Gene Details:
- Gene ID: Zm00001eb213020
- Gene Symbol: ZmPPR26|ppr13
- Gene Name: pentatricopeptide repeat13
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmPPR26|ppr13, a DYW-type pentatricopeptide repeat protein, is required for C-to-U RNA editing at atpA-1148 in maize chloroplasts.
- ZmPPR26|ppr13 encodes a DYW-type PPR protein targeted to chloroplasts,the function of ZmPPR26|ppr13 in the C-to-U RNA editing and chloroplast biogenesis in maize.
- Overexpression of ZmPPR26|ppr13 in ZmPPR26|ppr13 restores the editing efficiency and rescues the albino seedling-lethal phenotype. Abolished editing at atpA-1148 causes a Leu to Ser change at AtpA-383 that leads to a reduction in the abundance of chloroplast ATP synthase in ZmPPR26|ppr13.
- ZmPPR26|ppr13 is required for the editing at atpA-1148 and is important for editing at the other seven sites in maize chloroplasts.
Function-related keywords:
Literature:
- ZmPPR26, a DYW-type pentatricopeptide repeat protein, is required for C-to-U RNA editing at atpA-1148 in maize chloroplasts. DOI: 10.1093/jxb/erab185 ; PMID: 33929512
Related News:
Gene Resources:
- NCBI ID: LOC100191499
- UniProt accessions: A0A804P7B2
Orthologs:
Sequences:
cDNA Sequence
- >Zm00001eb213020_T001
GGTCAGCCAGGCCCAACTGCCGATCGTCAGTTCCTTCTCCAAGTAGAAACCCCGAAGGCCCGAAGCGTCGCTAATCTCTTCTCCGGTGCCGCTACTCTCTCTCGAAGATAACGGGACTGGGGTGCTGGGCGGGCGGCCATGTCGTCCGCGCCTCTGACCGCCACGCCAGCCCCTCTCCTTCCCGCCAACAAACCCAAGAGCGCAGCACCGCAGCACCCGCTCCTCTCCCACCTCCCGCACTGCACCAGCCTCCGCGGGCTCGCCCAGCTCCACGCCGCCGCCGTTAAGGCCGGCCTCGCCGCGCACCCCGCCTTGGTCACCAGGCTCCTCACGCTCTGCACCGGCCCGGGCGCGGGCCCCGCCCACCTCGCCTACGCCCGCCAGGTGTTCGACAGGGTGACCCAACCGTCGGACGCCGTCTGGTACAACACCTTGCTCCGCGGCTACGCGCGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGCGGCGGCGGTGCGGGTGTTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCCGCGGCGCGCGCGGGGGAGCACGGGCGGCAGGCGCACGCCGTGGCGGTCAAGCTCGGCGCCGCGGGCCACGACTACGTCCGCCCCACGCTCATCAACATGTACGCCGAGTGCGGGGACGCGCGCGCCGCGCGCGTCACGTTTGGCAGGGCGGACGGGGACTGCGTGGTCTCGTACAACGCGATGATCGCCGCGGCCGTCAGGAGCAGCCGGCCCGGGGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAACCCGACGCCCGTGACGGTGATCAGCGTGCTCTCGGCGTGCGCGCTGCTCGGGGCGCTCCAACTTGGGAGGTGGCTCCACGATTATGTTCGGAAGCTAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCACTGGTCGACATGTATGCCAAGTGTGGGAGCCTGGAGGACGCCATTGCTGTGTTTCAGGGGATGGAATCAAGAGACAGGCAAGCTTGGTCAGTGATGATCGTTGCGTACGCTAACCATGGGTATGGCAGGGAGGCCATTTCGCTGTTTGAGGAGATGAAGAAGCAAGGGATGAAACCCGATGATATTACATTCCTTGGTCTGCTCTATGCCTGTAGCCACTCTGGTCTCGTGAGTGAAGGGCTTCGGTATTTTGACGATATGAAAGATCATGGCATTGTTCCAGGGATCAAGCACTATGGTTGCGTGACAGATTTACTAGCTCGCTCAGGGCAGCTGGAGAGAGCTTATAAGTTCATCGATGAACTGCCAATAAATCCCACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGATGTCGAACTTGGCAAGCGTGTCTTTGAGAGGATTCTTGAGCTGGACGATTCTCATGGTGGTGATTATGTAATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATAGGGTAAGGAAACTGATGAGCGACAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAGATAGATAACACGGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAAGCACGGAAAATGGTTGATGAAGTGATCGATCAACTAAAGCTTGTTGGTTATATCCCTGATACCTCACATGTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCGATAAGCCTAAAATACCATAGTGAGAAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCTCCAGGGGCTACACTGCGTGTTGTCAAGAATCTCCGCGTATGCCCAGATTGCCATTCGATGGCAAAGTTTGTCTCAATGGTCTTCAATAGGCGAATTATACTCAGAGATCTCAATCGCTTCCATCACTTTGAAAGAGGGATATGCTCTTGTGGTGACTATTGGTAAATTTGTAGGAACAAAATTCTTGCACCTCGATATCTTGTATTGCAATGCCTTCCACTCAGGTTGTGGTGAATCTGTATATCCATGGAAAACCTACTGACGACTGATGATTCTTTCTATGAATATTATTGGCACTGAATGATACTATGTTATGTAACCTTGATTTTGCTGTTGGATATCCAATTGTGGCCAAAGCCCATCAACTTGCTGATTTTCGGAGTTGAGTGCACCACATTGCTGTGGCAGCAGCTGCCTCTCCAGTCTCCCCACATCGCTGCCCTCGTCCACCATGGATCGGCGTCCTGTGCGGGCCGCTGCCGACAAGTTCGTCCTATGCCAAGCTCTTGACCCTCTGCCACAATGTCGCCGCAAAGGGTGCCAAGGAACCCACCTCCACGGTTGTTGCTGTTTCTTGGATATGATACCTTACTAGTGTTGAGTTTGTGATCCAAATTCTGAAGAAGGCGGCCAAGTTGGCGAGCAAAGCGGAGGCCCGTCACGGTACGCATCCTTCTCTACTCACCTTAGGGTTTCGCCTCTATAAATACACTTGTAATCCGCAAGAGATAATCATCTCAGTGTAAATCTCCTGCGATCTGTAACCACCCGAAAAATAGTGAGATTTTTGCTGGCCGGTGCCCGTGGTTTTTCCC - >Zm00001eb213020_T002
GGTCAGCCAGGCCCAACTGCCGATCGTCAGTTCCTTCTCCAAGTAGAAACCCCGAAGGCCCGAAGCGTCGCTAATCTCTTCTCCGGTGCCGCTACTCTCTCTCGAAGATAACGGGACTGGGGTGCTGGGCGGGCGGCCATGTCGTCCGCGCCTCTGACCGCCACGCCAGCCCCTCTCCTTCCCGCCAACAAACCCAAGAGCGCAGCACCGCAGCACCCGCTCCTCTCCCACCTCCCGCACTGCACCAGCCTCCGCGGGCTCGCCCAGCTCCACGCCGCCGCCGTTAAGGCCGGCCTCGCCGCGCACCCCGCCTTGGTCACCAGGCTCCTCACGCTCTGCACCGGCCCGGGCGCGGGCCCCGCCCACCTCGCCTACGCCCGCCAGGTGTTCGACAGGGTGACCCAACCGTCGGACGCCGTCTGGTACAACACCTTGCTCCGCGGCTACGCGCGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGCGGCGGCGGTGCGGGTGTTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCCGCGGCGCGCGCGGGGGAGCACGGGCGGCAGGCGCACGCCGTGGCGGTCAAGCTCGGCGCCGCGGGCCACGACTACGTCCGCCCCACGCTCATCAACATGTACGCCGAGTGCGGGGACGCGCGCGCCGCGCGCGTCACGTTTGGCAGGGCGGACGGGGACTGCGTGGTCTCGTACAACGCGATGATCGCCGCGGCCGTCAGGAGCAGCCGGCCCGGGGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAACCCGACGCCCGTGACGGTGATCAGCGTGCTCTCGGCGTGCGCGCTGCTCGGGGCGCTCCAACTTGGGAGGTGGCTCCACGATTATGTTCGGAAGCTAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCACTGGTCGACATGTATGCCAAGTGTGGGAGCCTGGAGGACGCCATTGCTGTGTTTCAGGGGATGGAATCAAGAGACAGGCAAGCTTGGTCAGTGATGATCGTTGCGTACGCTAACCATGGGTATGGCAGGGAGGCCATTTCGCTGTTTGAGGAGATGAAGAAGCAAGGGATGAAACCCGATGATATTACATTCCTTGGTCTGCTCTATGCCTGTAGCCACTCTGGTCTCGTGAGTGAAGGGCTTCGGTATTTTGACGATATGAAAGATCATGGCATTGTTCCAGGGATCAAGCACTATGGTTGCGTGACAGATTTACTAGCTCGCTCAGGGCAGCTGGAGAGAGCTTATAAGTTCATCGATGAACTGCCAATAAATCCCACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGATGTCGAACTTGGCAAGCGTGTCTTTGAGAGGATTCTTGAGCTGGACGATTCTCATGGTGGTGATTATGTAATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATAGGGTAAGGAAACTGATGAGCGACAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAGATAGATAACACGGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAAGCACGGAAAATGGTTGATGAAGTGATCGATCAACTAAAGCTTGTTGGTTATATCCCTGATACCTCACATGTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCGATAAGCCTAAAATACCATAGTGAGAAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCTCCAGGGGCTACACTGCGTGTTGTCAAGAATCTCCGCGTATGCCCAGATTGCCATTCGATGGCAAAGTTTGTCTCAATGGTCTTCAATAGGCGAATTATACTCAGAGATCTCAATCGCTTCCATCACTTTGAAAGAGGGATATGCTCTTGTGGTGACTATTGGTAAATTTGTAGGAACAAAATTCTTGCACCTCGATATCTTGTATTGCAATGCCTTCCACTCAGGTTGTGGTGAATCTGTATATCCATGGAAAACCTACTGACGACTGATGATTCTTTCTATGAATATTATTGGCACTGAATGATACTATGTTATGTAACCTTGATTTTGCTGTTGGATATCCAATTGTGGCCAAAGCCCATCAACTTGCTGATTTTCGGAGTTGAGTGCACCACATTGCTGTGGCAGCAGCTGCCTCTCCAGTCTCCCCACATCGCTGCCCTCGTCCACCATGGATCGGCGTCCTGTGCGGGCCGCTGCCGACAAGTTCGTCCTATGCCAAGCTCTTGACCCTCTGCCACAATGTCGCCGCAAAGGGTGCCAAGGAACCCACCTCCACGGTTGTTGCTGTTTCTTGGATATGATACCTTACTAGTGTTGAGTTTGTGATCCAAATTCTGAAGAAGGCGGCCAAGTTGGCGAGCAAAGCGGAGGCCCGTCACGGTACGCATCCTTCTCTACTCACCTTAGGGTTTCGCCTCTATAAATACACTTGTAATCCGCAAGAGATAATCATCTCAGTGTAAATCTCCTGCGATCTGTAACCACCCGAAAAATAGTGAGATTTTTGCTGGCCGGTGCCCGTGGTTTTTCCC
CDS Sequence
- >Zm00001eb213020_T001
ATGTCGTCCGCGCCTCTGACCGCCACGCCAGCCCCTCTCCTTCCCGCCAACAAACCCAAGAGCGCAGCACCGCAGCACCCGCTCCTCTCCCACCTCCCGCACTGCACCAGCCTCCGCGGGCTCGCCCAGCTCCACGCCGCCGCCGTTAAGGCCGGCCTCGCCGCGCACCCCGCCTTGGTCACCAGGCTCCTCACGCTCTGCACCGGCCCGGGCGCGGGCCCCGCCCACCTCGCCTACGCCCGCCAGGTGTTCGACAGGGTGACCCAACCGTCGGACGCCGTCTGGTACAACACCTTGCTCCGCGGCTACGCGCGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGCGGCGGCGGTGCGGGTGTTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCCGCGGCGCGCGCGGGGGAGCACGGGCGGCAGGCGCACGCCGTGGCGGTCAAGCTCGGCGCCGCGGGCCACGACTACGTCCGCCCCACGCTCATCAACATGTACGCCGAGTGCGGGGACGCGCGCGCCGCGCGCGTCACGTTTGGCAGGGCGGACGGGGACTGCGTGGTCTCGTACAACGCGATGATCGCCGCGGCCGTCAGGAGCAGCCGGCCCGGGGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAACCCGACGCCCGTGACGGTGATCAGCGTGCTCTCGGCGTGCGCGCTGCTCGGGGCGCTCCAACTTGGGAGGTGGCTCCACGATTATGTTCGGAAGCTAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCACTGGTCGACATGTATGCCAAGTGTGGGAGCCTGGAGGACGCCATTGCTGTGTTTCAGGGGATGGAATCAAGAGACAGGCAAGCTTGGTCAGTGATGATCGTTGCGTACGCTAACCATGGGTATGGCAGGGAGGCCATTTCGCTGTTTGAGGAGATGAAGAAGCAAGGGATGAAACCCGATGATATTACATTCCTTGGTCTGCTCTATGCCTGTAGCCACTCTGGTCTCGTGAGTGAAGGGCTTCGGTATTTTGACGATATGAAAGATCATGGCATTGTTCCAGGGATCAAGCACTATGGTTGCGTGACAGATTTACTAGCTCGCTCAGGGCAGCTGGAGAGAGCTTATAAGTTCATCGATGAACTGCCAATAAATCCCACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGATGTCGAACTTGGCAAGCGTGTCTTTGAGAGGATTCTTGAGCTGGACGATTCTCATGGTGGTGATTATGTAATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATAGGGTAAGGAAACTGATGAGCGACAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAGATAGATAACACGGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAAGCACGGAAAATGGTTGATGAAGTGATCGATCAACTAAAGCTTGTTGGTTATATCCCTGATACCTCACATGTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCGATAAGCCTAAAATACCATAGTGAGAAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCTCCAGGGGCTACACTGCGTGTTGTCAAGAATCTCCGCGTATGCCCAGATTGCCATTCGATGGCAAAGTTTGTCTCAATGGTCTTCAATAGGCGAATTATACTCAGAGATCTCAATCGCTTCCATCACTTTGAAAGAGGGATATGCTCTTGTGGTGACTATTGGTAA - >Zm00001eb213020_T002
ATGTCGTCCGCGCCTCTGACCGCCACGCCAGCCCCTCTCCTTCCCGCCAACAAACCCAAGAGCGCAGCACCGCAGCACCCGCTCCTCTCCCACCTCCCGCACTGCACCAGCCTCCGCGGGCTCGCCCAGCTCCACGCCGCCGCCGTTAAGGCCGGCCTCGCCGCGCACCCCGCCTTGGTCACCAGGCTCCTCACGCTCTGCACCGGCCCGGGCGCGGGCCCCGCCCACCTCGCCTACGCCCGCCAGGTGTTCGACAGGGTGACCCAACCGTCGGACGCCGTCTGGTACAACACCTTGCTCCGCGGCTACGCGCGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGCGGCGGCGGTGCGGGTGTTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCCGCGGCGCGCGCGGGGGAGCACGGGCGGCAGGCGCACGCCGTGGCGGTCAAGCTCGGCGCCGCGGGCCACGACTACGTCCGCCCCACGCTCATCAACATGTACGCCGAGTGCGGGGACGCGCGCGCCGCGCGCGTCACGTTTGGCAGGGCGGACGGGGACTGCGTGGTCTCGTACAACGCGATGATCGCCGCGGCCGTCAGGAGCAGCCGGCCCGGGGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAACCCGACGCCCGTGACGGTGATCAGCGTGCTCTCGGCGTGCGCGCTGCTCGGGGCGCTCCAACTTGGGAGGTGGCTCCACGATTATGTTCGGAAGCTAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCACTGGTCGACATGTATGCCAAGTGTGGGAGCCTGGAGGACGCCATTGCTGTGTTTCAGGGGATGGAATCAAGAGACAGGCAAGCTTGGTCAGTGATGATCGTTGCGTACGCTAACCATGGGTATGGCAGGGAGGCCATTTCGCTGTTTGAGGAGATGAAGAAGCAAGGGATGAAACCCGATGATATTACATTCCTTGGTCTGCTCTATGCCTGTAGCCACTCTGGTCTCGTGAGTGAAGGGCTTCGGTATTTTGACGATATGAAAGATCATGGCATTGTTCCAGGGATCAAGCACTATGGTTGCGTGACAGATTTACTAGCTCGCTCAGGGCAGCTGGAGAGAGCTTATAAGTTCATCGATGAACTGCCAATAAATCCCACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGATGTCGAACTTGGCAAGCGTGTCTTTGAGAGGATTCTTGAGCTGGACGATTCTCATGGTGGTGATTATGTAATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATAGGGTAAGGAAACTGATGAGCGACAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAGATAGATAACACGGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAAGCACGGAAAATGGTTGATGAAGTGATCGATCAACTAAAGCTTGTTGGTTATATCCCTGATACCTCACATGTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCGATAAGCCTAAAATACCATAGTGAGAAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCTCCAGGGGCTACACTGCGTGTTGTCAAGAATCTCCGCGTATGCCCAGATTGCCATTCGATGGCAAAGTTTGTCTCAATGGTCTTCAATAGGCGAATTATACTCAGAGATCTCAATCGCTTCCATCACTTTGAAAGAGGGATATGCTCTTGTGGTGACTATTGGTAA
Protein Sequence
- >Zm00001eb213020_P001
MSSAPLTATPAPLLPANKPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW - >Zm00001eb213020_P002
MSSAPLTATPAPLLPANKPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW
Source: Genetic information comes from the article