTGCTCTACAATGAGATGTGTGAGAGTGGTGTTGGTGCGGATAAGGAGACATATTTACTGCTCACGGAAGCATGCTTCAGTGTTGATCGCATCGATGATGGTATCTCTTACTTTGACAAAATGGACGAATTGGAGCTGAAGCCTGATGCAACTGCATATCATAAACTTATTGATGGCCTGGTGGGTTTCAGTATGGTCGACAAGGCTCAGGAATACTTCAATCAGATGAAGGAGAAGGGAGTTAACCCAAGCATCTCAAGCTACGAGACATTGCTGAAGGCATATATTGCTGCTGACCGGTTGGATGATGCAGTCAATGTTGCAAAAGGTATTCTTTTGAATGAGAAGGTTCTGTTCAGCTATGGAATGAGGGAGCTTTTAGAAGGAGCATTACGTGGAGATGGGAGGGGAAATGACATCGCCAAGTTATATGAGGATGTGGAGAGGGAAAAGGCTGAAGCGGAAGCCCGGGCTGCAGAAGAGAAGGCGAGGGCAGAGGCTCTTGCCAGAGAAGAGAGGGAGAGGAGGAGAGCAGAGATTGCTGCTAAGGATGAAGCCGCAGCTAAAGCCAGTGCCGCTGCCATTGAAGCTATCCTAGCCCATAAAAGGAAGACAGAGAATGAAGGAGGAGCGCCTGCTCCTGATGCAAACACCCTGGATGGTGGCTTTCTCAGTAAGCTAGGCCTTAAAACAGCCGGAGAAGGGGCACTTCAAGACAATCCAACAGAAAGTGGAGACGATGGAGAAGGGGCACTTCATGGCAATCCAACAGAAAGTGGAGACGATGGAGAGGGGGCACTTCAAGGCAATCCAACGGAAAGAAATGGAGGCAATGTGCAGCAGGGATATCTGTGATGACCACAAAAAATTATGTCCACAATTTGCTCATCACATTCAAGTCATAAGCTACCGTTTGTCAGTTTATATATCAATATAATGAGCACGATTAGTGATTTCCGCAATGCCAAAAATTAGCTTGCTTCTGGCTCAGCATTGTGTTACTGCAGTGGATGCATACAAACATAATTTTGATGTGTAACCATTGGAAACCATTTTCCATTTGTTCAGGTTCAGTATCAAAACAACTGTCTGTTTGCTACCAGTAGCGTGTAAATGATACGAATTGTTGTTGCAAAATCATTGCAAGCTACCGAAGAAAGCAGAACGTGGGGTCCAGCCATTCTTTTGCTGTGTGAACAGTTTAACACGAAAATCAACCTCATCATATTTTATTGTGTAAAATTGTAGACCTTGCATAGTATCCATGCAATCCATTCATATATCGATGAAAAAC
CDS Sequence
- >Zm00001eb293160_T001
ATGTCGCTGTCGAAGCCGGTCTCGGCACGCCGCCTCGTGCCGGCGCTCTTCCCGCTCGCGCACGCGGACGCCGCCTCGGCCACGGCTTCCCGCCGCGAGCGCCGTAAGGACACGTTCGTCGCGACGCCCCCGATCCCCGCGCCTTCCCCGCGGGCAGTGCGCCTCGCGGAGCCGCTCCCCACGCTGGCGCCGTCACGCCTCGCGTTCCACAACCGGATCCTCGCGCTCCTCTCGGGGCCCCAGGCCGACCTCCCCGAGGCGGCGCTCCTCACCCGCCACGCGCTCCACTCCAACTGCCGCCCCTCATCCTTCACCTGCGCCGCCGTCCTCGCCGCGCTCCTCCGCACGCGCCGCCTCGAAGACTTCTTCGCGCTGCACCGCTTCGCGCTCCAAGCCGCCGTCCCGCCCACCGCCGCCACGCACGTGCTCTACCTATCCGCGCTCGCCGCGCGCCGCCTCGCCGACGACGCGCTCCACCACCTCCGCATCATCGCCCGCCCCGGCTCCCCCGTGCCGCCCTCCCCGACGGCCTACCGCGTCGTCGTCGAGTGCCTCGTTGCAGACCACGGCCGGCTCGCGGATGCCGTCAAGCTCAAGGATGAGATGCTCACCTCTGGATTCGTCGGGCCGGATCCCAAGGTCTACAGCCTTCTCATGGCTGGGTTCGTGGGTGCTGGGGATGGAGCCAAAGCCTTGGAGCTGTACCAAGAACTCAAGGACAAGGTTGGGGGCGAACCAATTCTGGATGGCATTGTGTACGGGACTCTCATGAAGGCGTACTTCCTTATGGGAACGGGGGAAAAGGTTATGGAGTGTTACAAAGAGGTGCTGTGTGTTGAATCTGCGGTGAGGTTTGGGGCCGAGAGCTACAATGAGGTGGTTGATGCGCTTGGGCAGAATGGGAGGTTGGAGGATGCACTTAAGCTGTTCGACAGAATGCTTGAGGAACATGACCCGCCACTGCGGATTGCAGTTGATCTGAGAAGCTTCAGGGTGATGGTTGATACCTATTGTGCTGCTGGGAGATTTGAAGATGCAGTTGCAGTGTTCAGAAGAATGGGGGAATGGAAGCTGGTGCCTGATGTGGCATCCTATAATAATTTGATTCGGCACCTGCAGATTAACCAGCTGATAGATAAGGCGGAGGTGCTCTACAATGAGATGTGTGAGAGTGGTGTTGGTGCGGATAAGGAGACATATTTACTGCTCACGGAAGCATGCTTCAGTGTTGATCGCATCGATGATGGTATCTCTTACTTTGACAAAATGGACGAATTGGAGCTGAAGCCTGATGCAACTGCATATCATAAACTTATTGATGGCCTGGTGGGTTTCAGTATGGTCGACAAGGCTCAGGAATACTTCAATCAGATGAAGGAGAAGGGAGTTAACCCAAGCATCTCAAGCTACGAGACATTGCTGAAGGCATATATTGCTGCTGACCGGTTGGATGATGCAGTCAATGTTGCAAAAGGTATTCTTTTGAATGAGAAGGTTCTGTTCAGCTATGGAATGAGGGAGCTTTTAGAAGGAGCATTACGTGGAGATGGGAGGGGAAATGACATCGCCAAGTTATATGAGGATGTGGAGAGGGAAAAGGCTGAAGCGGAAGCCCGGGCTGCAGAAGAGAAGGCGAGGGCAGAGGCTCTTGCCAGAGAAGAGAGGGAGAGGAGGAGAGCAGAGATTGCTGCTAAGGATGAAGCCGCAGCTAAAGCCAGTGCCGCTGCCATTGAAGCTATCCTAGCCCATAAAAGGAAGACAGAGAATGAAGGAGGAGCGCCTGCTCCTGATGCAAACACCCTGGATGGTGGCTTTCTCAGTAAGCTAGGCCTTAAAACAGCCGGAGAAGGGGCACTTCAAGACAATCCAACAGAAAGTGGAGACGATGGAGAAGGGGCACTTCATGGCAATCCAACAGAAAGTGGAGACGATGGAGAGGGGGCACTTCAAGGCAATCCAACGGAAAGAAATGGAGGCAATGTGCAGCAGGGATATCTGTGA
Protein Sequence
- >Zm00001eb293160_P001
MSLSKPVSARRLVPALFPLAHADAASATASRRERRKDTFVATPPIPAPSPRAVRLAEPLPTLAPSRLAFHNRILALLSGPQADLPEAALLTRHALHSNCRPSSFTCAAVLAALLRTRRLEDFFALHRFALQAAVPPTAATHVLYLSALAARRLADDALHHLRIIARPGSPVPPSPTAYRVVVECLVADHGRLADAVKLKDEMLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAYFLMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPLRIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKAEVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDGLVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLFSYGMRELLEGALRGDGRGNDIAKLYEDVEREKAEAEARAAEEKARAEALAREERERRRAEIAAKDEAAAKASAAAIEAILAHKRKTENEGGAPAPDANTLDGGFLSKLGLKTAGEGALQDNPTESGDDGEGALHGNPTESGDDGEGALQGNPTERNGGNVQQGYL