Gene Details:
- Gene ID: Zm00001eb221050
- Gene Symbol: Smk11
- Gene Name: small kernel11
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Disruption of Smk11 severely affected the assembly and activity of mitochondrial complex IV, leading to delayed plant growth and seed development.
- Protein interactions studies revealed that Smk11 might interact with four putative complex IV assembly factors, Inner membrane peptidase 1A (ZmIMP1A), MYB domain protein 3R3 (ZmMYB3R-3), cytochrome c oxidase 23 (ZmCOX23), and mitochondrial ferredoxin 1 (ZmMFDX1), among which ZmMFDX1 might interact with subunits ZmCOX6a and ZmCOX-X1; ZmMYB3R-3 might also interact with ZmCOX6a.
- Smk11 encodes a mitochondria-localized tetratricopeptide repeat protein. Disruption of Smk11 severely affected the assembly and activity of mitochondrial complex IV, leading to delayed plant growth and seed development.
- Smk11 serves as an accessory assembly factor required for the normal assembly of subunits into complex IV, which will accelerate the elucidation of the assembly of complex IV in plant mitochondria.
- Smk11 is constitutively expressed and encodes a mitochondrial-localized TPR domain-containing protein.
Function-related keywords:
- growth , development , plant-development , seed , mitochondria , plant-growth , seed-development , seed-growth
Literature:
- Tetratricopeptide-containing SMALL KERNEL 11 is essential for the assembly of cytochrome c oxidase in maize mitochondria. DOI: 10.1093/plphys/kiad062 ; PMID: 36722259
Related News:
Gene Resources:
- NCBI ID: 100192003
- UniProt accessions: A0A804PAE5
Sequences:
cDNA Sequence
- >Zm00001eb221050_T001
CGCTAGGGCTTTGTTCTTGTTTGCCGCCGCCGGCACCACCCTCAGTCCCCACATGGCCGCCGCCTGCCTTCGCCGCCTCCACCGCATCCCTCATCCTGTCCTTAAGCTCGCCGCAGCCACTCACTGGCCCTTGCCATTCCCCGGTGCCAAGTTGGCTCCGGTCACACAGTCGTGCCCATCCGCCGACCGCGTCGAAGTACAGCTGAGCGCCCGCTGCCCCGGTTTTGCAAGTAATGGTAACTTCAAACATCGATGGCATCACAAGCTGGGTTCATCAGTTGGTGCTGTACTGATTGGACATGCAGCCTTTTTTCTTGGTTTGAGCAATGGCTCTGCATTTGCCCAGGAAGATTCAGTTAGCCCAGCTGCAGCTAGTGAGCATGCTGAGGGAAATGCTCCTGGTTTACAACCGATTGAAGATGGATCAGTGGTCTCAAACGAACACACGGTCAAATGGAGAATTTACACTGATAATGCGCGGGAGTTTTTCCAGAAAAGACAATTGGATGAGGCTGAGAAGTTATTCCAGGCAGCCCTACTAGAAGCTAAGGAAGGATTTGGACTTAGAGATCCACATGTCGCGTCAGCCCTTAACAATCTGGCAGAATTTTATAGGCTAAAGAAAGAGCATGTGAAAGCTGAACCACTATATTTGGAAGCAATTGAGATCCTGGAGGAATCATTTGGACCTGATGATATACGAGTTTACCTGCCACTGTAG
CDS Sequence
- >Zm00001eb221050_T001
ATGGCCGCCGCCTGCCTTCGCCGCCTCCACCGCATCCCTCATCCTGTCCTTAAGCTCGCCGCAGCCACTCACTGGCCCTTGCCATTCCCCGGTGCCAAGTTGGCTCCGGTCACACAGTCGTGCCCATCCGCCGACCGCGTCGAAGTACAGCTGAGCGCCCGCTGCCCCGGTTTTGCAAGTAATGGTAACTTCAAACATCGATGGCATCACAAGCTGGGTTCATCAGTTGGTGCTGTACTGATTGGACATGCAGCCTTTTTTCTTGGTTTGAGCAATGGCTCTGCATTTGCCCAGGAAGATTCAGTTAGCCCAGCTGCAGCTAGTGAGCATGCTGAGGGAAATGCTCCTGGTTTACAACCGATTGAAGATGGATCAGTGGTCTCAAACGAACACACGGTCAAATGGAGAATTTACACTGATAATGCGCGGGAGTTTTTCCAGAAAAGACAATTGGATGAGGCTGAGAAGTTATTCCAGGCAGCCCTACTAGAAGCTAAGGAAGGATTTGGACTTAGAGATCCACATGTCGCGTCAGCCCTTAACAATCTGGCAGAATTTTATAGGCTAAAGAAAGAGCATGTGAAAGCTGAACCACTATATTTGGAAGCAATTGAGATCCTGGAGGAATCATTTGGACCTGATGATATACGAGTTTACCTGCCACTGTAG
Protein Sequence
- >Zm00001eb221050_P001
MAAACLRRLHRIPHPVLKLAAATHWPLPFPGAKLAPVTQSCPSADRVEVQLSARCPGFASNGNFKHRWHHKLGSSVGAVLIGHAAFFLGLSNGSAFAQEDSVSPAAASEHAEGNAPGLQPIEDGSVVSNEHTVKWRIYTDNAREFFQKRQLDEAEKLFQAALLEAKEGFGLRDPHVASALNNLAEFYRLKKEHVKAEPLYLEAIEILEESFGPDDIRVYLPL
Source: Genetic information comes from the article