Information report for Zm.ov1;H2B
Gene Details
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Functional Descriptions
- The cDNA clones Zm.ov5 and Zm.ov1 showed homology to histones H2A and H2B, respectively, and computer alignments of the putative amino acid sequences of these two clones showed that they represent expressed variants of histones H2A and H2B.
- H2B cDNA from unfertilized maize ovule, similar to histone 2B, distinct from previous sequences reported.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC542301
- UniProt accessions: A0A3L6EX70 , B4FE18
- EMBL: BT035356 , CM000780
- AlphaFoldDB: B4FE18
- KEGG: zma:542301
- OMA: RITIEAC
- InterPro: IPR000558 , IPR007125 , IPR009072 , IPR055333
- PANTHER: PTHR23428
- SUPFAM: SSF47113
- PROSITE: PS00357
- Gene3D: 1.10.20.10
- OrthoDB: B4FE18
- SMR: B4FE18
- CDD: cd22910
Sequences
cDNA Sequence
- >Zm00001eb188570_T003
TTCTCATCGCAGAAATCCTCCGCAACTTCACAGCGTATCATCGTTTTCCATCGCTCCTACTCCTATCATCCAGAAAATCTGAGCGGTATTGATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAGCCGCCTTGTTGTAGGCGTCGTTGTTGTCTGCTTCTCAAGCAAGCACTGTCATGTGCCGCTTCTCATGGCAGTAGTGGTGGTTGGCTGGTGTGTGTAAGTGGTGCAGTGGCTTTTGCCTGTGTTATGAATTTAGTCATGGTGGTAATGTATTGCTATGGTTATTTGAATGTTGATCAGTGATCTTATGTCCGCCTACCATATATGTCAGTTGTTAATCTTGTTAGGTCTTATTCGGTTA - >Zm00001eb188570_T002
TTCTCATCGCAGAAATCCTCCGCAACTTCACAGCGTATCATCGTTTTCCATCGCTCCTACTCCTATCATCCAGAAAATCTGAGCGGTATTGATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAGCCGCCTTGTTGTAGGCGTCGTTGTTGTCTGCTTCTCAAGCAAGCACTGTCATGTGCCGCTTCTCATGGCAGTAGTGGTGGTTGGCTGGTGTGTGTAAGTGGTGCAGTGGCTTTTGCCTGTGTTATGAATTTAGTCATGGTGGTAATGTATTGCTATGGTTATTTGAATGTTGATCAGTGATCTTATGTCCGCCTACCATATATGTCAGTTGTTAATCTTGTTAGGTCTTATTCGGTTA - >Zm00001eb188570_T004
TTCTCATCGCAGAAATCCTCCGCAACTTCACAGCGTATCATCGTTTTCCATCGCTCCTACTCCTATCATCCAGAAAATCTGAGCGGTATTGATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAGCCGCCTTGTTGTAGGCGTCGTTGTTGTCTGCTTCTCAAGCAAGCACTGTCATGTGCCGCTTCTCATGGCAGTAGTGGTGGTTGGCTGGTGTGTGTAAGTGGTGCAGTGGCTTTTGCCTGTGTTATGAATTTAGTCATGGTGGTAATGTATTGCTATGGTTATTTGAATGTTGATCAGTGATCTTATGTCCGCCTACCATATATGTCAGTTGTTAATCTTGTTAGGTCTTATTCGGTTA - >Zm00001eb188570_T001
TTCTCATCGCAGAAATCCTCCGCAACTTCACAGCGTATCATCGTTTTCCATCGCTCCTACTCCTATCATCCAGAAAATCTGAGCGGTATTGATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAGCCGCCTTGTTGTAGGCGTCGTTGTTGTCTGCTTCTCAAGCAAGCACTGTCATGTGCCGCTTCTCATGGCAGTAGTGGTGGTTGGCTGGTGTGTGTAAGTGGTGCAGTGGCTTTTGCCTGTGTTATGAATTTAGTCATGGTGGTAATGTATTGCTATGGTTATTTGAATGTTGATCAGTGATCTTATGTCCGCCTACCATATATGTCAGTTGTTAATCTTGTTAGGTCTTATTCGGTTA
CDS Sequence
- >Zm00001eb188570_T003
ATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAG - >Zm00001eb188570_T002
ATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAG - >Zm00001eb188570_T004
ATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAG - >Zm00001eb188570_T001
ATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGGCGGCTCCGGCGGAGAAGGCCCCCGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTACCTGCGGGCAAGTCCGCCGGCAAGGAGGGCGGCGACAAGAAGGGTAGGAAGAAGGCGAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCCAAGCTCGCCCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCGGAGGGTACCAAGGCCGTCACCAAGTTCACCTCGTCTTAG
Protein Sequence
- >Zm00001eb188570_P003
MAPKAEKKPAAKKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS - >Zm00001eb188570_P002
MAPKAEKKPAAKKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS - >Zm00001eb188570_P004
MAPKAEKKPAAKKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS - >Zm00001eb188570_P001
MAPKAEKKPAAKKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS