Information report for RTH6
Gene Details
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Functional Descriptions
- Root hairs of the monogenic recessive maize mutant roothairless 6 (RTH6) are arrested after bulge formation during the transition to tip growth and display a rough cell surface.
- Phylogenetic analyses revealed that RTH6 is part of a monocot specific clade of D-type cellulose synthases.
- RTH6 gene of maize which encodes CSLD5, a monocot and root hair-specific D-type cellulose synthase required for the transition from bulge formation to tip growth in root hair formation.
- The transmembrane protein RTH6 is arranged in rosettes and synthesizes cellulose at the plasma membrane47 which is extruded to the inner side of the cell wall in the root hair tip and thus reinforces the tubular shaft.
- In addition to the strong knock down of RTH6 expression in young primary roots of the mutant RTH6, the gene is also significantly down-regulated in rth3 and rth5 mutants, while it is up-regulated in rth2 mutants, suggesting that these genes interact in cell wall biosynthesis.
Functional Keywords
- root , growth , down-regulated-genes , root-growth , cell-wall , cellulose , primary-root , root-hair
Literature and News
- Characterization of maize roothairless6 which encodes a D-type cellulose synthase and controls the switch from bulge formation to tip growth. DOI: 10.1038/srep34395 ; PMID: 27708345
- Breeding maize of ideal plant architecture for high-density planting tolerance through modulating shade avoidance response and beyond. DOI: 10.1111/jipb.13603 ; PMID: 38131117
Gene Resources
- NCBI ID: 103637736
- UniProt accessions: A0A1D6KA41
- EMBL: CM007647
- EnsemblPlants: Zm00001eb025100_T001
- Gramene: Zm00001eb025100_T001
- KEGG: zma:103637736
- OMA: TWIHPSQ
- ExpressionAtlas: Zm00001eb025100
- InterPro: IPR005150 , IPR013083 , IPR029044
- PANTHER: PTHR13301
- SUPFAM: SSF53448 , SSF57850
- Gene3D: 3.30.40.10 , 3.90.550.10
- OrthoDB: A0A1D6KA41
- SMR: A0A1D6KA41
Sequences
cDNA Sequence
- >Zm00001eb025100_T001
CCCCACCCCGCTTCCCGTCCCGGCCTCCCCGTGCCAGACCAATCGACCACTTCAATTCCAGCTAGCTCCAAGCATTCAAATAACCGTGCCAGGGCAGCTGGCGTTTCCATGGGCGCCATCCCCCCAGGTCCATTTTGCTTCTTCCGTTCCGCTTTCATCCTCCTCTTGGACTTGGCCTCTCTCGACCTGCTACTAAACACTCCGGATTAGTCGTCGTTGTCTGCAGCGAGGAACAAAAGATAGCCATAATAACAGCAGAGCACGACCATTTTGGACTCCCAACAAGGACCAGCAGGGGCAGGGCAATTAATTAAACGAGCACTGACGCCAGCCAGCCATGGCGTCCAAGGGGATCCTTAAAAACAGCGGCTCCCGCCGCATGCCGCCGCAGGGCGCCGGCAGCAGGCCGCCCACGGCGCCCACGTCGGCGCCCACGGTCGTCTTCGGGCGCCGGACCGACTCTGGGCGCTTCATCAGCTACTCTCGCGACGACCTGGACTCGGAGATCAGCAGCGTCGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCCGACAACCAGCCCATGGACGAGGACGACAGCGGCACAGCCAGGGCCGAGGACCAGCGCTACGTCTCCGGCTCGCTCTTCACCGGCGGCTTCAACACCGTCACCCGCGCGCATGTCATGGACAAGCCCGACGGCGACGCCGCCGGGCGCCGCGGCGGCGGCGGTGCCAAGGGACCCAGCGCGTGCATGGTCGAGGGGTGCGACGCCAGGGCCATGCGCGACGCCCGCGGCGATGACGTCCTCCCCTGCGAGTGCGATTTCAGGGTCTGCGTCGACTGCTTCACCGACGCCGTCAAGGCCGGCGCCGGCGTCTGCCCGGGGTGCAAGGAGCCTTACAAGAACACCGAGTGGGAGGGCCTTGGCGCCGGCGCGGCCGAGGAGGTCACGCGGGCGCTCTCGCTGCCCCGCGGGCCTGCGGGCGCCAACGGCCACAGGATGGAGAGGCGCCTGTCGCTGGTCAAGCAGGCCAACGTCAACCAGTCCGGCGAGTTCGATCATAACCTCTGGCTCTTCCAGACCAAGGGCACCTATGGCTATGGCAACGCCATCTGGCCCCAGGATGAAGCAGACGACGACACCGACGGCGGTGCCCCGGCTGGGCATCCCAAGGAGCTCTTAACCAAACCGTGGCGCCCGCTCACCCGCAAGCTCAGGATTCCAGCAGCCGTCATCAGTCCTTACAGGCTCCTCGTCCTCATCCGCTTGGTCGCACTGGCCTTCTTCCTCATGTGGCGCATCAAGCACCAAAACGAGGACGCCATCTGGCTCTGGGGAATGTCCATTGTCTGCGAGCTCTGGTTCGCCTTCTCATGGGTACTGGACCAGCTCCCGAAGCTGTGCCCCATCAACCGCGCGACAGACCTCTCTGTGCTCAAGGAGAAGTTTGAGACGCCCACGCCTAACAATCCAACAGGCAAGTCGGATCTCCCTGGAGTCGACATCTTCGTGTCAACCGCTGATCCAGAGAAGGAGCCGGTCCTGGTCACAGCGAACACAATTCTCTCCATCCTCGCGGCGGACTACCCCGTCGAGAAGCTTGCGTGCTACCTATCGGACGATGGAGGGGCGCTGCTCACCTTCGAGGCGATGGCTGAAGCGGCGAGCTTCGCCAACCTCTGGGTGCCATTCTGCAGGAAGCATGACATCGAACCCAGGAACCCGGACAGCTACTTCAACCTGAGGAGAGATCCCTTCAAGAACAAGGTGAAGCCAGACTTCGTCAAGGACAGGAGGCGCGTCAAGCGTGAGTACGACGAGTTCAAGGTCCGTGTGAATGGCTTGCCAGATGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAAGAGATCCAGGCCATGAATCTTCAGAGGGAAAAACTGAAGGGCGGCGGTGACGAGCCGCCGTTCGAACCGGTGAAGATTCCCAAGGCGACATGGATGGCTGACGGCACTCACTGGCCCGGCACCTGGCTCCAACCTTCGCAGGATCATGCTCGAGGTGATCACGCAGGAATCATACAGGTCATGCTGAAACCACCAAGCGACATGCCCACCACCATGTACGACGCGGCTTCCAAGACACCTCTTGACTTGGCAGGAGTGGACACTCGGCTCCCAATGCTGGTGTACATGTCGAGGGAGAAGCGCCCAGGATACGACCACAACAAGAAAGCAGGCGCGATGAACGCACTGGTCCGCGCATCGGCGATCATGTCCAACGGCCCGTTCATCCTCAACCTGGACTGCGACCACTACATCTACAACTCCAAGGCCTTGAGGGAGGGCATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTGCAGTTCCCGCAGAGGTTCGAAGGCATCGACCCTTCCGATCGCTATGCCAACCACAACACGGTTTTCTTCGACGTCAACATGCGCGCGCTCGATGGTCTTCAAGGGCCGGTGTACGTTGGCACTGGGTGCCTCTTCCGTCGAATCGCGCTCTATGGCTTCGACCCACCCCGTTCCAAGGACCACAGCCCAGGGTTCTGTAGCTGCTGTCTCCCACGCCGCCGCAAGCCGTCAGCAGCTTCCCGCGAGGAGACCATGGCTCTTCGCATGGGCGGTTTTGATGGAGACAGCATGGACCTTGCGACGTTCCCAAAGAAGTTTGGGAACTCAAGCTTTCTCATCGACTCCATCCCGGTAGCAGAGTTCCAGGGCAGGCCCCTGGCTGACCACCCATCTGTGAAGAACGGCCGCCCACCTGGCGCTCTCACAATCCCTCGTGAAATGCTGGATGCGTCCATTGTGGCAGAAGCGATCAGTGTGGTCTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGATAAGGGTGGGGTGGATCTATGGCTCCGTCACCGAGGATGTCGTCACAGGGTACCGCATGCACAACCGTGGATGGAAGTCGGTGTACTGTGTCACGCAGCGTGATGCCTTCCGCGGCACTGCTCCGATCAACCTTACCGATCGGCTTCACCAGGTGCTTCGATGGGCCACTGGCTCGGTTGAGATCTTCTTCTCCCGCAACAATGCGTTGTTTGCCAGCTCCAAGATGAAGGTGCTCCAAAGGATCGCATACCTTAATGTTGGTATCTATCCCTTCACGTCCATCTTCCTCATTGTCTACTGCTTCCTTCCAGCACTCTCCCTCTTCTCAGGACAGTTCATTGTGCAAACGCTCAACGTCACCTTCCTGACATACCTACTCATCATCACCGTCACCCTTTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCTGGCATTGCTCTCGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGTGGAACCAGCGCCCACCTGGCTGCTGTGCTGCAGGGCCTTCTAAAAGTGGTTGCAGGGATTGAGATCTCATTTACGCTCACTTCAAAACAAGTGGGTGATGATGTAGAGGATGAATTTGCGGAACTGTACATAGTGAAATGGACATCGCTAATGATACCGCCGCTCACCATCATCATGATCAACCTTGTGGCCATTGCTGTTGGCTTCAGCCGGACGATCTACAGCACAATCCCGCAATGGAGCAAGCTGCTTGGGGGAGTGTTCTTCAGCTTCTGGGTGCTTGCTCATCTGTATCCATTTGCCAAGGGGCTCATGGGAAGGAGAGGAAGGACGCCCACTATTGTGTATGTCTGGTCTGGACTCGTCTCCATCACCATATCACTGCTCTGGATTGCAATCAAGCCTCCATCACAAGCTGCCAACTCACAATTCGGTGGGTCATTTTCTTTCCCTTGATCCAGTATCTTCAAACCAATATGTCTTACTGGATGGATCAGGAAGTTACAAGAGGCAACAAGAAATTCAGGTTTTGCAGCATATCAAAAAAAATGCCCTGTGGTTTAGACAACAGGTCACTGTGCAGCTCAGTTTCATTACAAAGTGGAGGACATAGGATGTATCTATTCTAGCACCTTAAAAGGTGGAACCACTGTTTTGATTCTTTCTTTATTTGTTCTTTTATTTCTTTAGAGTTCGCTCTCATTTGAATCATATGTGCCTTAAAAAAGGTGTAATACGTTGTTAGCATCTAAAAGGTTTTCTCAAGAGCTTATTGTCGGC
CDS Sequence
- >Zm00001eb025100_T001
ATGGCGTCCAAGGGGATCCTTAAAAACAGCGGCTCCCGCCGCATGCCGCCGCAGGGCGCCGGCAGCAGGCCGCCCACGGCGCCCACGTCGGCGCCCACGGTCGTCTTCGGGCGCCGGACCGACTCTGGGCGCTTCATCAGCTACTCTCGCGACGACCTGGACTCGGAGATCAGCAGCGTCGACTTCCAGGACTACCACGTCCACATCCCCATGACGCCCGACAACCAGCCCATGGACGAGGACGACAGCGGCACAGCCAGGGCCGAGGACCAGCGCTACGTCTCCGGCTCGCTCTTCACCGGCGGCTTCAACACCGTCACCCGCGCGCATGTCATGGACAAGCCCGACGGCGACGCCGCCGGGCGCCGCGGCGGCGGCGGTGCCAAGGGACCCAGCGCGTGCATGGTCGAGGGGTGCGACGCCAGGGCCATGCGCGACGCCCGCGGCGATGACGTCCTCCCCTGCGAGTGCGATTTCAGGGTCTGCGTCGACTGCTTCACCGACGCCGTCAAGGCCGGCGCCGGCGTCTGCCCGGGGTGCAAGGAGCCTTACAAGAACACCGAGTGGGAGGGCCTTGGCGCCGGCGCGGCCGAGGAGGTCACGCGGGCGCTCTCGCTGCCCCGCGGGCCTGCGGGCGCCAACGGCCACAGGATGGAGAGGCGCCTGTCGCTGGTCAAGCAGGCCAACGTCAACCAGTCCGGCGAGTTCGATCATAACCTCTGGCTCTTCCAGACCAAGGGCACCTATGGCTATGGCAACGCCATCTGGCCCCAGGATGAAGCAGACGACGACACCGACGGCGGTGCCCCGGCTGGGCATCCCAAGGAGCTCTTAACCAAACCGTGGCGCCCGCTCACCCGCAAGCTCAGGATTCCAGCAGCCGTCATCAGTCCTTACAGGCTCCTCGTCCTCATCCGCTTGGTCGCACTGGCCTTCTTCCTCATGTGGCGCATCAAGCACCAAAACGAGGACGCCATCTGGCTCTGGGGAATGTCCATTGTCTGCGAGCTCTGGTTCGCCTTCTCATGGGTACTGGACCAGCTCCCGAAGCTGTGCCCCATCAACCGCGCGACAGACCTCTCTGTGCTCAAGGAGAAGTTTGAGACGCCCACGCCTAACAATCCAACAGGCAAGTCGGATCTCCCTGGAGTCGACATCTTCGTGTCAACCGCTGATCCAGAGAAGGAGCCGGTCCTGGTCACAGCGAACACAATTCTCTCCATCCTCGCGGCGGACTACCCCGTCGAGAAGCTTGCGTGCTACCTATCGGACGATGGAGGGGCGCTGCTCACCTTCGAGGCGATGGCTGAAGCGGCGAGCTTCGCCAACCTCTGGGTGCCATTCTGCAGGAAGCATGACATCGAACCCAGGAACCCGGACAGCTACTTCAACCTGAGGAGAGATCCCTTCAAGAACAAGGTGAAGCCAGACTTCGTCAAGGACAGGAGGCGCGTCAAGCGTGAGTACGACGAGTTCAAGGTCCGTGTGAATGGCTTGCCAGATGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGCGAAGAGATCCAGGCCATGAATCTTCAGAGGGAAAAACTGAAGGGCGGCGGTGACGAGCCGCCGTTCGAACCGGTGAAGATTCCCAAGGCGACATGGATGGCTGACGGCACTCACTGGCCCGGCACCTGGCTCCAACCTTCGCAGGATCATGCTCGAGGTGATCACGCAGGAATCATACAGGTCATGCTGAAACCACCAAGCGACATGCCCACCACCATGTACGACGCGGCTTCCAAGACACCTCTTGACTTGGCAGGAGTGGACACTCGGCTCCCAATGCTGGTGTACATGTCGAGGGAGAAGCGCCCAGGATACGACCACAACAAGAAAGCAGGCGCGATGAACGCACTGGTCCGCGCATCGGCGATCATGTCCAACGGCCCGTTCATCCTCAACCTGGACTGCGACCACTACATCTACAACTCCAAGGCCTTGAGGGAGGGCATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGCTACGTGCAGTTCCCGCAGAGGTTCGAAGGCATCGACCCTTCCGATCGCTATGCCAACCACAACACGGTTTTCTTCGACGTCAACATGCGCGCGCTCGATGGTCTTCAAGGGCCGGTGTACGTTGGCACTGGGTGCCTCTTCCGTCGAATCGCGCTCTATGGCTTCGACCCACCCCGTTCCAAGGACCACAGCCCAGGGTTCTGTAGCTGCTGTCTCCCACGCCGCCGCAAGCCGTCAGCAGCTTCCCGCGAGGAGACCATGGCTCTTCGCATGGGCGGTTTTGATGGAGACAGCATGGACCTTGCGACGTTCCCAAAGAAGTTTGGGAACTCAAGCTTTCTCATCGACTCCATCCCGGTAGCAGAGTTCCAGGGCAGGCCCCTGGCTGACCACCCATCTGTGAAGAACGGCCGCCCACCTGGCGCTCTCACAATCCCTCGTGAAATGCTGGATGCGTCCATTGTGGCAGAAGCGATCAGTGTGGTCTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGATAAGGGTGGGGTGGATCTATGGCTCCGTCACCGAGGATGTCGTCACAGGGTACCGCATGCACAACCGTGGATGGAAGTCGGTGTACTGTGTCACGCAGCGTGATGCCTTCCGCGGCACTGCTCCGATCAACCTTACCGATCGGCTTCACCAGGTGCTTCGATGGGCCACTGGCTCGGTTGAGATCTTCTTCTCCCGCAACAATGCGTTGTTTGCCAGCTCCAAGATGAAGGTGCTCCAAAGGATCGCATACCTTAATGTTGGTATCTATCCCTTCACGTCCATCTTCCTCATTGTCTACTGCTTCCTTCCAGCACTCTCCCTCTTCTCAGGACAGTTCATTGTGCAAACGCTCAACGTCACCTTCCTGACATACCTACTCATCATCACCGTCACCCTTTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCTGGCATTGCTCTCGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGTGGAACCAGCGCCCACCTGGCTGCTGTGCTGCAGGGCCTTCTAAAAGTGGTTGCAGGGATTGAGATCTCATTTACGCTCACTTCAAAACAAGTGGGTGATGATGTAGAGGATGAATTTGCGGAACTGTACATAGTGAAATGGACATCGCTAATGATACCGCCGCTCACCATCATCATGATCAACCTTGTGGCCATTGCTGTTGGCTTCAGCCGGACGATCTACAGCACAATCCCGCAATGGAGCAAGCTGCTTGGGGGAGTGTTCTTCAGCTTCTGGGTGCTTGCTCATCTGTATCCATTTGCCAAGGGGCTCATGGGAAGGAGAGGAAGGACGCCCACTATTGTGTATGTCTGGTCTGGACTCGTCTCCATCACCATATCACTGCTCTGGATTGCAATCAAGCCTCCATCACAAGCTGCCAACTCACAATTCGGTGGGTCATTTTCTTTCCCTTGA
Protein Sequence
- >Zm00001eb025100_P001
MASKGILKNSGSRRMPPQGAGSRPPTAPTSAPTVVFGRRTDSGRFISYSRDDLDSEISSVDFQDYHVHIPMTPDNQPMDEDDSGTARAEDQRYVSGSLFTGGFNTVTRAHVMDKPDGDAAGRRGGGGAKGPSACMVEGCDARAMRDARGDDVLPCECDFRVCVDCFTDAVKAGAGVCPGCKEPYKNTEWEGLGAGAAEEVTRALSLPRGPAGANGHRMERRLSLVKQANVNQSGEFDHNLWLFQTKGTYGYGNAIWPQDEADDDTDGGAPAGHPKELLTKPWRPLTRKLRIPAAVISPYRLLVLIRLVALAFFLMWRIKHQNEDAIWLWGMSIVCELWFAFSWVLDQLPKLCPINRATDLSVLKEKFETPTPNNPTGKSDLPGVDIFVSTADPEKEPVLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFNLRRDPFKNKVKPDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKLKGGGDEPPFEPVKIPKATWMADGTHWPGTWLQPSQDHARGDHAGIIQVMLKPPSDMPTTMYDAASKTPLDLAGVDTRLPMLVYMSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKALREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKDHSPGFCSCCLPRRRKPSAASREETMALRMGGFDGDSMDLATFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPREMLDASIVAEAISVVSCWYEEKTEWGIRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTQRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITVTLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKQVGDDVEDEFAELYIVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVSITISLLWIAIKPPSQAANSQFGGSFSFP