Information report for ZmPHD11
Gene Details
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Functional Descriptions
- 12 genes in eight types, including ZmbHLH51, ZmbHLH122, ZmTGA9-1/-2/-3, ZmTGA10, ZmMYB84, ZmMYB33-1/-2, ZmPHD11 and ZmLBD10/27, were identified as maize new GMS genes by using DNA sequencing, phenotypic and cytological analyses.
- ZmPHD11 is the maize ortholog of the reported GMS genes OsTIP3 and AtMMD1 encoding PHD finger TFs.
- ZmPHD11 is required for maize male fertility via controlling the formation of anther cuticle and Ubisch bodies.
- The results showed that null mutations of eight-type TF genes, including ZmbHLH51, ZmbHLH122, ZmTGA9-1/-2/-3, ZmTGA10, ZmMYB84, ZmMYB33-1/-2, ZmPHD11 and ZmLBD10/27, resulted in male sterility with different kinds of anther and pollen defects.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100384509
- UniProt accessions: A0A1D6GJ36
- EMBL: CM000781
- EnsemblPlants: Zm00001eb216130_T001
- Gramene: Zm00001eb216130_T001
- OMA: RCSGWSH
- ExpressionAtlas: Zm00001eb216130
- InterPro: IPR001965 , IPR011011 , IPR013083 , IPR019786 , IPR019787
- PANTHER: PTHR46201 , PTHR46201:SF9
- SUPFAM: SSF57903
- PROSITE: PS01359
- Gene3D: 3.30.40.10
- OrthoDB: A0A1D6GJ36
- CDD: cd15556
Sequences
cDNA Sequence
- >Zm00001eb216130_T001
ACCTTCACTCGCAAGCCACAAATTACGGGAAAGCCCCTGCCGCCGCGAACCGAAACGCAAAACCCCAGCGCCCTTAGCAGGAGACGACGCTCTTGGCAATGCCGTCCAGGCGCGCGCTACGGCGGTCTCCGCCGCCACGACAGAGCCCGCAGGCAGCGGCGGACGCGAAGGAGGCGGCGAGCCCGTGGCTACCGTCCTCATCCTCCACCTCGTCGTCTTCCTCCTCAGCCTCCGCGCTCGTCAGGCGCTCCGCCGCCTTCTCGGCGGCTGGGCCGAGGGGCGGATCGGGGACGCGCGTGTACCCGTTGCGGGACTTCCCGGGCGGGGACGCGGCCGCGCTCGGCGGTGCGTTCCGGGACAACGTGCGGTGGCTCCTGAAGCAGTGGAGCTGCGTTCCGGGTTCCGTGTCGGCGTGGCGCGCGCTGCTGTCAGACGAGCGGACGGGCGCCTTAGTCCCCGTCATCGCCGTGGAGGAGCTCGCGGCATCGTCGCCCTTGCCGCTCTGCGATCTCTGTCGCTGCGCCGGTTGGAGCCACCACTGGGTGTCAAAGCGGAAGTACCATTTCATCATTCCGGCAGTGGTCGACTGGGACCAGCCATTCAGGGCTGATGGGTTACTTGGGCACAGCGAGCACCTCCTACATGGTCTGATCCATAGTAATGGCTTTGGTCACCTTCTCACCCTCCGTGGTCGTGTTGGTGGCTCCACTTTCCTCTCTGGCTGCCAGATCATGGATATATGGGATCAACTTTGCACAGCTCTCCGTGTAAGAGCCGTCTCTGTTGTGGACTTGACCCAGAAGTACTCTGTGGACCTCCGCCTCCTGCTTGGAGTGGCACAAAGCAAGACTTGGTTCACTCGCTGGGGGTACTGCCTTGCCAAGGGTTGTTTCAGCGTGTCTAGGTCCACTTATACTGCTGCACTTGAAGCCCTTGCTGCCCTGCCTGTTGATTGTCTCCGTAGTCGTCATGTCCGTCGTGTGGTCACCATCTACCGCCGCCTCTCCAGCAAACCTCTGGTTACAGTCCGCGAGTTTCTCCTCTGCCTGCTTGATTGGAAGCACCGTGAGCCCCCGCTTTCTCCTCCTCCCGTGAAGGCATCCTCGCGGCTGATGTTCTTGCTGCCAAAGTCATGTATGATGAAGAGGCCCAGGCAGCCATGTCAACGCTTTGAGGACGTAGTTGACCTGCTTGAGTGTCGGTGGTCAAAGAAGCGTCTGCTTAGTGCTGCAAATGTTGTTGTTGCAAAGCTGCGAGAGCATGCGGATGGCACAAAGATAACACGGCAAGCAGTGCGAGATGCTGCAAGGGGTGGCATCGGTGACACTGGTCTCCTGGACTTCGTCATCAAGTCCCTCAATAACACTGTTGTTGGTAACCACATTGTGCGCCGCGTGCCTGACCCTGAGAATCGTGTGCTTCACTTCAGCCTTGAGGAATATGCTGAGCCTGAGCCACAGCCACAGGCAGATCATGAGCTTGAACCAGTGGAACTTGATGCAGAGAACACCCCTCCTGCAGTCCGATGGCCAAACGCAGCCGAGGCGGAGCGGGATCTGCGTGCTGTGTACCGAGCAATGGTGGGGGCACGCAGTGAAGCAGCACAGGCTGTACTGGACTGCAAGCACTGGGTGAAATGGTGGGGCCTCAGGGACGAGTCTGATGACCAGCTAAGGTTCCTTGTTGAGTGGCGACCACAGCCATGGGAGGCTACTGAACTTACAAGGCCAATGCCGCCTGGGGATATTGTGGTAGTACCACTGCATGCATCCATAGGCGAGCTGCTTGTTGAGGCAGAGCATGCACTGAGGGATACATACTGCTTCTTTGAGAATTTCCAGGCCGAGTCACTGGATGGCATTACTGGGGATAAATGGGATCCGGTGATGCTTGGTGGAGCAGAGTCTGGTGACACCATTGGTGTGCACGGCCACGGAGCTGACATGGAGACTGGGCTGCGGTGCCAGGGAGGTGCAGATGCGTGGGAGGTGCAGTGCGTTTGTGGTGCACAGGACGACGATGGGGAGCGCATGGTGGCATGCGATGCATGCAATGTCTGGCACCATACACGCTGTGTCGGCATTGCAGATGGTGCTCCGGTGCCACCATTGTTTCTCTGCATATCCTGCAGTGGCGCGCTAATGGCCGCTGGACCAATTTCTGGATGAGACACTAACGGTACCTGAAGTTAAGTGACAATTCTTTTGCACCTTTTTCAGTTCATGCCTGACAGGTAGGTGTCTGACTAGTAAACCAGATACTATTGAGACCTCGTGTGTAAAGTGCGTTGCTGTAGTAGTATGTGATGAGTTTAGTAACGATGGAGTAATACCGAATGCTATCTGTACTAAGTCGACTAGTCGTAGTAGAGTAGAGAGGATTAGGCAGTAGAAAGGGAAGCACTATCCTTGTCGTTAGCAATCCGACTGGAAATTTTGTACATGGACATATTACAGAATAGACGCGGTAAATAGCTGTCCTGTGATTTGCGCCTTTCTACCGTCTGTGAATCTTGGCAACGAAGTTTAACTTGTTCATTGTGTTATAAGAATTTATTTATTGTGAGACAAAACAAGAATCATTTGTTGCTGTTTGATCTTGCC
CDS Sequence
- >Zm00001eb216130_T001
ATGCCGTCCAGGCGCGCGCTACGGCGGTCTCCGCCGCCACGACAGAGCCCGCAGGCAGCGGCGGACGCGAAGGAGGCGGCGAGCCCGTGGCTACCGTCCTCATCCTCCACCTCGTCGTCTTCCTCCTCAGCCTCCGCGCTCGTCAGGCGCTCCGCCGCCTTCTCGGCGGCTGGGCCGAGGGGCGGATCGGGGACGCGCGTGTACCCGTTGCGGGACTTCCCGGGCGGGGACGCGGCCGCGCTCGGCGGTGCGTTCCGGGACAACGTGCGGTGGCTCCTGAAGCAGTGGAGCTGCGTTCCGGGTTCCGTGTCGGCGTGGCGCGCGCTGCTGTCAGACGAGCGGACGGGCGCCTTAGTCCCCGTCATCGCCGTGGAGGAGCTCGCGGCATCGTCGCCCTTGCCGCTCTGCGATCTCTGTCGCTGCGCCGGTTGGAGCCACCACTGGGTGTCAAAGCGGAAGTACCATTTCATCATTCCGGCAGTGGTCGACTGGGACCAGCCATTCAGGGCTGATGGGTTACTTGGGCACAGCGAGCACCTCCTACATGGTCTGATCCATAGTAATGGCTTTGGTCACCTTCTCACCCTCCGTGGTCGTGTTGGTGGCTCCACTTTCCTCTCTGGCTGCCAGATCATGGATATATGGGATCAACTTTGCACAGCTCTCCGTGTAAGAGCCGTCTCTGTTGTGGACTTGACCCAGAAGTACTCTGTGGACCTCCGCCTCCTGCTTGGAGTGGCACAAAGCAAGACTTGGTTCACTCGCTGGGGGTACTGCCTTGCCAAGGGTTGTTTCAGCGTGTCTAGGTCCACTTATACTGCTGCACTTGAAGCCCTTGCTGCCCTGCCTGTTGATTGTCTCCGTAGTCGTCATGTCCGTCGTGTGGTCACCATCTACCGCCGCCTCTCCAGCAAACCTCTGGTTACAGTCCGCGAGTTTCTCCTCTGCCTGCTTGATTGGAAGCACCGTGAGCCCCCGCTTTCTCCTCCTCCCGTGAAGGCATCCTCGCGGCTGATGTTCTTGCTGCCAAAGTCATGTATGATGAAGAGGCCCAGGCAGCCATGTCAACGCTTTGAGGACGTAGTTGACCTGCTTGAGTGTCGGTGGTCAAAGAAGCGTCTGCTTAGTGCTGCAAATGTTGTTGTTGCAAAGCTGCGAGAGCATGCGGATGGCACAAAGATAACACGGCAAGCAGTGCGAGATGCTGCAAGGGGTGGCATCGGTGACACTGGTCTCCTGGACTTCGTCATCAAGTCCCTCAATAACACTGTTGTTGGTAACCACATTGTGCGCCGCGTGCCTGACCCTGAGAATCGTGTGCTTCACTTCAGCCTTGAGGAATATGCTGAGCCTGAGCCACAGCCACAGGCAGATCATGAGCTTGAACCAGTGGAACTTGATGCAGAGAACACCCCTCCTGCAGTCCGATGGCCAAACGCAGCCGAGGCGGAGCGGGATCTGCGTGCTGTGTACCGAGCAATGGTGGGGGCACGCAGTGAAGCAGCACAGGCTGTACTGGACTGCAAGCACTGGGTGAAATGGTGGGGCCTCAGGGACGAGTCTGATGACCAGCTAAGGTTCCTTGTTGAGTGGCGACCACAGCCATGGGAGGCTACTGAACTTACAAGGCCAATGCCGCCTGGGGATATTGTGGTAGTACCACTGCATGCATCCATAGGCGAGCTGCTTGTTGAGGCAGAGCATGCACTGAGGGATACATACTGCTTCTTTGAGAATTTCCAGGCCGAGTCACTGGATGGCATTACTGGGGATAAATGGGATCCGGTGATGCTTGGTGGAGCAGAGTCTGGTGACACCATTGGTGTGCACGGCCACGGAGCTGACATGGAGACTGGGCTGCGGTGCCAGGGAGGTGCAGATGCGTGGGAGGTGCAGTGCGTTTGTGGTGCACAGGACGACGATGGGGAGCGCATGGTGGCATGCGATGCATGCAATGTCTGGCACCATACACGCTGTGTCGGCATTGCAGATGGTGCTCCGGTGCCACCATTGTTTCTCTGCATATCCTGCAGTGGCGCGCTAATGGCCGCTGGACCAATTTCTGGATGA
Protein Sequence
- >Zm00001eb216130_P001
MPSRRALRRSPPPRQSPQAAADAKEAASPWLPSSSSTSSSSSSASALVRRSAAFSAAGPRGGSGTRVYPLRDFPGGDAAALGGAFRDNVRWLLKQWSCVPGSVSAWRALLSDERTGALVPVIAVEELAASSPLPLCDLCRCAGWSHHWVSKRKYHFIIPAVVDWDQPFRADGLLGHSEHLLHGLIHSNGFGHLLTLRGRVGGSTFLSGCQIMDIWDQLCTALRVRAVSVVDLTQKYSVDLRLLLGVAQSKTWFTRWGYCLAKGCFSVSRSTYTAALEALAALPVDCLRSRHVRRVVTIYRRLSSKPLVTVREFLLCLLDWKHREPPLSPPPVKASSRLMFLLPKSCMMKRPRQPCQRFEDVVDLLECRWSKKRLLSAANVVVAKLREHADGTKITRQAVRDAARGGIGDTGLLDFVIKSLNNTVVGNHIVRRVPDPENRVLHFSLEEYAEPEPQPQADHELEPVELDAENTPPAVRWPNAAEAERDLRAVYRAMVGARSEAAQAVLDCKHWVKWWGLRDESDDQLRFLVEWRPQPWEATELTRPMPPGDIVVVPLHASIGELLVEAEHALRDTYCFFENFQAESLDGITGDKWDPVMLGGAESGDTIGVHGHGADMETGLRCQGGADAWEVQCVCGAQDDDGERMVACDACNVWHHTRCVGIADGAPVPPLFLCISCSGALMAAGPISG