Gene Details:
- Gene ID: Zm00001eb010770
- Gene Symbol: ZmNF-YC1|ca5p11
- Gene Name: CCAAT-HAP5-transcription factor 511
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The upstream regulator ZmNF-YC1|ca5p11 of ZmAPRG by yeast one hybrid (Y1H) assay, and found it was a low inorganic phosphorus (Pi)-inducible gene.
- Overexpression of ZmNF-YC1|ca5p11 improved low P tolerance, whereas knockout of ZmNF-YC1|ca5p11 decreased low P tolerance in maize.
- Bimolecular fluorescence complementation (BiFC), yeast two hybrid (Y2H) assay, and yeast three hybrid (Y3H) assay further showed that ZmNF-YC1|ca5p11 can interact with ZmNF-YB14, and recruit ZmNF-YA4/10 to form NF-Y complexes.
- Our research revealed a low P tolerance mechanism of the ZmNF-YC1|ca5p11–ZmAPRG pathway.
Function-related keywords:
- tolerance , phosphorus , pi
Literature:
- The ZmNF-YC1-ZmAPRG pathway modulates low phosphorus tolerance in maize. DOI: 10.1093/jxb/erae068 ; PMID: 38393826
Related News:
Gene Resources:
- NCBI ID: LOC100281601
- UniProt accessions: A0A317YFQ9 , B6SWV5
Orthologs:
Sequences:
cDNA Sequence
- >Zm00001eb010770_T001
GATCCAACCACCCAACGCCCCGGCCCCTTCTCATAAGAAAAAAAATGAAGCTTGCCATTTCGCTCAGGGCCCTGCAGCGGCGGCAGCTGGCGGGAGAGAGGCTTGGGACTGGGCCGCCCGGCCGCGAGGAATAAACTCACTCCTGTCTTCATACGTATCCATAGCCGGCAGGCGGCAGTACCTGTATGTGGTTTTAGCTATACGCGACCTCAGTTCGGGCGCAAGCTACAACCCCGACCAGGCGAGAAGAAGCATCGATAGTGTGACGAGCTAACCCACCACCAGCAACGTAATCCAAATCCATGGACAACCAGCCGCTGCCCTACTCCACAGGCCAGCCCCCTGCCCCCGGAGGAGCCCCGGTGGCGGGCATGCCTGGCGCGGCCGGCCTCCCACCCGTGCCGCACCACCACCTGCTCCAGCAGCAGCAGGCCCAGCTGCAGGCGTTCTGGGCGTACCAGCGCCAGGAGGCGGAGCGCGCGTCCGCGTCGGACTTCAAGAACCACCAGCTGCCTCTGGCCCGGATCAAGAAGATCATGAAGGCCGACGAGGACGTGCGCATGATCTCCGCCGAGGCGCCCGTGCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTGCAGCGCAACGACGTCGCCGCGGCCATCGCGCGCACCGACGTCTTCGATTTCCTCGTCGACATCGTGCCCCGCGAGGAGGCCAAGGAGGAGCCCGGCAGCGCCCTCGGCTTCGCGGCCTGGCATGTTCCGGCCTGGGACCCGGCCTGGCAGCAAGGGGCAGCGGATGTCGATCAGAGCGGCAGCTTCAGCGAGGAAGGACAAGGGTTTGGAGCAGGCCATGGCGGCGCCGCTAGCTTCCCTCCTGCGCCTCCGACCTCCGAGTGATCGATCGGCGCGTCTCTTGGTCCTGGCCTCCTGGCTTAGCTACATGTGCATGATGTCAATCGTTCAATGTGCCATGCTGTGTATACTCTACAGCAAACGTGGTAATGGAGCTGCTATGCATACAGAACGAATAAGGCGTGACGTGTGAGACCGTAAGAGTACGTAGTACTAATATGTAGATGCACGTGACGTGCCAATTAATCAAAGATTAACATGCAGTTAATTAATTAGTCCTCCTACCGAGGTGCCTCAAATCTATATTTTTTTTCCATTTATATATCGAGTTCACACAATCCATAAGAATACAAACTTCGGCAAGGTTTAGGATTTGGGGAACTTGAGGCTTGGGGAGTTAGGGTTCCATGGCTACCGGTCGTGATGACACATGGGGCATCAAGGTAGATTAAGGGTCTGTTTGTTTGAACTTTTAGAGTTTTTTTGAAAAGTTGTTGTTGAACTTTTGATACTGAGAAGCCAATTCAACGATGTTATTAGTTCCTAAATTAAGGAAGC - >Zm00001eb010770_T002
GATCCAACCACCCAACGCCCCGGCCCCTTCTCATAAGAAAAAAAATGAAGCTTGCCATTTCGCTCAGGGCCCTGCAGCGGCGGCAGCTGGCGGGAGAGAGGCTTGGGACTGGGCCGCCCGGCCGCGAGGAATAAACTCACTCCTGTCTTCATACGTATCCATAGCCGGCAGGCGGCAGTACCTGTATGTGGTTTTAGCTATACGCGACCTCAGTTCGGGCGCAAGCTACAACCCCGACCAGGCGAGAAGAAGCATCGATAGTGTGACGAGCTAACCCACCACCAGCAACGTAATCCAAATCCATGGACAACCAGCCGCTGCCCTACTCCACAGGCCAGCCCCCTGCCCCCGGAGGAGCCCCGGTGGCGGGCATGCCTGGCGCGGCCGGCCTCCCACCCGTGCCGCACCACCACCTGCTCCAGCAGCAGCAGGCCCAGCTGCAGGCGTTCTGGGCGTACCAGCGCCAGGAGGCGGAGCGCGCGTCCGCGTCGGACTTCAAGAACCACCAGCTGCCTCTGGCCCGGATCAAGAAGATCATGAAGGCCGACGAGGACGTGCGCATGATCTCCGCCGAGGCGCCCGTGCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTGCAGCGCAACGACGTCGCCGCGGCCATCGCGCGCACCGACGTCTTCGATTTCCTCGTCGACATCGTGCCCCGCGAGGAGGCCAAGGAGGAGCCCGGCAGCGCCCTCGGCTTCGCGGCCTGGCATGTTCCGGCCTGGGACCCGGCCTGGCAGCAAGGGGCAGCGGATGTCGATCAGAGCGGCAGCTTCAGCGAGGAAGGACAAGGGTTTGGAGCAGGCCATGGCGGCGCCGCTAGCTTCCCTCCTGCGCCTCCGACCTCCGAGTGATCGATCGGCGCGTCTCTTGGTCCTGGCCTCCTGGCTTAGCTACATGTGCATGATGTCAATCGTTCAATGTGCCATGCTGTGTATACTCTACAGCAAACGTGGTAATGGAGCTGCTATGCATACAGAACGAATAAGGCGTGACGTGTGAGACCGTAAGAGTACGTAGTACTAATATGTAGATGCACGTGACGTGCCAATTAATCAAAGATTAACATGCAGTTAATTAATTAGTCCTCCTACCGAGGTGCCTCAAATCTATATTTTTTTTCCATTTATATATCGAGTTCACACAATCCATAAGAATACAAACTTCGGCAAGGTTTAGGATTTGGGGAACTTGAGGCTTGGGGAGTTAGGGTTCCATGGCTACCGGTCGTGATGACACATGGGGCATCAAGGTAGATTAAGGGTCTGTTTGTTTGAACTTTTAGAGTTTTTTTGAAAAGTTGTTGTTGAACTTTTGATACTGAGAAGCCAATTCAACGATGTTATTAGTTCCTAAATTAAGGAAGC
CDS Sequence
- >Zm00001eb010770_T001
ATGGACAACCAGCCGCTGCCCTACTCCACAGGCCAGCCCCCTGCCCCCGGAGGAGCCCCGGTGGCGGGCATGCCTGGCGCGGCCGGCCTCCCACCCGTGCCGCACCACCACCTGCTCCAGCAGCAGCAGGCCCAGCTGCAGGCGTTCTGGGCGTACCAGCGCCAGGAGGCGGAGCGCGCGTCCGCGTCGGACTTCAAGAACCACCAGCTGCCTCTGGCCCGGATCAAGAAGATCATGAAGGCCGACGAGGACGTGCGCATGATCTCCGCCGAGGCGCCCGTGCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTGCAGCGCAACGACGTCGCCGCGGCCATCGCGCGCACCGACGTCTTCGATTTCCTCGTCGACATCGTGCCCCGCGAGGAGGCCAAGGAGGAGCCCGGCAGCGCCCTCGGCTTCGCGGCCTGGCATGTTCCGGCCTGGGACCCGGCCTGGCAGCAAGGGGCAGCGGATGTCGATCAGAGCGGCAGCTTCAGCGAGGAAGGACAAGGGTTTGGAGCAGGCCATGGCGGCGCCGCTAGCTTCCCTCCTGCGCCTCCGACCTCCGAGTGA - >Zm00001eb010770_T002
ATGGACAACCAGCCGCTGCCCTACTCCACAGGCCAGCCCCCTGCCCCCGGAGGAGCCCCGGTGGCGGGCATGCCTGGCGCGGCCGGCCTCCCACCCGTGCCGCACCACCACCTGCTCCAGCAGCAGCAGGCCCAGCTGCAGGCGTTCTGGGCGTACCAGCGCCAGGAGGCGGAGCGCGCGTCCGCGTCGGACTTCAAGAACCACCAGCTGCCTCTGGCCCGGATCAAGAAGATCATGAAGGCCGACGAGGACGTGCGCATGATCTCCGCCGAGGCGCCCGTGCTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTGCAGCGCAACGACGTCGCCGCGGCCATCGCGCGCACCGACGTCTTCGATTTCCTCGTCGACATCGTGCCCCGCGAGGAGGCCAAGGAGGAGCCCGGCAGCGCCCTCGGCTTCGCGGCCTGGCATGTTCCGGCCTGGGACCCGGCCTGGCAGCAAGGGGCAGCGGATGTCGATCAGAGCGGCAGCTTCAGCGAGGAAGGACAAGGGTTTGGAGCAGGCCATGGCGGCGCCGCTAGCTTCCCTCCTGCGCCTCCGACCTCCGAGTGA
Protein Sequence
- >Zm00001eb010770_P001
MDNQPLPYSTGQPPAPGGAPVAGMPGAAGLPPVPHHHLLQQQQAQLQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAKEEPGSALGFAAWHVPAWDPAWQQGAADVDQSGSFSEEGQGFGAGHGGAASFPPAPPTSE - >Zm00001eb010770_P002
MDNQPLPYSTGQPPAPGGAPVAGMPGAAGLPPVPHHHLLQQQQAQLQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAKEEPGSALGFAAWHVPAWDPAWQQGAADVDQSGSFSEEGQGFGAGHGGAASFPPAPPTSE
Source: Genetic information comes from the article