Gene Details:
- Gene ID: Zm00001eb003920
- Gene Symbol: RTCS ZmLBD2 rtcs1
- Gene Name: rootless concerning crown and seminal roots1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The maize RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation.
- RTCS and RTCL are auxin-responsive genes involved in the early events that lead to the initiation and maintenance of seminal and shoot-borne root primordia formation.
- The RTCS and RTCL promoters contain auxin response elements and the genes are auxin inducible.
Function-related keywords:
- root , shoot , auxin , root-initiation , auxin-response
Literature:
- The maize (Zea mays L.) RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation. DOI: 10.1111/j.1365-313X.2007.03075.x ; PMID: 17425722
Related News:
Gene Resources:
- NCBI ID: LOC100101548
- UniProt accessions: A5H448
Sequences:
cDNA Sequence
- >Zm00001eb003920_T001
TAATCCCCTGGCCCTAATCCCCCAGCCCTGCCGTCTCCTCCTTATAAGCAATGGCGGAGGGGTCTTGCTCTTGCATTGCACCTCCGGCCACCGCGCCATAGCCCGCAGTAATTAAGCAGGCGAGAACGACGAAGAGGCGGTCACGCACCACACCGATCAATCCAGCTCGAGCGACCGATCACACGTGCAGCACAGCACAGCACAGCGGTGCTCGGCGAAGAGAGATGACGGGGTTCGGGTCACCGTGCGGGGCGTGCAAGTTCCTGCGCCGCAAGTGCGTGCGCGGCTGCGTCTTCGCGCCCTACTTCTGCCACGAGCAGGGCGCGGCGCACTTCGCCGCCATCCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCGCGCACCTGCCGCTCGCCGACCGCGCCGAGGCCGCCGTCACCATCTCCTACGAGGCGCAGGCGAGGCTGCGGGACCCCATCTATGGCTGCGTCGCCCACATCTTCGCGCTACAGCAGCAGGTTATGACCCTGCAGGCGCAGCTGGCGTCGCTCAAGGCGCAGGCGGCGCAGGGGCAGCAGGGCGTGCACGAAGACGCCAAGGGCTACGTGGGCAGCGCCGCCGCGGAGCAGCTAGGGTACGGCTACCCCTGGTGCAGCGGCAATGGAGGCGCCGCAGCAGCAGCAGCAGGCGCCGTGGGCGCGCCCGCCGCGCAGCCGGGCGCGTACGGCAATGGCGCGCACGAGTCCCTGACCGCGCTGCTGGGGTCGTCGGACTACATGCAGCAGTCGCTGTACCACGCGTTCGAGCAGGCCGGCGCGGACGACGACGACGGCCGGCAGGGGTACGCCTTCGAGGCAGCGGCGGAGTCCTCGTCGCTCGGGGCGGAGGAGAGCGGGTGGAGGTCGTCGTCGGGGTACCAAGACTGCGAGGACCTGCAGAGCGTGGCTTACGCTTACCTGAACCATCGCTCGTAAGAACTGAGAACTACTACTACTACAAGAGAGAGAGAGAGAGATATAGATATAGACATATCTGTCCTCAATTCCTGATCATGTTTTGGACTTTAGCCTGGGGAAATATATGCGCGATTTTCGATCGATCAGTCGATCGGTCTCCGCTACAAATAATCCAGAAGCATGCATGCATGTGACAGACCACTGATATATAATAGATCCACACATTATTGATCATCAGTGTAGAAATTAACGTACGTAGCCTAATTAATTGGACAAAGAAAATGGAGAGCCC
CDS Sequence
- >Zm00001eb003920_T001
ATGACGGGGTTCGGGTCACCGTGCGGGGCGTGCAAGTTCCTGCGCCGCAAGTGCGTGCGCGGCTGCGTCTTCGCGCCCTACTTCTGCCACGAGCAGGGCGCGGCGCACTTCGCCGCCATCCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCGCGCACCTGCCGCTCGCCGACCGCGCCGAGGCCGCCGTCACCATCTCCTACGAGGCGCAGGCGAGGCTGCGGGACCCCATCTATGGCTGCGTCGCCCACATCTTCGCGCTACAGCAGCAGGTTATGACCCTGCAGGCGCAGCTGGCGTCGCTCAAGGCGCAGGCGGCGCAGGGGCAGCAGGGCGTGCACGAAGACGCCAAGGGCTACGTGGGCAGCGCCGCCGCGGAGCAGCTAGGGTACGGCTACCCCTGGTGCAGCGGCAATGGAGGCGCCGCAGCAGCAGCAGCAGGCGCCGTGGGCGCGCCCGCCGCGCAGCCGGGCGCGTACGGCAATGGCGCGCACGAGTCCCTGACCGCGCTGCTGGGGTCGTCGGACTACATGCAGCAGTCGCTGTACCACGCGTTCGAGCAGGCCGGCGCGGACGACGACGACGGCCGGCAGGGGTACGCCTTCGAGGCAGCGGCGGAGTCCTCGTCGCTCGGGGCGGAGGAGAGCGGGTGGAGGTCGTCGTCGGGGTACCAAGACTGCGAGGACCTGCAGAGCGTGGCTTACGCTTACCTGAACCATCGCTCGTAA
Protein Sequence
- >Zm00001eb003920_P001
MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRAEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAQAAQGQQGVHEDAKGYVGSAAAEQLGYGYPWCSGNGGAAAAAAGAVGAPAAQPGAYGNGAHESLTALLGSSDYMQQSLYHAFEQAGADDDDGRQGYAFEAAAESSSLGAEESGWRSSSGYQDCEDLQSVAYAYLNHRS
Source: Genetic information comes from the article