Information report for Ts5;ZmCYP94B1
Gene Details
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Functional Descriptions
- Tasselseed5 (Ts5), is similar to that of ts2. Here, we positionally cloned the underlying gene of Ts5 and characterized its function.
- Transgenic maize plants overexpressing GRMZM2G177668 exhibited a tassel-seed phenotype similar to that of Ts5.
- Ts5 mutant phenotype results from the disruption of this peak in tassels during sex determination.
- GRMZM2G177668 is the candidate Ts5 gene, encoding a JA-Ile hydroxylase.
Functional Keywords
- seed , ja , seed-phenotype
Literature and News
Gene Resources
- NCBI ID: 103652921
- UniProt accessions: A0A1D6PT32 , A0A3L6F524
- EMBL: NCVQ01000005
- AlphaFoldDB: A0A3L6F524
- InterPro: IPR001128 , IPR002401 , IPR036396
- PANTHER: PTHR24296
- SUPFAM: SSF48264
- Gene3D: 1.10.630.10
- CDD: cd11064
Homologs
- Arabidopsis thaliana: AT3G48520, AT2G27690, AT2G44890, AT1G01600, AT3G26125, AT2G26710
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.77KTPK
- Brachypodium distachyon: BRADI_2g44117v3, Bradi2g44117.9.p, Bradi2g44117.8.p, Bradi2g44117.7.p, Bradi2g44117.6.p
- Citrullus lanatus: Cla97C05G082570
- Oryza sativa: HAN1, OsGL1, CYP94C2b, CYP704B2, CYP96B5;WSL5, OsCYP96B4;BSH1, CYP704A3, CYP97A4
Sequences
cDNA Sequence
- >Zm00001eb169710_T001
CGACGCCAAACGCAAAGAGCTCTCCACACTGCCCAGCCAGACAAACAAGTGGGGAGACCTTACCTGGCTTCCCTCCACCTCTCTCTCGCCTCCTCCCCTCTACAAAAACGTGGGCATTAACAAGGACCCCTACCCCCACCACAAAGGAGGAGGCATGGACCTCCAATGGCGACCCTGCCGACCTCGCACCGGTCCCTCCCCCTCTACCCACATATATCCCACGCGTATATGTATATATATATCGACGAATAGTGTGCGCTGTCTCTCCCATGCTTCCTCTTAGTAGGTGCTCTCTCCCTACCTCCTCCAATCCGGGCCCGGGCCCCTCTCTAGGATTCTTGTTGCACGTACACACCATGATCTGCTACGTGCTGTGGTTAGCTGCGTGCTGCCTCCTCCTCCTCTTGTACAGCGTCCGATTCAGGTCCCGCATCAGCCATGGCAACGGCCCCAGGACCTACCCGTTGATTGGCTGCCTGGTCAGCTTCTACCAGAACCGGTGGCGGCTGCTGGACTGGTACACCGAGATGCTGGCGGCGTCGCCGACGCAGACGATCGTCGTGGACCGTCTGGGCGCGCGGCGGACCGTGGTGACGGCGAACCCGGTGAACGTGGAGCACATCCTCAAGGGCAACTTCGGCAACTACCCCAAGGGGAAGCCCTTCACCGACATCCTCGGCGACCTGCTCGGCACCGGCATCTTCAACGTCGACGGCGAGCTGTGGTACGCGCAGAGGAAGCTGGTGAGCCACGAGTTCTCGGCGCGCGCGCTCAGGGACCTGGAGTTCGCCGTGCTCGAGGACGAGGCGCGGGAGCGCCTCGTGCCGGCCCTGGGCCTGGCCGCGGCGCGCGGCGACGCCGTGGACATGCAGGACCTGCTCCGCCGCTTCTCCTTCGACGTCATCTGCCGCGTGTCGCTGGGCGTTGACCCCGGCTGCCTGGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACGCGGCCGCGGGGATCATCGCCAGGCGCGGCGCCGCGCCCGTGGCCGCCGTGTGGAAGGCCAAGCGCGCGCTGGGCGTGGGCTCGGAGCGCATGCTGCGCGAGGAGATCCGGGTCATCCACGAGGCCGTCATGGACCTCATCCGCATCCGCAAGAAGGAGCGCGGCCTGCAGGTCAACGACGCCGACGGGCGGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCGGACGAGATGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGGCGCGACACCACGTCGTCCGCGCTGACATGGTTCTTCTGGCTGCTCACCCGCCACCGCGACGTGGAACGGGAGGTCCTGCGGGAGGTCACGGGCGGCGGCGGCGCGAGCCACGCCGCAGGCGGGCAGGGCAAGATGAGCGTGCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCCAAGCACGCTGCGGCGGGCGACGTGCTGCCCGACGGCACCCGCGTGGAGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGCGGATGGAGTCCATCTGGGGCGCCAACGCCGCCGACTTCAGCGTGCAGCGCTGGCTGTCCATAGGGGAGGACAACGCGCCCCCCGCCGCGGTGGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGCGGGGCCGCGGACGTGCCTCGGCAAGGAGATGGCCTTCGTGCAGATGAAGTTCGTGGCCAGCACCGTGCTCCGGCGGTTCGAGATCGTGCCCGTTGACGAGGGCCGCGTGCCGGTGTTCCTGCCGCTGATGACGGCGCACATGGCCGGCGGGCTCAACGTGACGGTGAGGAGAAGAGGGGAACCCATTGCCGCTGCTGCTACTCCACTCGATCCTTCTGCTGATCCAGTATTATAAATATATTTAACCCTCCTCATGTAAGTACGACAAATTAAAATCATGATTATTTAGTTCCTATTATACATAAATTATATATAATTGAAATTCATGAGGACACGCAATGTTTTTGCTGCTTATCACAGACGATAGCAGTACACTTTTGTACCTTATCGATCATGATCATATGAAAGAGATACACAGCACGCA
CDS Sequence
- >Zm00001eb169710_T001
ATGCTTCCTCTTAGTAGGTGCTCTCTCCCTACCTCCTCCAATCCGGGCCCGGGCCCCTCTCTAGGATTCTTGTTGCACGTACACACCATGATCTGCTACGTGCTGTGGTTAGCTGCGTGCTGCCTCCTCCTCCTCTTGTACAGCGTCCGATTCAGGTCCCGCATCAGCCATGGCAACGGCCCCAGGACCTACCCGTTGATTGGCTGCCTGGTCAGCTTCTACCAGAACCGGTGGCGGCTGCTGGACTGGTACACCGAGATGCTGGCGGCGTCGCCGACGCAGACGATCGTCGTGGACCGTCTGGGCGCGCGGCGGACCGTGGTGACGGCGAACCCGGTGAACGTGGAGCACATCCTCAAGGGCAACTTCGGCAACTACCCCAAGGGGAAGCCCTTCACCGACATCCTCGGCGACCTGCTCGGCACCGGCATCTTCAACGTCGACGGCGAGCTGTGGTACGCGCAGAGGAAGCTGGTGAGCCACGAGTTCTCGGCGCGCGCGCTCAGGGACCTGGAGTTCGCCGTGCTCGAGGACGAGGCGCGGGAGCGCCTCGTGCCGGCCCTGGGCCTGGCCGCGGCGCGCGGCGACGCCGTGGACATGCAGGACCTGCTCCGCCGCTTCTCCTTCGACGTCATCTGCCGCGTGTCGCTGGGCGTTGACCCCGGCTGCCTGGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACGCGGCCGCGGGGATCATCGCCAGGCGCGGCGCCGCGCCCGTGGCCGCCGTGTGGAAGGCCAAGCGCGCGCTGGGCGTGGGCTCGGAGCGCATGCTGCGCGAGGAGATCCGGGTCATCCACGAGGCCGTCATGGACCTCATCCGCATCCGCAAGAAGGAGCGCGGCCTGCAGGTCAACGACGCCGACGGGCGGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCGGACGAGATGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGGCGCGACACCACGTCGTCCGCGCTGACATGGTTCTTCTGGCTGCTCACCCGCCACCGCGACGTGGAACGGGAGGTCCTGCGGGAGGTCACGGGCGGCGGCGGCGCGAGCCACGCCGCAGGCGGGCAGGGCAAGATGAGCGTGCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCCAAGCACGCTGCGGCGGGCGACGTGCTGCCCGACGGCACCCGCGTGGAGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGCGGATGGAGTCCATCTGGGGCGCCAACGCCGCCGACTTCAGCGTGCAGCGCTGGCTGTCCATAGGGGAGGACAACGCGCCCCCCGCCGCGGTGGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGCGGGGCCGCGGACGTGCCTCGGCAAGGAGATGGCCTTCGTGCAGATGAAGTTCGTGGCCAGCACCGTGCTCCGGCGGTTCGAGATCGTGCCCGTTGACGAGGGCCGCGTGCCGGTGTTCCTGCCGCTGATGACGGCGCACATGGCCGGCGGGCTCAACGTGACGGTGAGGAGAAGAGGGGAACCCATTGCCGCTGCTGCTACTCCACTCGATCCTTCTGCTGATCCAGTATTATAA
Protein Sequence
- >Zm00001eb169710_P001
MLPLSRCSLPTSSNPGPGPSLGFLLHVHTMICYVLWLAACCLLLLLYSVRFRSRISHGNGPRTYPLIGCLVSFYQNRWRLLDWYTEMLAASPTQTIVVDRLGARRTVVTANPVNVEHILKGNFGNYPKGKPFTDILGDLLGTGIFNVDGELWYAQRKLVSHEFSARALRDLEFAVLEDEARERLVPALGLAAARGDAVDMQDLLRRFSFDVICRVSLGVDPGCLDPALPAPRLAAAFDAAAGIIARRGAAPVAAVWKAKRALGVGSERMLREEIRVIHEAVMDLIRIRKKERGLQVNDADGRRSDLLSRMIECGYPDEMIRDMVISFIMAGRDTTSSALTWFFWLLTRHRDVEREVLREVTGGGGASHAAGGQGKMSVLHAALCETMRLYPPVAWDSKHAAAGDVLPDGTRVERGDRVTYFQYGMGRMESIWGANAADFSVQRWLSIGEDNAPPAAVAGVSPFKYPVFQAGPRTCLGKEMAFVQMKFVASTVLRRFEIVPVDEGRVPVFLPLMTAHMAGGLNVTVRRRGEPIAAAATPLDPSADPVL