Gene Details:

Functional Descriptions:

  • Maize PPR-E proteins mediate RNA C-to-U editing in mitochondria by recruiting the trans deaminase PCW1|ppr199.
  • Report that pentatricopeptide repeat (PPR)-E subclass proteins carry out RNA C-to-U editing by recruiting the trans deaminase PPR motifs, coiled-coil, and DYW domain-containing protein 1 (PCW1|ppr199) in maize (Zea mays) mitochondria
  • Loss-of-function of bZIP and coiled-coil domain-containing PPR 1 (bCCP1) or PCW1|ppr199 arrests seed development in maize. bCCP1 encodes a bZIP and coiled-coil domain-containing PPR protein, and PCW1|ppr199 encodes an atypical PPR–DYW protein.
  • The PCW1|ppr199-mediated editing sites are exclusively associated with PPR-E proteins. bCCP1 interacts with PCW1|ppr199 and the PPR-E protein Empty pericarp7 (EMP7).
  • These results suggest that PPR-E proteins function in RNA editing by recruiting the trans deaminase PCW1|ppr199 and bCCP1, and MORF1/8 assist this recruitment through protein–protein interactions.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Zm00001eb153890_T001
    GGCTGGTCCCATATGCCTCAGCCCAGGCGTCAGATACTCGATATGCTGATCACGCCACAGCTCTAGCCTGCACAGAAAACAACTCGACAACAAAAGGCTGATGAGGAGACAGTGGACCCACACCCTAATATCAACTCACATTCAAGTGTTTGTGTCTAAGACGCTATCCAACAATACATAACTAGCAGTACTAAGCTTCTGTACGCACCAAATCAGAAACCCTGCACTGAACTATCTGGTGCCACGGGCAAAGTTATCAGAGGACTAGCTATTTTTCAAGCTACAGCGTATCAAATACTCCAATATCCAAACTAAATCCATGCGTTGAGACCCGCCAAGCACTGCCGGCTGTCGGCAGCCAGGGGATATACTCAAATAGAAGTGAGAAAACTAGCGTGTGCTTAGGGATGCTCACATGATGGATTTCGTGTTGGGCGCGGCCCCGAAGAGGGAGCGGTAGATGTCGCCAACCCTGGCCTCCACCTTCATCTGCTCCACCTGCGTCACCGTGAGCCTCGGTAGGTCGGGATCCGCCGCCGCTGCCGGGTCGTCTCCGGTGGGCGGCGTCGACTGCGGGGAGGGGTCCATGGACGCAGCGGCCTGGTGTGGAGTCGGAGGCGGAGCGCCGCCGCCTGGCTGCGCTCTCGAGTGCTGCGGCCTGCGGTTTCGGCAGTGCTGCCCTTGCTGTTGCGGCCTTGCGGGGTCCGGTTCTCGGCTGCTTCGGTGTTGTGGTGAGACGGGTGAGCGGAGCAATCTTACGATGCCGCGAGACGGGTGAGCCCAACCAATAATTTCATTGAGCCGGCCCAATCACACTGACCAGAGCTATGTTATCCAACCCGATACCACACCAAACCCACGACGGCACCGCAGCAACCCATTCCATAGCCACGCGAGTGACGCGACGCGACGCACGGCCTGCCTGAGGCAGCGCATCTGCTTGGCGGCCGGGAGCAGCCGCCGCTTCGCCTTCGTGAGGGTTTAAGCGACGAAGAGAAAGGGGAGGAAGCGAGCCCCCAGGGAGGTGCAGAGGGAGAGGGTGGGAGATGGCTGCAATGGTTGGAGCGCGTAGGGCGCTCTTGGCCGCTCGGTTCTCTCCTCGCGGCACCATCGCGGCGTCGGCCGCGCCAGCTCCCCTCTACCGGCCCATGGATTCGCCACTCAGGCTTCCAGCTGAAAGAGTTTGTCTACAGTCTTGGGTTCCACATCGAGGGGCTGGTACCTTTGCATCTGAAAGGACTGATGAAGATTATCAGCGTGAGTGGGGACAAAACAAAGCAGGTAGCTACACTGACTCCCGTTGGAACGGCTCTAATCTCCAACTTCAGAGAGATGTCACTTCAGCTGGTTCCACAACAGGTACTCACAAAAATAAGGGTGTGGATGGTGTTGGTGGCAGTTCTGAGCAACATTACAGAAGTGGTGGATCATATGGCTTTCAAAACAATCATCAGCCATATACTGGTACAAGAGCGAATAATGAGAGATACAATGCATCACAACCTTATAGAGGTAGTGGTCCATACAGCCAGCAAGGCCTTGATGGACATTTTTCAAATGATCGTCAACAGTACAATGGCACAGAAGCTAATAGTACATATAGCTCTGGATACTACACCCAAAGTAAGCAGAAGATTTATGAAGGAGAGGGAGCTAATAATGGGCAGTATGGATATGGTCCTTCAGGACAACCATGTCCGAACCCAGTTGGAAATAGCCAGCGAGTTCAGAAACAGCAATATGTTGATCATAGATCTGGGGGAAGTTATCCAGATAGATCTGGGCATCATCCCTCTCAATATGTAAATCCAACTCATTCCCGTAAGGAGCATGTTGCAGGGTTTCAGCAAGGCAACAATAGTAATTTTGGATATAATGCTTCGCAGGCATATCAAAGCCCTTATTTCACTAGGCAGGCTGATACACATAGTACTTCTCAAGGATATTCCATGTACCTAAATACAGATGTGCAACGCCTCTCTCATGGAGTTCATCAAGAAAAACATTCACATGCACAATCTGCTGGATCATTTGGGAACCATGTAAATAGTGCACCTCATGAATATGGCAAATATCATCAGTCACTACAAGGCAACCCTTCAAATGTTGGATCGCCTTACGAAGTACCTAGTGAAGCTGGCAGCAAACACAAATGTACTGTTGAAGAACTGGAGAAGTTTTGTGATGATGGCAATGTAAAAGAAGCTCTGGAAGTTTTGGCTATGCTAAAGGAAAACAGAATTGTGCTACATGCTCCTCAGTACTTCAGATTGATGCAAGCATGTGGTGATGCAACTGCCCTTTCAGAAGCAAGATTAATACATAGTCAAATATCTGAATCATCACTTACTGTTGACACAGATTTTCAAAACAAAATTATGGAGATGTATGCTAGGTGTGGTTCTATGGAAGATGCAAAGAAGATTTTCAGTTCTATGGATCATCATAATTTGACTTCTTGGAACACTATGATCTCAGGTTTTGTGCACAATGTTCTTGGTGAAGAAGCAATAGATTTTTTTGAACGGTTTAAGCAGACAGGGGACAAGCCAGATCATGGCATGTTCAGACATGTTTTCTTGGCATGTGGAATTTTGGGATCTGTTAATGAAGGAATGTTGCATTTTGAATCCATGCAGAAAGATTTTGGCATACATCCCACTACAGAGCATTATGCAAGCATTGTTACTATGCTTGGACAGTCTGGCTACATTGTCGAGGCTTATGAATTCGTGGAACGGATGCCTGTGGAACCAAGCATTGAGGTATGGGAAAATTTGATGAACATGTGTCGACTTAATGGCTTTTTAGAGCTTGGAGATCGTTGTGCTCAGATCATAGAGTGCTTGGATTCTTCTAGGCTGAATGAACAGTCTAAAATGGGTCTGTTCCCTGTCGATGTGTCAGATCTTGCAAAGGAAAAGGAAAGGAAAAAGGCAAGTGTCGCCGAAGCTCGGAGCAAGGTCCATGAATACAGAGCTGGCGACCGATCTCACCCTGACACTCCTAAGATCTATGAAGAGCTGAGGTATTTGTTGGCTCACATGAAGGAAGCTGGGTATATTGCTGACACTCGATTTGTTCTTCACGATGTTGATCAAGAAACCAAAGAGGATGCTTTACTGGCTCACAGTGAGAGGCTGGCTATCAGTTACGGTCTTATAACAAGTGCTCCCCGCTCACCTATTCGGGTTATAAAGAATCTTCGATCCTGTGGGGATTGTCACACGGCTTTCAAGATAATCTCAAAACTTGTTGGACGTCAGATCATTGCAAGGGATGCAAAGAGGTTCCACCACTTCGAAAATGGTGTGTGTTCTTGCAAAGACTACTGGTAAACAAGATGAAAGAAAGTCCACATCTTGGTCAATTTTTATTGGCACAAGACCGCTATAGGTTGTTTATGTGCTGAAGGTAGGCTGATGCCTATCTAACATTTAGTTAGCTAATAGTTTCATGTGAGAGACATGCTGTATGATGTCGTCAGTGAGAAACAGCCAAACAGGTCCTAAGCAGCTCTGGTGTTCTATTTTGCAGCTCATACGTTAAGCCTGAGCTTTTACTTTAACAACTGTTGTCTCTGATTTGTTACTTGCCACCAAAATAAAACAGTAGAATGTAACTGGGTAGTGGTCCCTTGGCATGTAAACTTTGATTCAGCTGATTACAAAGCTTTCTGACTGCATTCTGGATCCATTGCTTATATAGCTAGCAGGAGCCTTTTCTTGTGCC
CDS Sequence
  • >Zm00001eb153890_T001
    ATGGCTGCAATGGTTGGAGCGCGTAGGGCGCTCTTGGCCGCTCGGTTCTCTCCTCGCGGCACCATCGCGGCGTCGGCCGCGCCAGCTCCCCTCTACCGGCCCATGGATTCGCCACTCAGGCTTCCAGCTGAAAGAGTTTGTCTACAGTCTTGGGTTCCACATCGAGGGGCTGGTACCTTTGCATCTGAAAGGACTGATGAAGATTATCAGCGTGAGTGGGGACAAAACAAAGCAGGTAGCTACACTGACTCCCGTTGGAACGGCTCTAATCTCCAACTTCAGAGAGATGTCACTTCAGCTGGTTCCACAACAGGTACTCACAAAAATAAGGGTGTGGATGGTGTTGGTGGCAGTTCTGAGCAACATTACAGAAGTGGTGGATCATATGGCTTTCAAAACAATCATCAGCCATATACTGGTACAAGAGCGAATAATGAGAGATACAATGCATCACAACCTTATAGAGGTAGTGGTCCATACAGCCAGCAAGGCCTTGATGGACATTTTTCAAATGATCGTCAACAGTACAATGGCACAGAAGCTAATAGTACATATAGCTCTGGATACTACACCCAAAGTAAGCAGAAGATTTATGAAGGAGAGGGAGCTAATAATGGGCAGTATGGATATGGTCCTTCAGGACAACCATGTCCGAACCCAGTTGGAAATAGCCAGCGAGTTCAGAAACAGCAATATGTTGATCATAGATCTGGGGGAAGTTATCCAGATAGATCTGGGCATCATCCCTCTCAATATGTAAATCCAACTCATTCCCGTAAGGAGCATGTTGCAGGGTTTCAGCAAGGCAACAATAGTAATTTTGGATATAATGCTTCGCAGGCATATCAAAGCCCTTATTTCACTAGGCAGGCTGATACACATAGTACTTCTCAAGGATATTCCATGTACCTAAATACAGATGTGCAACGCCTCTCTCATGGAGTTCATCAAGAAAAACATTCACATGCACAATCTGCTGGATCATTTGGGAACCATGTAAATAGTGCACCTCATGAATATGGCAAATATCATCAGTCACTACAAGGCAACCCTTCAAATGTTGGATCGCCTTACGAAGTACCTAGTGAAGCTGGCAGCAAACACAAATGTACTGTTGAAGAACTGGAGAAGTTTTGTGATGATGGCAATGTAAAAGAAGCTCTGGAAGTTTTGGCTATGCTAAAGGAAAACAGAATTGTGCTACATGCTCCTCAGTACTTCAGATTGATGCAAGCATGTGGTGATGCAACTGCCCTTTCAGAAGCAAGATTAATACATAGTCAAATATCTGAATCATCACTTACTGTTGACACAGATTTTCAAAACAAAATTATGGAGATGTATGCTAGGTGTGGTTCTATGGAAGATGCAAAGAAGATTTTCAGTTCTATGGATCATCATAATTTGACTTCTTGGAACACTATGATCTCAGGTTTTGTGCACAATGTTCTTGGTGAAGAAGCAATAGATTTTTTTGAACGGTTTAAGCAGACAGGGGACAAGCCAGATCATGGCATGTTCAGACATGTTTTCTTGGCATGTGGAATTTTGGGATCTGTTAATGAAGGAATGTTGCATTTTGAATCCATGCAGAAAGATTTTGGCATACATCCCACTACAGAGCATTATGCAAGCATTGTTACTATGCTTGGACAGTCTGGCTACATTGTCGAGGCTTATGAATTCGTGGAACGGATGCCTGTGGAACCAAGCATTGAGGTATGGGAAAATTTGATGAACATGTGTCGACTTAATGGCTTTTTAGAGCTTGGAGATCGTTGTGCTCAGATCATAGAGTGCTTGGATTCTTCTAGGCTGAATGAACAGTCTAAAATGGGTCTGTTCCCTGTCGATGTGTCAGATCTTGCAAAGGAAAAGGAAAGGAAAAAGGCAAGTGTCGCCGAAGCTCGGAGCAAGGTCCATGAATACAGAGCTGGCGACCGATCTCACCCTGACACTCCTAAGATCTATGAAGAGCTGAGGTATTTGTTGGCTCACATGAAGGAAGCTGGGTATATTGCTGACACTCGATTTGTTCTTCACGATGTTGATCAAGAAACCAAAGAGGATGCTTTACTGGCTCACAGTGAGAGGCTGGCTATCAGTTACGGTCTTATAACAAGTGCTCCCCGCTCACCTATTCGGGTTATAAAGAATCTTCGATCCTGTGGGGATTGTCACACGGCTTTCAAGATAATCTCAAAACTTGTTGGACGTCAGATCATTGCAAGGGATGCAAAGAGGTTCCACCACTTCGAAAATGGTGTGTGTTCTTGCAAAGACTACTGGTAA
Protein Sequence
  • >Zm00001eb153890_P001
    MAAMVGARRALLAARFSPRGTIAASAAPAPLYRPMDSPLRLPAERVCLQSWVPHRGAGTFASERTDEDYQREWGQNKAGSYTDSRWNGSNLQLQRDVTSAGSTTGTHKNKGVDGVGGSSEQHYRSGGSYGFQNNHQPYTGTRANNERYNASQPYRGSGPYSQQGLDGHFSNDRQQYNGTEANSTYSSGYYTQSKQKIYEGEGANNGQYGYGPSGQPCPNPVGNSQRVQKQQYVDHRSGGSYPDRSGHHPSQYVNPTHSRKEHVAGFQQGNNSNFGYNASQAYQSPYFTRQADTHSTSQGYSMYLNTDVQRLSHGVHQEKHSHAQSAGSFGNHVNSAPHEYGKYHQSLQGNPSNVGSPYEVPSEAGSKHKCTVEELEKFCDDGNVKEALEVLAMLKENRIVLHAPQYFRLMQACGDATALSEARLIHSQISESSLTVDTDFQNKIMEMYARCGSMEDAKKIFSSMDHHNLTSWNTMISGFVHNVLGEEAIDFFERFKQTGDKPDHGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTTEHYASIVTMLGQSGYIVEAYEFVERMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIECLDSSRLNEQSKMGLFPVDVSDLAKEKERKKASVAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAFKIISKLVGRQIIARDAKRFHHFENGVCSCKDYW

Source: Genetic information comes from the article