Gene Details:
- Gene ID: Zm00001eb216130
- Gene Symbol: ZmPHD11
- Gene Name: PHD-transcription factor 11
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- 12 genes in eight types, including ZmbHLH51, ZmbHLH122, ZmTGA9-1/-2/-3, ZmTGA10, ZmMYB84, ZmMYB33-1/-2, ZmPHD11 and ZmLBD10/27, were identified as maize new GMS genes by using DNA sequencing, phenotypic and cytological analyses.
- ZmPHD11 is the maize ortholog of the reported GMS genes OsTIP3 and AtMMD1 encoding PHD finger TFs.
- ZmPHD11 is required for maize male fertility via controlling the formation of anther cuticle and Ubisch bodies.
- The results showed that null mutations of eight-type TF genes, including ZmbHLH51, ZmbHLH122, ZmTGA9-1/-2/-3, ZmTGA10, ZmMYB84, ZmMYB33-1/-2, ZmPHD11 and ZmLBD10/27, resulted in male sterility with different kinds of anther and pollen defects.
Function-related keywords:
- fertility , pollen , anther , sterility , cuticle , male-sterility , male-fertility , pollen-fertility , pollen-formation , cuticle-formation
Literature:
- CRISPR/Cas9-based discovery of maize transcription factors regulating male sterility and their functional conservation in plants. DOI: 10.1111/pbi.13590 ; PMID: 33772993
Related News:
Gene Resources:
- NCBI ID: LOC100384509
- UniProt accessions: A0A1D6GJ36
Orthologs:
Sequences:
cDNA Sequence
- >Zm00001eb216130_T001
ACCTTCACTCGCAAGCCACAAATTACGGGAAAGCCCCTGCCGCCGCGAACCGAAACGCAAAACCCCAGCGCCCTTAGCAGGAGACGACGCTCTTGGCAATGCCGTCCAGGCGCGCGCTACGGCGGTCTCCGCCGCCACGACAGAGCCCGCAGGCAGCGGCGGACGCGAAGGAGGCGGCGAGCCCGTGGCTACCGTCCTCATCCTCCACCTCGTCGTCTTCCTCCTCAGCCTCCGCGCTCGTCAGGCGCTCCGCCGCCTTCTCGGCGGCTGGGCCGAGGGGCGGATCGGGGACGCGCGTGTACCCGTTGCGGGACTTCCCGGGCGGGGACGCGGCCGCGCTCGGCGGTGCGTTCCGGGACAACGTGCGGTGGCTCCTGAAGCAGTGGAGCTGCGTTCCGGGTTCCGTGTCGGCGTGGCGCGCGCTGCTGTCAGACGAGCGGACGGGCGCCTTAGTCCCCGTCATCGCCGTGGAGGAGCTCGCGGCATCGTCGCCCTTGCCGCTCTGCGATCTCTGTCGCTGCGCCGGTTGGAGCCACCACTGGGTGTCAAAGCGGAAGTACCATTTCATCATTCCGGCAGTGGTCGACTGGGACCAGCCATTCAGGGCTGATGGGTTACTTGGGCACAGCGAGCACCTCCTACATGGTCTGATCCATAGTAATGGCTTTGGTCACCTTCTCACCCTCCGTGGTCGTGTTGGTGGCTCCACTTTCCTCTCTGGCTGCCAGATCATGGATATATGGGATCAACTTTGCACAGCTCTCCGTGTAAGAGCCGTCTCTGTTGTGGACTTGACCCAGAAGTACTCTGTGGACCTCCGCCTCCTGCTTGGAGTGGCACAAAGCAAGACTTGGTTCACTCGCTGGGGGTACTGCCTTGCCAAGGGTTGTTTCAGCGTGTCTAGGTCCACTTATACTGCTGCACTTGAAGCCCTTGCTGCCCTGCCTGTTGATTGTCTCCGTAGTCGTCATGTCCGTCGTGTGGTCACCATCTACCGCCGCCTCTCCAGCAAACCTCTGGTTACAGTCCGCGAGTTTCTCCTCTGCCTGCTTGATTGGAAGCACCGTGAGCCCCCGCTTTCTCCTCCTCCCGTGAAGGCATCCTCGCGGCTGATGTTCTTGCTGCCAAAGTCATGTATGATGAAGAGGCCCAGGCAGCCATGTCAACGCTTTGAGGACGTAGTTGACCTGCTTGAGTGTCGGTGGTCAAAGAAGCGTCTGCTTAGTGCTGCAAATGTTGTTGTTGCAAAGCTGCGAGAGCATGCGGATGGCACAAAGATAACACGGCAAGCAGTGCGAGATGCTGCAAGGGGTGGCATCGGTGACACTGGTCTCCTGGACTTCGTCATCAAGTCCCTCAATAACACTGTTGTTGGTAACCACATTGTGCGCCGCGTGCCTGACCCTGAGAATCGTGTGCTTCACTTCAGCCTTGAGGAATATGCTGAGCCTGAGCCACAGCCACAGGCAGATCATGAGCTTGAACCAGTGGAACTTGATGCAGAGAACACCCCTCCTGCAGTCCGATGGCCAAACGCAGCCGAGGCGGAGCGGGATCTGCGTGCTGTGTACCGAGCAATGGTGGGGGCACGCAGTGAAGCAGCACAGGCTGTACTGGACTGCAAGCACTGGGTGAAATGGTGGGGCCTCAGGGACGAGTCTGATGACCAGCTAAGGTTCCTTGTTGAGTGGCGACCACAGCCATGGGAGGCTACTGAACTTACAAGGCCAATGCCGCCTGGGGATATTGTGGTAGTACCACTGCATGCATCCATAGGCGAGCTGCTTGTTGAGGCAGAGCATGCACTGAGGGATACATACTGCTTCTTTGAGAATTTCCAGGCCGAGTCACTGGATGGCATTACTGGGGATAAATGGGATCCGGTGATGCTTGGTGGAGCAGAGTCTGGTGACACCATTGGTGTGCACGGCCACGGAGCTGACATGGAGACTGGGCTGCGGTGCCAGGGAGGTGCAGATGCGTGGGAGGTGCAGTGCGTTTGTGGTGCACAGGACGACGATGGGGAGCGCATGGTGGCATGCGATGCATGCAATGTCTGGCACCATACACGCTGTGTCGGCATTGCAGATGGTGCTCCGGTGCCACCATTGTTTCTCTGCATATCCTGCAGTGGCGCGCTAATGGCCGCTGGACCAATTTCTGGATGAGACACTAACGGTACCTGAAGTTAAGTGACAATTCTTTTGCACCTTTTTCAGTTCATGCCTGACAGGTAGGTGTCTGACTAGTAAACCAGATACTATTGAGACCTCGTGTGTAAAGTGCGTTGCTGTAGTAGTATGTGATGAGTTTAGTAACGATGGAGTAATACCGAATGCTATCTGTACTAAGTCGACTAGTCGTAGTAGAGTAGAGAGGATTAGGCAGTAGAAAGGGAAGCACTATCCTTGTCGTTAGCAATCCGACTGGAAATTTTGTACATGGACATATTACAGAATAGACGCGGTAAATAGCTGTCCTGTGATTTGCGCCTTTCTACCGTCTGTGAATCTTGGCAACGAAGTTTAACTTGTTCATTGTGTTATAAGAATTTATTTATTGTGAGACAAAACAAGAATCATTTGTTGCTGTTTGATCTTGCC
CDS Sequence
- >Zm00001eb216130_T001
ATGCCGTCCAGGCGCGCGCTACGGCGGTCTCCGCCGCCACGACAGAGCCCGCAGGCAGCGGCGGACGCGAAGGAGGCGGCGAGCCCGTGGCTACCGTCCTCATCCTCCACCTCGTCGTCTTCCTCCTCAGCCTCCGCGCTCGTCAGGCGCTCCGCCGCCTTCTCGGCGGCTGGGCCGAGGGGCGGATCGGGGACGCGCGTGTACCCGTTGCGGGACTTCCCGGGCGGGGACGCGGCCGCGCTCGGCGGTGCGTTCCGGGACAACGTGCGGTGGCTCCTGAAGCAGTGGAGCTGCGTTCCGGGTTCCGTGTCGGCGTGGCGCGCGCTGCTGTCAGACGAGCGGACGGGCGCCTTAGTCCCCGTCATCGCCGTGGAGGAGCTCGCGGCATCGTCGCCCTTGCCGCTCTGCGATCTCTGTCGCTGCGCCGGTTGGAGCCACCACTGGGTGTCAAAGCGGAAGTACCATTTCATCATTCCGGCAGTGGTCGACTGGGACCAGCCATTCAGGGCTGATGGGTTACTTGGGCACAGCGAGCACCTCCTACATGGTCTGATCCATAGTAATGGCTTTGGTCACCTTCTCACCCTCCGTGGTCGTGTTGGTGGCTCCACTTTCCTCTCTGGCTGCCAGATCATGGATATATGGGATCAACTTTGCACAGCTCTCCGTGTAAGAGCCGTCTCTGTTGTGGACTTGACCCAGAAGTACTCTGTGGACCTCCGCCTCCTGCTTGGAGTGGCACAAAGCAAGACTTGGTTCACTCGCTGGGGGTACTGCCTTGCCAAGGGTTGTTTCAGCGTGTCTAGGTCCACTTATACTGCTGCACTTGAAGCCCTTGCTGCCCTGCCTGTTGATTGTCTCCGTAGTCGTCATGTCCGTCGTGTGGTCACCATCTACCGCCGCCTCTCCAGCAAACCTCTGGTTACAGTCCGCGAGTTTCTCCTCTGCCTGCTTGATTGGAAGCACCGTGAGCCCCCGCTTTCTCCTCCTCCCGTGAAGGCATCCTCGCGGCTGATGTTCTTGCTGCCAAAGTCATGTATGATGAAGAGGCCCAGGCAGCCATGTCAACGCTTTGAGGACGTAGTTGACCTGCTTGAGTGTCGGTGGTCAAAGAAGCGTCTGCTTAGTGCTGCAAATGTTGTTGTTGCAAAGCTGCGAGAGCATGCGGATGGCACAAAGATAACACGGCAAGCAGTGCGAGATGCTGCAAGGGGTGGCATCGGTGACACTGGTCTCCTGGACTTCGTCATCAAGTCCCTCAATAACACTGTTGTTGGTAACCACATTGTGCGCCGCGTGCCTGACCCTGAGAATCGTGTGCTTCACTTCAGCCTTGAGGAATATGCTGAGCCTGAGCCACAGCCACAGGCAGATCATGAGCTTGAACCAGTGGAACTTGATGCAGAGAACACCCCTCCTGCAGTCCGATGGCCAAACGCAGCCGAGGCGGAGCGGGATCTGCGTGCTGTGTACCGAGCAATGGTGGGGGCACGCAGTGAAGCAGCACAGGCTGTACTGGACTGCAAGCACTGGGTGAAATGGTGGGGCCTCAGGGACGAGTCTGATGACCAGCTAAGGTTCCTTGTTGAGTGGCGACCACAGCCATGGGAGGCTACTGAACTTACAAGGCCAATGCCGCCTGGGGATATTGTGGTAGTACCACTGCATGCATCCATAGGCGAGCTGCTTGTTGAGGCAGAGCATGCACTGAGGGATACATACTGCTTCTTTGAGAATTTCCAGGCCGAGTCACTGGATGGCATTACTGGGGATAAATGGGATCCGGTGATGCTTGGTGGAGCAGAGTCTGGTGACACCATTGGTGTGCACGGCCACGGAGCTGACATGGAGACTGGGCTGCGGTGCCAGGGAGGTGCAGATGCGTGGGAGGTGCAGTGCGTTTGTGGTGCACAGGACGACGATGGGGAGCGCATGGTGGCATGCGATGCATGCAATGTCTGGCACCATACACGCTGTGTCGGCATTGCAGATGGTGCTCCGGTGCCACCATTGTTTCTCTGCATATCCTGCAGTGGCGCGCTAATGGCCGCTGGACCAATTTCTGGATGA
Protein Sequence
- >Zm00001eb216130_P001
MPSRRALRRSPPPRQSPQAAADAKEAASPWLPSSSSTSSSSSSASALVRRSAAFSAAGPRGGSGTRVYPLRDFPGGDAAALGGAFRDNVRWLLKQWSCVPGSVSAWRALLSDERTGALVPVIAVEELAASSPLPLCDLCRCAGWSHHWVSKRKYHFIIPAVVDWDQPFRADGLLGHSEHLLHGLIHSNGFGHLLTLRGRVGGSTFLSGCQIMDIWDQLCTALRVRAVSVVDLTQKYSVDLRLLLGVAQSKTWFTRWGYCLAKGCFSVSRSTYTAALEALAALPVDCLRSRHVRRVVTIYRRLSSKPLVTVREFLLCLLDWKHREPPLSPPPVKASSRLMFLLPKSCMMKRPRQPCQRFEDVVDLLECRWSKKRLLSAANVVVAKLREHADGTKITRQAVRDAARGGIGDTGLLDFVIKSLNNTVVGNHIVRRVPDPENRVLHFSLEEYAEPEPQPQADHELEPVELDAENTPPAVRWPNAAEAERDLRAVYRAMVGARSEAAQAVLDCKHWVKWWGLRDESDDQLRFLVEWRPQPWEATELTRPMPPGDIVVVPLHASIGELLVEAEHALRDTYCFFENFQAESLDGITGDKWDPVMLGGAESGDTIGVHGHGADMETGLRCQGGADAWEVQCVCGAQDDDGERMVACDACNVWHHTRCVGIADGAPVPPLFLCISCSGALMAAGPISG
Source: Genetic information comes from the article