Gene Details:
- Gene ID: Zm00001eb361490
- Gene Symbol: Vde3
- Gene Name: violaxanthin de-epoxidase3
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Violaxanthin de-epoxidase (VDE) has a critical role in the carotenoid biosynthesis pathway.
- Genetic Diversity and Molecular Evolution of a Violaxanthin De-epoxidase Gene in Maize.
- Vde3 is similar to S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein of A. thaliana.
Function-related keywords:
Literature:
- Genetic Diversity and Molecular Evolution of a Violaxanthin De-epoxidase Gene in Maize DOI: 10.3389/fgene.2016.00131 ; PMID:
Related News:
Gene Resources:
- NCBI ID: LOC100381876
- UniProt accessions: C0P2H1
Sequences:
cDNA Sequence
- >Zm00001eb361490_T002
GTCGATGGCAGCTACCTTAACACCAAAGAAGAGTTCGACTAGTTGAACTCGAAAGCTCGAGGCCCAGGCGACGCGACGCGGCCACGCCCACGTCCTTCCATGGCGACCGCTCTCCCCGCCTCCGCCTCCGCCGCTTGCCTTCTCCAGCTCTCCCGGCGCGGTCTCCCTGGAACATCTTCTGTGCTCTCCCCGCTTCGCACCGCCACTTTCCGCTGGCACGGTGCCTGTAACGTGGCCTGTTCATGCTCTCCCGGCCCCCGGCCGGCGGTTCCCGCGGAGCGAAGGGACGGCGTCGCTGGCCATGCCACTTCTCCAGAGGGAACTGTACGAATCGTCGCCGTGGTTGGAGAAGGTAGCATCAGCCCGATTAAGGACGCGCCCTGGGAAGAGGTCATGCGCCACACGGCTGATAGGCTGAAGTGGGTCGATGAAGGATTTGAAATGCTTGTCTTCACGGATAATTTGGTTGGTCATGATAACCTCAGGAAAGAGTTACTATCACACTGTGATATGCTAGTCAATGTTGCAATAACAAATCAGGATGCTGTTCAGTGGCTTATAAACAACAGCAAACACATTTCTAATGTAATTTGCTTTCAGTCATCTCCGTCTTTAGTAAACAAACTAGGTGGCACATATGTTCAGTACACTGGAGAGCAGGACATGTTTGGGAAGCTAACAAGTATTGGAAAACCAAGTGGCATAGAGGAATCAACTGAAGTTATGAAGACCATATCTAATGCTTGGGAAAGACACAATTCAGATGACATTAGATTTTGCTTGCTTGTTGTTGTAAATGCATACATAAGACCGGTTGCTATGCTGAAAAATCTAAGGGCAAAAGGCCTTTCTACCCTAACTTGCATGATAAAGAACTGTGGTCCTCAGATACTCAATTGTCTGTTTGACCCTAACTGTAGGAAGGCCCTTCAGTGTTTGAATTCCTGTTCTCCAACTGATCAAGTCTGCAACTATCGTTGCATTGCATCATATGAAAGTCCATATCTGGAGGCTTTTTCCCTCTGTGTTTTGCAGAAGAACAATTGCCTTGACCTCAATGCTGAGATACCCAGTAAACCGAATGTAATGCCACTAACCATGTTCAGAGAACAAAAACTAAGCCATGAAATAGCGGAAGATCTTTTTGTTGGTTGGTTGGACAGCATGGAATGGAGTTGGCGAGTGGCAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTACCAGTTATTTTACAGAGGGAAAGCTAAAGGTTCATTTTGGTATGAGCCGGTTTTTCAGGTCAAAACCCTGGAAGGGGAGCTGGTTTGGAGGCGCAGGAGGTATCGTGTGAGAAGGGCTAGCACTCCTGGTACATTTTACTTCAGTGTGTTGGATAATGGTGTCATTTCCAAAGAATATTGGACAATTGTTGACGTTGCGGAGGATTTCAGCTGGGGTCTGTTCCATTATCATGGCGCAGCACAAGCTGCTGGGCTATCATACACTGGAGCAGTGCTTGTTACTCCAGATGGGTCTTATCCTGACCTGGAAGACCCAAGATTGGCCTCTGCTTTAGAGAACTGTGCTATAAAGAAATGGGAGCTCTATACAGTCGATAACTGCTCCTGCATGGGTGCACCACTGGGAACTCCTGAGGGTTCAAAGCTGCACCATCAAATTTCTCCAGGAAAAGAAAGTAGTGTTTTGCAGAGAAGATGATAATCTGTAATATGTTAAAGTGACTCCCAAATGATTATGTCGTACGTACAAAGATGTACAGCCAAGTGGACATGTATTGCTGAAGAGAGCTCATATGTAACCTGCAGGTATATTTTCTTCTTTTGAATATACGTGTAACCTAATTCCTACCTTTTGTGGCTGCCATCAGGGTTTGATGATTAAGAAATAAAAAGTTTGAATACAAGATCGTCACTT - >Zm00001eb361490_T001
GTCGATGGCAGCTACCTTAACACCAAAGAAGAGTTCGACTAGTTGAACTCGAAAGCTCGAGGCCCAGGCGACGCGACGCGGCCACGCCCACGTCCTTCCATGGCGACCGCTCTCCCCGCCTCCGCCTCCGCCGCTTGCCTTCTCCAGCTCTCCCGGCGCGGTCTCCCTGGAACATCTTCTGTGCTCTCCCCGCTTCGCACCGCCACTTTCCGCTGGCACGGTGCCTGTAACGTGGCCTGTTCATGCTCTCCCGGCCCCCGGCCGGCGGTTCCCGCGGAGCGAAGGGACGGCGTCGCTGGCCATGCCACTTCTCCAGAGGGAACTGTACGAATCGTCGCCGTGGTTGGAGAAGGTAGCATCAGCCCGATTAAGGACGCGCCCTGGGAAGAGGTCATGCGCCACACGGCTGATAGGCTGAAGTGGGTCGATGAAGGATTTGAAATGCTTGTCTTCACGGATAATTTGGTTGGTCATGATAACCTCAGGAAAGAGTTACTATCACACTGTGATATGCTAGTCAATGTTGCAATAACAAATCAGGATGCTGTTCAGTGGCTTATAAACAACAGCAAACACATTTCTAATGTAATTTGCTTTCAGTCATCTCCGTCTTTAGTAAACAAACTAGGTGGCACATATGTTCAGTACACTGGAGAGCAGGACATGTTTGGGAAGCTAACAAGTATTGGAAAACCAAGTGGCATAGAGGAATCAACTGAAGTTATGAAGACCATATCTAATGCTTGGGAAAGACACAATTCAGATGACATTAGATTTTGCTTGCTTGTTGTTGTAAATGCATACATAAGACCGGTTGCTATGCTGAAAAATCTAAGGGCAAAAGGCCTTTCTACCCTAACTTGCATGATAAAGAACTGTGGTCCTCAGATACTCAATTGTCTGTTTGACCCTAACTGTAGGAAGGCCCTTCAGTGTTTGAATTCCTGTTCTCCAACTGATCAAGTCTGCAACTATCGTTGCATTGCATCATATGAAAGTCCATATCTGGAGGCTTTTTCCCTCTGTGTTTTGCAGAAGAACAATTGCCTTGACCTCAATGCTGAGATACCCAGTAAACCGAATGTAATGCCACTAACCATGTTCAGAGAACAAAAACTAAGCCATGAAATAGCGGAAGATCTTTTTGTTGGTTGGTTGGACAGCATGGAATGGAGTTGGCGAGTGGCAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTACCAGTTATTTTACAGAGGGAAAGCTAAAGGTTCATTTTGGTATGAGCCGGTTTTTCAGGTCAAAACCCTGGAAGGGGAGCTGGTTTGGAGGCGCAGGAGGTATCGTGTGAGAAGGGCTAGCACTCCTGGTACATTTTACTTCAGTGTGTTGGATAATGGTGTCATTTCCAAAGAATATTGGACAATTGTTGACGTTGCGGAGGATTTCAGCTGGGGTCTGTTCCATTATCATGGCGCAGCACAAGCTGCTGGGCTATCATACACTGGAGCAGTGCTTGTTACTCCAGATGGGTCTTATCCTGACCTGGAAGACCCAAGATTGGCCTCTGCTTTAGAGAACTGTGCTATAAAGAAATGGGAGCTCTATACAGTCGATAACTGCTCCTGCATGGGTGCACCACTGGGAACTCCTGAGGGTTCAAAGCTGCACCATCAAATTTCTCCAGGAAAAGAAAGTAGTGTTTTGCAGAGAAGATGATAATCTGTAATATGTTAAAGTGACTCCCAAATGATTATGTCGTACGTACAAAGATGTACAGCCAAGTGGACATGTATTGCTGAAGAGAGCTCATATGTAACCTGCAGGTATATTTTCTTCTTTTGAATATACGTGTAACCTAATTCCTACCTTTTGTGGCTGCCATCAGGGTTTGATGATTAAGAAATAAAAAGTTTGAATACAAGATCGTCACTT
CDS Sequence
- >Zm00001eb361490_T002
ATGGCGACCGCTCTCCCCGCCTCCGCCTCCGCCGCTTGCCTTCTCCAGCTCTCCCGGCGCGGTCTCCCTGGAACATCTTCTGTGCTCTCCCCGCTTCGCACCGCCACTTTCCGCTGGCACGGTGCCTGTAACGTGGCCTGTTCATGCTCTCCCGGCCCCCGGCCGGCGGTTCCCGCGGAGCGAAGGGACGGCGTCGCTGGCCATGCCACTTCTCCAGAGGGAACTGTACGAATCGTCGCCGTGGTTGGAGAAGGTAGCATCAGCCCGATTAAGGACGCGCCCTGGGAAGAGGTCATGCGCCACACGGCTGATAGGCTGAAGTGGGTCGATGAAGGATTTGAAATGCTTGTCTTCACGGATAATTTGGTTGGTCATGATAACCTCAGGAAAGAGTTACTATCACACTGTGATATGCTAGTCAATGTTGCAATAACAAATCAGGATGCTGTTCAGTGGCTTATAAACAACAGCAAACACATTTCTAATGTAATTTGCTTTCAGTCATCTCCGTCTTTAGTAAACAAACTAGGTGGCACATATGTTCAGTACACTGGAGAGCAGGACATGTTTGGGAAGCTAACAAGTATTGGAAAACCAAGTGGCATAGAGGAATCAACTGAAGTTATGAAGACCATATCTAATGCTTGGGAAAGACACAATTCAGATGACATTAGATTTTGCTTGCTTGTTGTTGTAAATGCATACATAAGACCGGTTGCTATGCTGAAAAATCTAAGGGCAAAAGGCCTTTCTACCCTAACTTGCATGATAAAGAACTGTGGTCCTCAGATACTCAATTGTCTGTTTGACCCTAACTGTAGGAAGGCCCTTCAGTGTTTGAATTCCTGTTCTCCAACTGATCAAGTCTGCAACTATCGTTGCATTGCATCATATGAAAGTCCATATCTGGAGGCTTTTTCCCTCTGTGTTTTGCAGAAGAACAATTGCCTTGACCTCAATGCTGAGATACCCAGTAAACCGAATGTAATGCCACTAACCATGTTCAGAGAACAAAAACTAAGCCATGAAATAGCGGAAGATCTTTTTGTTGGTTGGTTGGACAGCATGGAATGGAGTTGGCGAGTGGCAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTACCAGTTATTTTACAGAGGGAAAGCTAAAGGTTCATTTTGGTATGAGCCGGTTTTTCAGGTCAAAACCCTGGAAGGGGAGCTGGTTTGGAGGCGCAGGAGGTATCGTGTGAGAAGGGCTAGCACTCCTGGTACATTTTACTTCAGTGTGTTGGATAATGGTGTCATTTCCAAAGAATATTGGACAATTGTTGACGTTGCGGAGGATTTCAGCTGGGGTCTGTTCCATTATCATGGCGCAGCACAAGCTGCTGGGCTATCATACACTGGAGCAGTGCTTGTTACTCCAGATGGGTCTTATCCTGACCTGGAAGACCCAAGATTGGCCTCTGCTTTAGAGAACTGTGCTATAAAGAAATGGGAGCTCTATACAGTCGATAACTGCTCCTGCATGGGTGCACCACTGGGAACTCCTGAGGGTTCAAAGCTGCACCATCAAATTTCTCCAGGAAAAGAAAGTAGTGTTTTGCAGAGAAGATGA - >Zm00001eb361490_T001
ATGGCGACCGCTCTCCCCGCCTCCGCCTCCGCCGCTTGCCTTCTCCAGCTCTCCCGGCGCGGTCTCCCTGGAACATCTTCTGTGCTCTCCCCGCTTCGCACCGCCACTTTCCGCTGGCACGGTGCCTGTAACGTGGCCTGTTCATGCTCTCCCGGCCCCCGGCCGGCGGTTCCCGCGGAGCGAAGGGACGGCGTCGCTGGCCATGCCACTTCTCCAGAGGGAACTGTACGAATCGTCGCCGTGGTTGGAGAAGGTAGCATCAGCCCGATTAAGGACGCGCCCTGGGAAGAGGTCATGCGCCACACGGCTGATAGGCTGAAGTGGGTCGATGAAGGATTTGAAATGCTTGTCTTCACGGATAATTTGGTTGGTCATGATAACCTCAGGAAAGAGTTACTATCACACTGTGATATGCTAGTCAATGTTGCAATAACAAATCAGGATGCTGTTCAGTGGCTTATAAACAACAGCAAACACATTTCTAATGTAATTTGCTTTCAGTCATCTCCGTCTTTAGTAAACAAACTAGGTGGCACATATGTTCAGTACACTGGAGAGCAGGACATGTTTGGGAAGCTAACAAGTATTGGAAAACCAAGTGGCATAGAGGAATCAACTGAAGTTATGAAGACCATATCTAATGCTTGGGAAAGACACAATTCAGATGACATTAGATTTTGCTTGCTTGTTGTTGTAAATGCATACATAAGACCGGTTGCTATGCTGAAAAATCTAAGGGCAAAAGGCCTTTCTACCCTAACTTGCATGATAAAGAACTGTGGTCCTCAGATACTCAATTGTCTGTTTGACCCTAACTGTAGGAAGGCCCTTCAGTGTTTGAATTCCTGTTCTCCAACTGATCAAGTCTGCAACTATCGTTGCATTGCATCATATGAAAGTCCATATCTGGAGGCTTTTTCCCTCTGTGTTTTGCAGAAGAACAATTGCCTTGACCTCAATGCTGAGATACCCAGTAAACCGAATGTAATGCCACTAACCATGTTCAGAGAACAAAAACTAAGCCATGAAATAGCGGAAGATCTTTTTGTTGGTTGGTTGGACAGCATGGAATGGAGTTGGCGAGTGGCAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTACCAGTTATTTTACAGAGGGAAAGCTAAAGGTTCATTTTGGTATGAGCCGGTTTTTCAGGTCAAAACCCTGGAAGGGGAGCTGGTTTGGAGGCGCAGGAGGTATCGTGTGAGAAGGGCTAGCACTCCTGGTACATTTTACTTCAGTGTGTTGGATAATGGTGTCATTTCCAAAGAATATTGGACAATTGTTGACGTTGCGGAGGATTTCAGCTGGGGTCTGTTCCATTATCATGGCGCAGCACAAGCTGCTGGGCTATCATACACTGGAGCAGTGCTTGTTACTCCAGATGGGTCTTATCCTGACCTGGAAGACCCAAGATTGGCCTCTGCTTTAGAGAACTGTGCTATAAAGAAATGGGAGCTCTATACAGTCGATAACTGCTCCTGCATGGGTGCACCACTGGGAACTCCTGAGGGTTCAAAGCTGCACCATCAAATTTCTCCAGGAAAAGAAAGTAGTGTTTTGCAGAGAAGATGA
Protein Sequence
- >Zm00001eb361490_P002
MATALPASASAACLLQLSRRGLPGTSSVLSPLRTATFRWHGACNVACSCSPGPRPAVPAERRDGVAGHATSPEGTVRIVAVVGEGSISPIKDAPWEEVMRHTADRLKWVDEGFEMLVFTDNLVGHDNLRKELLSHCDMLVNVAITNQDAVQWLINNSKHISNVICFQSSPSLVNKLGGTYVQYTGEQDMFGKLTSIGKPSGIEESTEVMKTISNAWERHNSDDIRFCLLVVVNAYIRPVAMLKNLRAKGLSTLTCMIKNCGPQILNCLFDPNCRKALQCLNSCSPTDQVCNYRCIASYESPYLEAFSLCVLQKNNCLDLNAEIPSKPNVMPLTMFREQKLSHEIAEDLFVGWLDSMEWSWRVAAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVKTLEGELVWRRRRYRVRRASTPGTFYFSVLDNGVISKEYWTIVDVAEDFSWGLFHYHGAAQAAGLSYTGAVLVTPDGSYPDLEDPRLASALENCAIKKWELYTVDNCSCMGAPLGTPEGSKLHHQISPGKESSVLQRR - >Zm00001eb361490_P001
MATALPASASAACLLQLSRRGLPGTSSVLSPLRTATFRWHGACNVACSCSPGPRPAVPAERRDGVAGHATSPEGTVRIVAVVGEGSISPIKDAPWEEVMRHTADRLKWVDEGFEMLVFTDNLVGHDNLRKELLSHCDMLVNVAITNQDAVQWLINNSKHISNVICFQSSPSLVNKLGGTYVQYTGEQDMFGKLTSIGKPSGIEESTEVMKTISNAWERHNSDDIRFCLLVVVNAYIRPVAMLKNLRAKGLSTLTCMIKNCGPQILNCLFDPNCRKALQCLNSCSPTDQVCNYRCIASYESPYLEAFSLCVLQKNNCLDLNAEIPSKPNVMPLTMFREQKLSHEIAEDLFVGWLDSMEWSWRVAAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVKTLEGELVWRRRRYRVRRASTPGTFYFSVLDNGVISKEYWTIVDVAEDFSWGLFHYHGAAQAAGLSYTGAVLVTPDGSYPDLEDPRLASALENCAIKKWELYTVDNCSCMGAPLGTPEGSKLHHQISPGKESSVLQRR
Source: Genetic information comes from the article