Gene Details:
- Gene ID: Zm00001eb249040
- Gene Symbol: UBL1
- Gene Name: U6 biogenesis like1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The UBL1 mutant, exhibiting small kernel and weak seedling, was isolated from a Mutator-tagged population.
- Transgenic complementation and three independent mutant alleles confirmed that UBL1, which encodes a putative RNA exonuclease belonging to the 2H phosphodiesterase superfamily, is responsible for the phenotype of UBL1.
- The U6 Biogenesis-Like 1 Plays an Important Role in Maize Kernel and Seedling Development by Affecting the 3′ End Processing of U6 snRNA.
- UBL1 Encodes an RNA Exonuclease in Maize.
- Maize UBL1 gene influences the splicing of mRNA precursors and plays a key role in maize kernel and seedling development.
- UBL1 plays an important role in kernel and seedling development by influencing pre-mRNA splicing
Function-related keywords:
Literature:
- The U6 Biogenesis-Like 1 Plays an Important Role in Maize Kernel and Seedling Development by Affecting the 3' End Processing of U6 snRNA. DOI: 10.1016/j.molp.2016.10.016 ; PMID: 27825944
Related News:
Gene Resources:
- NCBI ID: LOC100275088
- UniProt accessions: B6SNB8
Sequences:
cDNA Sequence
- >Zm00001eb249040_T001
ATGTGCGAAATTGTGAATGACCACTGTGCCGACACCCTACGTCCAGCACCACTCTCCACGCCAGCGCCGCTACTCTCCGCCTGCGCCCCCGTGCCTCCCACCGGGCCACTTCGCTAGCGCCGCCCGCTGCAGCACTAGCCGTCGAGCGCGGCGCTCGCCGCCGACTTCTCACGCGGCCGCGTCGTCGACCCACGTCCCCACCGGCTGGGGTTCAACGGGAGAAGGAACCGATGGACGCGCTCATGGCGAGCTACGCGTCCGACACCGACTCTGACGGCGGCGAGTCTGCTTCCGTCTCTGGAGGCGCCCCGGAGGTCCCGGAACCTTCGGCCTTGCTCCCACCTCCTCCCCTCGACCTCCTCCAGCCCCCCAACTTCGTAGATTACTCGGCGATGGCGCAGGGGGGTCGCGTCCGGAGCTTCCCCCATGTGGAAGGCAACTATGCTGTACATGTTTATATCCCTGTCGTCATACCTTCTGATGCAAGGAAACAACTGGCTCTTTCTATGAAAAGAGCTGCATCTCTTGTGCCGGATCTCTATGCCGTTGATGCAGACTATGCGCTTTCTGAATTGTGCAAAGATGAACAGAAGCTTGAGAAAGTGCTTCTGAGCAGGGAGTTTCATGTAAGCTTGGGAAGACCTGTTGCAGTTCAGGTGCATCAGATTGACTCATTTATTGCAATGCTTCGCCAGAAGTTCCAGCCACAACAACAGTACTGGATGGAGTTCAATAAATGGGAGCACTTTGTCAATGATGATTGTACACGGTCATTTGTTTCACTAGAAGTTACAAGAACTGGTTTGCCAGAGATAACGAGGCAGATACTTATGGTAGATGAAGTGTATCGATTGCATGGTCTTCCTGAATTTTACACGAATCCACGGCCACATATATCGTTGGTGTGGGCATTGGGTGATGTCAGCGGCAAACTAAAGCAGGCACTAAAGGACATTGAAAAATATCAGAGCAGTATGAGCTCATTGCAAAAATGTAATGTTCGATGCAAGTTCAGTCGTGTAGTTTGTAAAGTAGGCAAGAAGGTGCATGATATCTGTAAAGTTGCAGATTGAAACACACATGAATTACGCTCGATAAGCTTCGAGGTACTGACCTCGTATGGTCTGGACCAATTCTTGTGATTGGAACAGTGAAACACAAATTCATTCTCTTCTTCAGTACATGGCAGTTACTGCTAACTTTTCCCATGCAAATTACGAAATGATAAAGAG
CDS Sequence
- >Zm00001eb249040_T001
ATGGACGCGCTCATGGCGAGCTACGCGTCCGACACCGACTCTGACGGCGGCGAGTCTGCTTCCGTCTCTGGAGGCGCCCCGGAGGTCCCGGAACCTTCGGCCTTGCTCCCACCTCCTCCCCTCGACCTCCTCCAGCCCCCCAACTTCGTAGATTACTCGGCGATGGCGCAGGGGGGTCGCGTCCGGAGCTTCCCCCATGTGGAAGGCAACTATGCTGTACATGTTTATATCCCTGTCGTCATACCTTCTGATGCAAGGAAACAACTGGCTCTTTCTATGAAAAGAGCTGCATCTCTTGTGCCGGATCTCTATGCCGTTGATGCAGACTATGCGCTTTCTGAATTGTGCAAAGATGAACAGAAGCTTGAGAAAGTGCTTCTGAGCAGGGAGTTTCATGTAAGCTTGGGAAGACCTGTTGCAGTTCAGGTGCATCAGATTGACTCATTTATTGCAATGCTTCGCCAGAAGTTCCAGCCACAACAACAGTACTGGATGGAGTTCAATAAATGGGAGCACTTTGTCAATGATGATTGTACACGGTCATTTGTTTCACTAGAAGTTACAAGAACTGGTTTGCCAGAGATAACGAGGCAGATACTTATGGTAGATGAAGTGTATCGATTGCATGGTCTTCCTGAATTTTACACGAATCCACGGCCACATATATCGTTGGTGTGGGCATTGGGTGATGTCAGCGGCAAACTAAAGCAGGCACTAAAGGACATTGAAAAATATCAGAGCAGTATGAGCTCATTGCAAAAATGTAATGTTCGATGCAAGTTCAGTCGTGTAGTTTGTAAAGTAGGCAAGAAGGTGCATGATATCTGTAAAGTTGCAGATTGA
Protein Sequence
- >Zm00001eb249040_P001
MDALMASYASDTDSDGGESASVSGGAPEVPEPSALLPPPPLDLLQPPNFVDYSAMAQGGRVRSFPHVEGNYAVHVYIPVVIPSDARKQLALSMKRAASLVPDLYAVDADYALSELCKDEQKLEKVLLSREFHVSLGRPVAVQVHQIDSFIAMLRQKFQPQQQYWMEFNKWEHFVNDDCTRSFVSLEVTRTGLPEITRQILMVDEVYRLHGLPEFYTNPRPHISLVWALGDVSGKLKQALKDIEKYQSSMSSLQKCNVRCKFSRVVCKVGKKVHDICKVAD
Source: Genetic information comes from the article