Gene Details:

Functional Descriptions:

  • Yellow stripe 1 (ys1) and YS3 are recessive mutants of maize (Zea mays L.) that result in symptoms typical of Fe deficiency, i.e., interveinal chlorosis of the leaves.
  • The homozygous seeds of Yellow stripe 1 (ys1) and YS3 mutant plants were used to identify the genes responsible for the ys1 and YS3 phenotypes, and to extend our understanding of Fe homeostasis in maize.
  • In agreement with previous reports, the expression level of YS1 was decreased in the ys1 mutant. Moreover, we identified that the expression level of a homolog of tom1 in maize (Zmtom1) was significantly decreased in the ys3 mutant.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb133440_T002
    TGTGTGTGTGCTGCTAAACCACCAAGGTCGAAGTATCCCTTACTGCTTGGTATACGTACGAGTAGCGTGTCCCTGTCCATTGTACGTACGTCGATGGCTGAGGAGGTGCCAACGACGCCGCCGCCGGCACCATTGTACGTCGATGGCTGTCCGGGATGCGCCATGGACCGGAAGAAGGCGGCCAACAAGGGCATCCCCTACAAGGAGTTCTTCTTCGTCGCAGTCACCACCATTGCCTCTGCTTTGCCAATATCGTCCCTGTTTCCCTTCTTGTATTTCATGATCGAAGATCTACACGTGGCCAAAAAAGAACAAGATATTGGACTGTACGCTGGTTTTCTTGGTGCATCTTACTTTGTCGGTCGATTTTTGGTCTCGTTCTTCTGGGGTGTGGTGGCTGATCGTGTCGGAAGGAAGCCCATCATTATATTTTCAGTCGCTTCAGTGGTTGTATTCAACACACTGTTTGGATTAAGTGTACAATATTGGATGGCCATCACCACAAGATTGCTTCTAGGTGCTCTCAATGGCATGCTTGCACCAATAAAGGCTTACTCAATCGAGATTTGTCGACCTGAGCACCATGCTCTTGGGTTATCAGTTGTAAGCACGGCTTGGGGCCTAGGTCTTATTGTTGGCCCGTCCATTGGAGGCTACTTGGCGCAGCCTGCACGGCAATATCCAAACGTATTCTCTGAGGAATCGATTTTTGGGAGGTTCCCGTATCTGCTGCCATGCCTAAGTATCTCCATTTTTTCTGCTGTCGTTCTAGTAAGCTGCATATGGTTACCGGAGACACTCCATAAACATAAGAATATAGACAACGAAGTAGAAATGTCCGGACACTCAAGGACTCCACAAACAGAAGACGTAGATGCAGGCAAGAGTCTATATAAGAACTGGCCATTGATGTCTTCCATCATTGCGTACTGTGTTTTCACGCTTCATGACACTGCATACACCGAGATACTTTCCTTGTGGACCGTAAGTGACAAAAAGTATGGTGGGCTAGGCTTTTCTTCTAAGGGAGTTGGTCAACTTCTTGCGATTGCAGGTCTTGGGCTTATTGTGTATCAAATGTTCATCTACAGGCCAGTCCACAGATATCTCGGAAGTGTAAATTCATGCCGTGCTGCATCTGCGCTATCCATACCACTTATCGCTGCTTTTCCCTTCATGACACACCTGTCAGGATCAAAACTTGGACTAGCTCTTTATTTTGCTACTATTTTGAAAGCTGCTCTTGGGATAACTATCCTGACAGGCACTTCACTTCTGCAGAACTATGCTGTGCCACAGCATCAAAGAGGCGCCGCAAACGGCGTAGCGGCGACTGCAATGTCCTTCTTTAAGGCTATTGGACCTGCAGGAGCAGGCGCTTTATTCTCATGGACCCAAAAACGCCAAGATGCTGCCTTCTTTCCAGGGGATCACATGTTGTTCTTCATTCTGAATTTGGTCCAATGTATTGGGCTCGTGCTGACCCTTAAACCATTCCTAGCAGTACCGAAACACTATAAATGACAGCTGCTCGAACCCAAGCAATGGAATAATGATGGATTAGCAAAACATATGTGCCCAAAAATACGTTTTTGAGTGGCATACAACGGAATTATGTAAAAGCTGTCAAGAAAAAGTAGCTACAATGATTGTGTCCGCTATCTTTACATCTCCTTACATTGAAGTTTTAATTTGAGCA
  • >Zm00001eb133440_T001
    TGTGTGTGTGCTGCTAAACCACCAAGGTCGAAGTATCCCTTACTGCTTGGTATACGTACGAGTAGCGTGTCCCTGTCCATTGTACGTACGTCGATGGCTGAGGAGGTGCCAACGACGCCGCCGCCGGCACCATTGTACGTCGATGGCTGTCCGGGATGCGCCATGGACCGGAAGAAGGCGGCCAACAAGGGCATCCCCTACAAGGAGTTCTTCTTCGTCGCAGTCACCACCATTGCCTCTGCTTTGCCAATATCGTCCCTGTTTCCCTTCTTGTATTTCATGATCGAAGATCTACACGTGGCCAAAAAAGAACAAGATATTGGACTGTACGCTGGTTTTCTTGGTGCATCTTACTTTGTCGGTCGATTTTTGGTCTCGTTCTTCTGGGGTGTGGTGGCTGATCGTGTCGGAAGGAAGCCCATCATTATATTTTCAGTCGCTTCAGTGGTTGTATTCAACACACTGTTTGGATTAAGTGTACAATATTGGATGGCCATCACCACAAGATTGCTTCTAGGTGCTCTCAATGGCATGCTTGCACCAATAAAGGCTTACTCAATCGAGATTTGTCGACCTGAGCACCATGCTCTTGGGTTATCAGTTGTAAGCACGGCTTGGGGCCTAGGTCTTATTGTTGGCCCGTCCATTGGAGGCTACTTGGCGCAGCCTGCACGGCAATATCCAAACGTATTCTCTGAGGAATCGATTTTTGGGAGGTTCCCGTATCTGCTGCCATGCCTAAGTATCTCCATTTTTTCTGCTGTCGTTCTAGTAAGCTGCATATGGTTACCGGAGACACTCCATAAACATAAGAATATAGACAACGAAGTAGAAATGTCCGGACACTCAAGGACTCCACAAACAGAAGACGTAGATGCAGGCAAGAGTCTATATAAGAACTGGCCATTGATGTCTTCCATCATTGCGTACTGTGTTTTCACGCTTCATGACACTGCATACACCGAGATACTTTCCTTGTGGACCGTAAGTGACAAAAAGTATGGTGGGCTAGGCTTTTCTTCTAAGGGAGTTGGTCAACTTCTTGCGATTGCAGGTCTTGGGCTTATTGTGTATCAAATGTTCATCTACAGGCCAGTCCACAGATATCTCGGAAGTGTAAATTCATGCCGTGCTGCATCTGCGCTATCCATACCACTTATCGCTGCTTTTCCCTTCATGACACACCTGTCAGGATCAAAACTTGGACTAGCTCTTTATTTTGCTACTATTTTGAAAGCTGCTCTTGGGATAACTATCCTGACAGGCACTTCACTTCTGCAGAACTATGCTGTGCCACAGCATCAAAGAGGCGCCGCAAACGGCGTAGCGGCGACTGCAATGTCCTTCTTTAAGGCTATTGGACCTGCAGGAGCAGGCGCTTTATTCTCATGGACCCAAAAACGCCAAGATGCTGCCTTCTTTCCAGGGGATCACATGTTGTTCTTCATTCTGAATTTGGTCCAATGTATTGGGCTCGTGCTGACCCTTAAACCATTCCTAGCAGTACCGAAACACTATAAATGACAGCTGCTCGAACCCAAGCAATGGAATAATGATGGATTAGCAAAACATATGTGCCCAAAAATACGTTTTTGAGTGGCATACAACGGAATTATGTAAAAGCTGTCAAGAAAAAGTAGCTACAATGATTGTGTCCGCTATCTTTACATCTCCTTACATTGAAGTTTTAATTTGAGCA
CDS Sequence
  • >Zm00001eb133440_T002
    ATGGCTGAGGAGGTGCCAACGACGCCGCCGCCGGCACCATTGTACGTCGATGGCTGTCCGGGATGCGCCATGGACCGGAAGAAGGCGGCCAACAAGGGCATCCCCTACAAGGAGTTCTTCTTCGTCGCAGTCACCACCATTGCCTCTGCTTTGCCAATATCGTCCCTGTTTCCCTTCTTGTATTTCATGATCGAAGATCTACACGTGGCCAAAAAAGAACAAGATATTGGACTGTACGCTGGTTTTCTTGGTGCATCTTACTTTGTCGGTCGATTTTTGGTCTCGTTCTTCTGGGGTGTGGTGGCTGATCGTGTCGGAAGGAAGCCCATCATTATATTTTCAGTCGCTTCAGTGGTTGTATTCAACACACTGTTTGGATTAAGTGTACAATATTGGATGGCCATCACCACAAGATTGCTTCTAGGTGCTCTCAATGGCATGCTTGCACCAATAAAGGCTTACTCAATCGAGATTTGTCGACCTGAGCACCATGCTCTTGGGTTATCAGTTGTAAGCACGGCTTGGGGCCTAGGTCTTATTGTTGGCCCGTCCATTGGAGGCTACTTGGCGCAGCCTGCACGGCAATATCCAAACGTATTCTCTGAGGAATCGATTTTTGGGAGGTTCCCGTATCTGCTGCCATGCCTAAGTATCTCCATTTTTTCTGCTGTCGTTCTAGTAAGCTGCATATGGTTACCGGAGACACTCCATAAACATAAGAATATAGACAACGAAGTAGAAATGTCCGGACACTCAAGGACTCCACAAACAGAAGACGTAGATGCAGGCAAGAGTCTATATAAGAACTGGCCATTGATGTCTTCCATCATTGCGTACTGTGTTTTCACGCTTCATGACACTGCATACACCGAGATACTTTCCTTGTGGACCGTAAGTGACAAAAAGTATGGTGGGCTAGGCTTTTCTTCTAAGGGAGTTGGTCAACTTCTTGCGATTGCAGGTCTTGGGCTTATTGTGTATCAAATGTTCATCTACAGGCCAGTCCACAGATATCTCGGAAGTGTAAATTCATGCCGTGCTGCATCTGCGCTATCCATACCACTTATCGCTGCTTTTCCCTTCATGACACACCTGTCAGGATCAAAACTTGGACTAGCTCTTTATTTTGCTACTATTTTGAAAGCTGCTCTTGGGATAACTATCCTGACAGGCACTTCACTTCTGCAGAACTATGCTGTGCCACAGCATCAAAGAGGCGCCGCAAACGGCGTAGCGGCGACTGCAATGTCCTTCTTTAAGGCTATTGGACCTGCAGGAGCAGGCGCTTTATTCTCATGGACCCAAAAACGCCAAGATGCTGCCTTCTTTCCAGGGGATCACATGTTGTTCTTCATTCTGAATTTGGTCCAATGTATTGGGCTCGTGCTGACCCTTAAACCATTCCTAGCAGTACCGAAACACTATAAATGA
  • >Zm00001eb133440_T001
    ATGGCTGAGGAGGTGCCAACGACGCCGCCGCCGGCACCATTGTACGTCGATGGCTGTCCGGGATGCGCCATGGACCGGAAGAAGGCGGCCAACAAGGGCATCCCCTACAAGGAGTTCTTCTTCGTCGCAGTCACCACCATTGCCTCTGCTTTGCCAATATCGTCCCTGTTTCCCTTCTTGTATTTCATGATCGAAGATCTACACGTGGCCAAAAAAGAACAAGATATTGGACTGTACGCTGGTTTTCTTGGTGCATCTTACTTTGTCGGTCGATTTTTGGTCTCGTTCTTCTGGGGTGTGGTGGCTGATCGTGTCGGAAGGAAGCCCATCATTATATTTTCAGTCGCTTCAGTGGTTGTATTCAACACACTGTTTGGATTAAGTGTACAATATTGGATGGCCATCACCACAAGATTGCTTCTAGGTGCTCTCAATGGCATGCTTGCACCAATAAAGGCTTACTCAATCGAGATTTGTCGACCTGAGCACCATGCTCTTGGGTTATCAGTTGTAAGCACGGCTTGGGGCCTAGGTCTTATTGTTGGCCCGTCCATTGGAGGCTACTTGGCGCAGCCTGCACGGCAATATCCAAACGTATTCTCTGAGGAATCGATTTTTGGGAGGTTCCCGTATCTGCTGCCATGCCTAAGTATCTCCATTTTTTCTGCTGTCGTTCTAGTAAGCTGCATATGGTTACCGGAGACACTCCATAAACATAAGAATATAGACAACGAAGTAGAAATGTCCGGACACTCAAGGACTCCACAAACAGAAGACGTAGATGCAGGCAAGAGTCTATATAAGAACTGGCCATTGATGTCTTCCATCATTGCGTACTGTGTTTTCACGCTTCATGACACTGCATACACCGAGATACTTTCCTTGTGGACCGTAAGTGACAAAAAGTATGGTGGGCTAGGCTTTTCTTCTAAGGGAGTTGGTCAACTTCTTGCGATTGCAGGTCTTGGGCTTATTGTGTATCAAATGTTCATCTACAGGCCAGTCCACAGATATCTCGGAAGTGTAAATTCATGCCGTGCTGCATCTGCGCTATCCATACCACTTATCGCTGCTTTTCCCTTCATGACACACCTGTCAGGATCAAAACTTGGACTAGCTCTTTATTTTGCTACTATTTTGAAAGCTGCTCTTGGGATAACTATCCTGACAGGCACTTCACTTCTGCAGAACTATGCTGTGCCACAGCATCAAAGAGGCGCCGCAAACGGCGTAGCGGCGACTGCAATGTCCTTCTTTAAGGCTATTGGACCTGCAGGAGCAGGCGCTTTATTCTCATGGACCCAAAAACGCCAAGATGCTGCCTTCTTTCCAGGGGATCACATGTTGTTCTTCATTCTGAATTTGGTCCAATGTATTGGGCTCGTGCTGACCCTTAAACCATTCCTAGCAGTACCGAAACACTATAAATGA
Protein Sequence
  • >Zm00001eb133440_P002
    MAEEVPTTPPPAPLYVDGCPGCAMDRKKAANKGIPYKEFFFVAVTTIASALPISSLFPFLYFMIEDLHVAKKEQDIGLYAGFLGASYFVGRFLVSFFWGVVADRVGRKPIIIFSVASVVVFNTLFGLSVQYWMAITTRLLLGALNGMLAPIKAYSIEICRPEHHALGLSVVSTAWGLGLIVGPSIGGYLAQPARQYPNVFSEESIFGRFPYLLPCLSISIFSAVVLVSCIWLPETLHKHKNIDNEVEMSGHSRTPQTEDVDAGKSLYKNWPLMSSIIAYCVFTLHDTAYTEILSLWTVSDKKYGGLGFSSKGVGQLLAIAGLGLIVYQMFIYRPVHRYLGSVNSCRAASALSIPLIAAFPFMTHLSGSKLGLALYFATILKAALGITILTGTSLLQNYAVPQHQRGAANGVAATAMSFFKAIGPAGAGALFSWTQKRQDAAFFPGDHMLFFILNLVQCIGLVLTLKPFLAVPKHYK
  • >Zm00001eb133440_P001
    MAEEVPTTPPPAPLYVDGCPGCAMDRKKAANKGIPYKEFFFVAVTTIASALPISSLFPFLYFMIEDLHVAKKEQDIGLYAGFLGASYFVGRFLVSFFWGVVADRVGRKPIIIFSVASVVVFNTLFGLSVQYWMAITTRLLLGALNGMLAPIKAYSIEICRPEHHALGLSVVSTAWGLGLIVGPSIGGYLAQPARQYPNVFSEESIFGRFPYLLPCLSISIFSAVVLVSCIWLPETLHKHKNIDNEVEMSGHSRTPQTEDVDAGKSLYKNWPLMSSIIAYCVFTLHDTAYTEILSLWTVSDKKYGGLGFSSKGVGQLLAIAGLGLIVYQMFIYRPVHRYLGSVNSCRAASALSIPLIAAFPFMTHLSGSKLGLALYFATILKAALGITILTGTSLLQNYAVPQHQRGAANGVAATAMSFFKAIGPAGAGALFSWTQKRQDAAFFPGDHMLFFILNLVQCIGLVLTLKPFLAVPKHYK

Source: Genetic information comes from the article