Information report for RCL1
Gene Details
|
|
Functional Descriptions
- A conserved RNA 3′-terminal phosphate cyclase (RCL)-like protein, RCL1, that functions in 18S rRNA maturation. RCL1 is highly expressed in the embryo and endosperm during early seed development.
- Loss of RCL1 function resulted in lethality due to aborted embryo cell differentiation.
- RCL1, that functions in 18S rRNA maturation. RCL1 is highly expressed in the embryo and endosperm during early seed development.
- RCL1-mediated 18S pre-rRNA processing is essential for ribosome function and messenger RNA translation during maize seed development.
- The RCL1 mutant exhibits aberrant embryo and endosperm development.
- The RCL1 mutant shows multiple cell differentiation defects
Functional Keywords
Literature and News
- Maize RNA 3'-terminal phosphate cyclase-like protein promotes 18S pre-rRNA cleavage and is important for kernel development. DOI: 10.1093/plcell/koac052 ; PMID: 35167702
- Maize Shrek1 encodes a WD40 protein that regulates pre-rRNA processing in ribosome biogenesis. DOI: 10.1093/plcell/koac216 ; PMID: 35867001
Gene Resources
- NCBI ID: LOC100191832
- UniProt accessions: B4FAC1
- EMBL: BT034059 , BT062614 , CM007650 , EU961415
- EnsemblPlants: Zm00001eb316080_T001
- Gramene: Zm00001eb316080_T001
- KEGG: zma:100191832
- OMA: YTDQNKG
- ExpressionAtlas: Zm00001eb316080
- InterPro: IPR000228 , IPR013791 , IPR013792 , IPR016443 , IPR020719 , IPR023797 , IPR036553 , IPR037136
- PANTHER: PTHR11096 , PTHR11096:SF1
- SUPFAM: SSF55205
- PROSITE: PS01287
- Gene3D: 3.30.360.20 , 3.65.10.20
- OrthoDB: B4FAC1
- SMR: B4FAC1
- CDD: cd00875
Sequences
cDNA Sequence
- >Zm00001eb316080_T001
TCTATCTGACCCAACACGTGGGTCTTCTCCACTGCTGCAATAAAAATGCCTCAAGCTGCGGCCACCCGCCGGGACCAGCCTCGCCGCCGCGCGCCAAAACCCTAACCCCTCCCGGCGTCCGCCCCTGCCGCGTGACGGCCCCAGAGATGGGGCGAGACAAGAGCCGTCGTCTATACGGCAGCCGCCACTTCCGGCAGCGGCTGGTGCTGGCGACGCTCACCTCTACCGCTGTCACCATCGAGGACATCCGCTCTGGGGACGCTTCGCCGGGGCTCCGCCCTTACGAGGTCTCCCTCCTCCGCCTCCTCGACAAGATCTCAGACCATCACACCATTGACCTCAACGAGACAGGAACGAAGCTGAGGTACCGGCCGGGGGTGATTATAGGGGGAAAGGGCCTTGAGCACGACTGCGGGGTGCACCGGGGTATTGGATACTTTCTTGAGCCACTCATACTGCTTGGTCTATTTTCGAGGGCCCCTATATCGATTCGGCTTAAAGGAATCACTAATGATACAAAGGATCCTTCTGTGGATACTTTCCGGACAACAACCTTGCATATGCTCAAGCACTTTGGTGTTCCTCTGGATGGTTTCGATCTAAATATTGACAGCCGTGGATCTCCTCCTCTTGGTGGTGGTGAGGTGTTTCTCCGGGTTCGCAATATAAATAGCACATTGACGGCAGCAAATTGGGTAGATGAAGGTATGGTGAAGAGGATAAGGGGTGTTTCGTTCTCCACTAGAGTATCTCCACAGTTGGAAAACCGCATCATTTATGCTGCACGTGGAATCTTCAATCGTTTCATTCCTGATGTTCATATACACACGGATCATAGATCTGGTTCTGCTGGTGGGAGGTCACCAGGCTATGGTGTATCGTTAGTTGCTGAGACCACTACGGGATGCCTGCTCTCTGTAGATGTCACTGTGAGTTATCCTAGTGTTGATGAAATAAATGAAGAATCTGAGAAGCCTGAGCTGACTTCTCCGGAGGATCTTGGTGTTCAAGCTGCATCAATGCTACTAGAAGAGGTGGCTCAAGGAGGTGTTGTTGATTCTACACATCAGGGCCTCCTATTTATTCTGTGTGCTTTATGCCCACCGGATGTATCAAAGGTTCGTGTGGGACAGTTGACTCCATATGGTATAGAGACACTTCGAAACATCAGAGATTTTCTTGACGTCAAGTTCATCATCAAGCCTGATCCCAATTCAAACACCGTTACTTTAAAATGTGTTGGCGCGGGAGTGAAGAATCTTGCTCGGAAGATTTCATAAGCAACATGACCATTAATCTGATGAAGGATCCATGCCACATCAAGAGACTACTATGAGACCCTATTTGTAACTGCAAACAACAGTGTAGGAGTTTCCCTTAGCTGTTACTGCTGAAATTCTATTCGAGGTCCATGATGTCTTAGACATCACCGATGTACATCAGTATTAGAATGGATTGTTCTGATCATGATGCCCTGTATTGTCGACACATTTTTGCATCACATTGCTTCACTCCAACTATGCCATGACATGCTGATACATAGAAATGAAGAAAAGGTGACAAACGTCCAGACTAAATGTTTGTTTTACCATGTGCATTTTGTTTGATC
CDS Sequence
- >Zm00001eb316080_T001
ATGGGGCGAGACAAGAGCCGTCGTCTATACGGCAGCCGCCACTTCCGGCAGCGGCTGGTGCTGGCGACGCTCACCTCTACCGCTGTCACCATCGAGGACATCCGCTCTGGGGACGCTTCGCCGGGGCTCCGCCCTTACGAGGTCTCCCTCCTCCGCCTCCTCGACAAGATCTCAGACCATCACACCATTGACCTCAACGAGACAGGAACGAAGCTGAGGTACCGGCCGGGGGTGATTATAGGGGGAAAGGGCCTTGAGCACGACTGCGGGGTGCACCGGGGTATTGGATACTTTCTTGAGCCACTCATACTGCTTGGTCTATTTTCGAGGGCCCCTATATCGATTCGGCTTAAAGGAATCACTAATGATACAAAGGATCCTTCTGTGGATACTTTCCGGACAACAACCTTGCATATGCTCAAGCACTTTGGTGTTCCTCTGGATGGTTTCGATCTAAATATTGACAGCCGTGGATCTCCTCCTCTTGGTGGTGGTGAGGTGTTTCTCCGGGTTCGCAATATAAATAGCACATTGACGGCAGCAAATTGGGTAGATGAAGGTATGGTGAAGAGGATAAGGGGTGTTTCGTTCTCCACTAGAGTATCTCCACAGTTGGAAAACCGCATCATTTATGCTGCACGTGGAATCTTCAATCGTTTCATTCCTGATGTTCATATACACACGGATCATAGATCTGGTTCTGCTGGTGGGAGGTCACCAGGCTATGGTGTATCGTTAGTTGCTGAGACCACTACGGGATGCCTGCTCTCTGTAGATGTCACTGTGAGTTATCCTAGTGTTGATGAAATAAATGAAGAATCTGAGAAGCCTGAGCTGACTTCTCCGGAGGATCTTGGTGTTCAAGCTGCATCAATGCTACTAGAAGAGGTGGCTCAAGGAGGTGTTGTTGATTCTACACATCAGGGCCTCCTATTTATTCTGTGTGCTTTATGCCCACCGGATGTATCAAAGGTTCGTGTGGGACAGTTGACTCCATATGGTATAGAGACACTTCGAAACATCAGAGATTTTCTTGACGTCAAGTTCATCATCAAGCCTGATCCCAATTCAAACACCGTTACTTTAAAATGTGTTGGCGCGGGAGTGAAGAATCTTGCTCGGAAGATTTCATAA
Protein Sequence
- >Zm00001eb316080_P001
MGRDKSRRLYGSRHFRQRLVLATLTSTAVTIEDIRSGDASPGLRPYEVSLLRLLDKISDHHTIDLNETGTKLRYRPGVIIGGKGLEHDCGVHRGIGYFLEPLILLGLFSRAPISIRLKGITNDTKDPSVDTFRTTTLHMLKHFGVPLDGFDLNIDSRGSPPLGGGEVFLRVRNINSTLTAANWVDEGMVKRIRGVSFSTRVSPQLENRIIYAARGIFNRFIPDVHIHTDHRSGSAGGRSPGYGVSLVAETTTGCLLSVDVTVSYPSVDEINEESEKPELTSPEDLGVQAASMLLEEVAQGGVVDSTHQGLLFILCALCPPDVSKVRVGQLTPYGIETLRNIRDFLDVKFIIKPDPNSNTVTLKCVGAGVKNLARKIS