Gene Details:
- Gene ID: Zm00001eb156910
- Gene Symbol: RUM1
- Gene Name: ROOTLESS WITH UNDETECTABLE MERISTEMS 1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The maize (Zea mays L.) Aux/IAA protein RUM1 (ROOTLESS WITH UNDETECTABLE MERISTEMS 1) controls seminal and lateral root initiation.
- In line with this phenotype, RUM1-dependent mis-expression of several lignin biosynthesis genes was observed.
- The Aux/IAA gene RUM1 involved in seminal and lateral root formation controls vascular patterning in maize primary roots.
- Revealed the specific regulation of auxin signal transduction components by RUM1 and novel functions of RUM1 in vascular development.
- The RUM1 mutant displays enhanced lignification of aberrant pith cells.
- Heteroscedastic piecewise linear models were estimated for maize lateral roots of various lengths of both wild type and two mutants affected in auxin signaling (rtcs and rum-1).
Function-related keywords:
- root , development , auxin , root-development , root-initiation , iaa , auxin-biosynthesis , signal-transduction , vascular-development , lateral-root , lignin , lignin-biosynthesis , primary-root , iaa-biosynthesis , iaa-signaling
Literature:
- The Aux/IAA gene rum1 involved in seminal and lateral root formation controls vascular patterning in maize (Zea mays L.) primary roots. DOI: 10.1093/jxb/eru249 ; PMID: 24928984
- Deconstructing the root system of grasses through an exploration of development, anatomy and function. DOI: 10.1111/pce.14270 ; PMID: 35092025
- Identifying Developmental Zones in Maize Lateral Root Cell Length Profiles using Multiple Change-Point Models. DOI: 10.3389/fpls.2017.01750 ; PMID: 29123533
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Zm00001eb156910_T001
AGCAAGTCGTCGCTCCCACCCCACCTCACCATCTCCACTCCAAACAAGGGGAAGGCGAGCGACAGACAAACCCACCCTATCGCCCCTCCTCTGTCTCCTCTCTTGCCCACCCGCCCCAATGTCGCCGCCCCTCGAGCCCCACGACTACATCGGCCTCTCCGCCGTGGCCGCGGCCGCGCCGCCGACCCCGACCCCGACCTCCTCCTCCTCTTCGTCCTCCTCGCCGGCCCCCCGTCTCACCCTTCGCCTCGGCCTGCCGGGCTCCGAGTCCCCCGACCGCGACCGGGACTGCTGCGAGGACGTCGCCGCCACGCTCTCCCTCGGCCCGCTGCCGGCGGCCGCCGCCGTCTCCGCCAAGCGCGCCTTCCCGGACCCCGCCCAGCGCCCCGGCGCTTCCAAGGCTAGCGACGCCAAGCAGCAGGCTTCCCCCGCCGCGCCGCCGGCCGCCAAAGCGCAGGTGGTTGGATGGCCGCCCGTGCGCAACTACCGGAAGAATACCCTCGCCGCCGCGACCGCCTCCAGGAGCAAGGCGCCGGCGGAGGAGGCCGCGTCCGGAGCTGGGCCCATGTACGTGAAGGTGAGCATGGATGGCGCGCCCTACCTCAGGAAGGTGGACATCAAGATGTACTCCAGCTACGAGGACCTCTCCCTGGCGCTCGAGAAGATGTTCAGCTGCTTCATCGCTGGTCAAAGTGGTCTGCATAAATCATCGAGCAAAGACAGGCTCACTAATGGCTCAAAGGTGGATGCTCTCAAAGATCAGGAGTATGTCCTTACATATGAGGATAAGGATGCAGACTGGATGCTTGTCGGTGATCTTCCCTGGGATTATTTTACCTCTATCTGCCGGAAGCTCAAAATCATGAGGGGCTCTGATGCTGTTGGAATAGCTCCACGAACCGTCGAGCAGACAGGTCAGAACAAATAAGCTTTGGCCTTTGCCTGCATCCAAGGAAGACATCTGAGCTAGCTGGGAGACTATGTTGAAGGCTGAAGCCTGAAATAGTTGCCGGGAATCGTCAAAACCCGTCAAGTGTTTAGTGTAGTTTTCACGTGTCCTTGAGACATGTGCATTTGTATGTCTGTGACGTGATCCGTTAGATCGTGCAATCGTAGGTTGCTGTTCTTGTGCCCTTTGAAGGCCAGACAGATCAGGGAGCTCTCTGCTTCCTTAGTGCACTTGCTTTGCAGCATTCCTTGTTATTCTACTCTGAAATCATACATCATGCCACAAGAACCGATGGTTCGTGATGTCAAGAGAGCTGCCCTAATTGTTCCATTGTAACCTCGTAATTGTGTTCTTCCGCAGGAGAAATTGGTGCTGCACTCAGCTTCCTACC
CDS Sequence
- >Zm00001eb156910_T001
ATGTCGCCGCCCCTCGAGCCCCACGACTACATCGGCCTCTCCGCCGTGGCCGCGGCCGCGCCGCCGACCCCGACCCCGACCTCCTCCTCCTCTTCGTCCTCCTCGCCGGCCCCCCGTCTCACCCTTCGCCTCGGCCTGCCGGGCTCCGAGTCCCCCGACCGCGACCGGGACTGCTGCGAGGACGTCGCCGCCACGCTCTCCCTCGGCCCGCTGCCGGCGGCCGCCGCCGTCTCCGCCAAGCGCGCCTTCCCGGACCCCGCCCAGCGCCCCGGCGCTTCCAAGGCTAGCGACGCCAAGCAGCAGGCTTCCCCCGCCGCGCCGCCGGCCGCCAAAGCGCAGGTGGTTGGATGGCCGCCCGTGCGCAACTACCGGAAGAATACCCTCGCCGCCGCGACCGCCTCCAGGAGCAAGGCGCCGGCGGAGGAGGCCGCGTCCGGAGCTGGGCCCATGTACGTGAAGGTGAGCATGGATGGCGCGCCCTACCTCAGGAAGGTGGACATCAAGATGTACTCCAGCTACGAGGACCTCTCCCTGGCGCTCGAGAAGATGTTCAGCTGCTTCATCGCTGGTCAAAGTGGTCTGCATAAATCATCGAGCAAAGACAGGCTCACTAATGGCTCAAAGGTGGATGCTCTCAAAGATCAGGAGTATGTCCTTACATATGAGGATAAGGATGCAGACTGGATGCTTGTCGGTGATCTTCCCTGGGATTATTTTACCTCTATCTGCCGGAAGCTCAAAATCATGAGGGGCTCTGATGCTGTTGGAATAGCTCCACGAACCGTCGAGCAGACAGGTCAGAACAAATAA
Protein Sequence
- >Zm00001eb156910_P001
MSPPLEPHDYIGLSAVAAAAPPTPTPTSSSSSSSSPAPRLTLRLGLPGSESPDRDRDCCEDVAATLSLGPLPAAAAVSAKRAFPDPAQRPGASKASDAKQQASPAAPPAAKAQVVGWPPVRNYRKNTLAAATASRSKAPAEEAASGAGPMYVKVSMDGAPYLRKVDIKMYSSYEDLSLALEKMFSCFIAGQSGLHKSSSKDRLTNGSKVDALKDQEYVLTYEDKDADWMLVGDLPWDYFTSICRKLKIMRGSDAVGIAPRTVEQTGQNK
Source: Genetic information comes from the article