Gene Details:
- Gene ID: Zm00001eb316080
- Gene Symbol: RCL1
- Gene Name: RNA 3’-terminal phosphate cyclase1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- A conserved RNA 3′-terminal phosphate cyclase (RCL)-like protein, RCL1, that functions in 18S rRNA maturation. RCL1 is highly expressed in the embryo and endosperm during early seed development.
- Loss of RCL1 function resulted in lethality due to aborted embryo cell differentiation.
- RCL1, that functions in 18S rRNA maturation. RCL1 is highly expressed in the embryo and endosperm during early seed development.
- RCL1-mediated 18S pre-rRNA processing is essential for ribosome function and messenger RNA translation during maize seed development.
- The RCL1 mutant exhibits aberrant embryo and endosperm development.
- The RCL1 mutant shows multiple cell differentiation defects
Function-related keywords:
- development , seed , embryo , endosperm , seed-development , endosperm-development , phosphate , embryo-development , protein-translation
Literature:
- Maize RNA 3'-terminal phosphate cyclase-like protein promotes 18S pre-rRNA cleavage and is important for kernel development. DOI: 10.1093/plcell/koac052 ; PMID: 35167702
- Maize Shrek1 encodes a WD40 protein that regulates pre-rRNA processing in ribosome biogenesis. DOI: 10.1093/plcell/koac216 ; PMID: 35867001
Related News:
Gene Resources:
- NCBI ID: LOC100191832
- UniProt accessions: B4FAC1
Sequences:
cDNA Sequence
- >Zm00001eb316080_T001
TCTATCTGACCCAACACGTGGGTCTTCTCCACTGCTGCAATAAAAATGCCTCAAGCTGCGGCCACCCGCCGGGACCAGCCTCGCCGCCGCGCGCCAAAACCCTAACCCCTCCCGGCGTCCGCCCCTGCCGCGTGACGGCCCCAGAGATGGGGCGAGACAAGAGCCGTCGTCTATACGGCAGCCGCCACTTCCGGCAGCGGCTGGTGCTGGCGACGCTCACCTCTACCGCTGTCACCATCGAGGACATCCGCTCTGGGGACGCTTCGCCGGGGCTCCGCCCTTACGAGGTCTCCCTCCTCCGCCTCCTCGACAAGATCTCAGACCATCACACCATTGACCTCAACGAGACAGGAACGAAGCTGAGGTACCGGCCGGGGGTGATTATAGGGGGAAAGGGCCTTGAGCACGACTGCGGGGTGCACCGGGGTATTGGATACTTTCTTGAGCCACTCATACTGCTTGGTCTATTTTCGAGGGCCCCTATATCGATTCGGCTTAAAGGAATCACTAATGATACAAAGGATCCTTCTGTGGATACTTTCCGGACAACAACCTTGCATATGCTCAAGCACTTTGGTGTTCCTCTGGATGGTTTCGATCTAAATATTGACAGCCGTGGATCTCCTCCTCTTGGTGGTGGTGAGGTGTTTCTCCGGGTTCGCAATATAAATAGCACATTGACGGCAGCAAATTGGGTAGATGAAGGTATGGTGAAGAGGATAAGGGGTGTTTCGTTCTCCACTAGAGTATCTCCACAGTTGGAAAACCGCATCATTTATGCTGCACGTGGAATCTTCAATCGTTTCATTCCTGATGTTCATATACACACGGATCATAGATCTGGTTCTGCTGGTGGGAGGTCACCAGGCTATGGTGTATCGTTAGTTGCTGAGACCACTACGGGATGCCTGCTCTCTGTAGATGTCACTGTGAGTTATCCTAGTGTTGATGAAATAAATGAAGAATCTGAGAAGCCTGAGCTGACTTCTCCGGAGGATCTTGGTGTTCAAGCTGCATCAATGCTACTAGAAGAGGTGGCTCAAGGAGGTGTTGTTGATTCTACACATCAGGGCCTCCTATTTATTCTGTGTGCTTTATGCCCACCGGATGTATCAAAGGTTCGTGTGGGACAGTTGACTCCATATGGTATAGAGACACTTCGAAACATCAGAGATTTTCTTGACGTCAAGTTCATCATCAAGCCTGATCCCAATTCAAACACCGTTACTTTAAAATGTGTTGGCGCGGGAGTGAAGAATCTTGCTCGGAAGATTTCATAAGCAACATGACCATTAATCTGATGAAGGATCCATGCCACATCAAGAGACTACTATGAGACCCTATTTGTAACTGCAAACAACAGTGTAGGAGTTTCCCTTAGCTGTTACTGCTGAAATTCTATTCGAGGTCCATGATGTCTTAGACATCACCGATGTACATCAGTATTAGAATGGATTGTTCTGATCATGATGCCCTGTATTGTCGACACATTTTTGCATCACATTGCTTCACTCCAACTATGCCATGACATGCTGATACATAGAAATGAAGAAAAGGTGACAAACGTCCAGACTAAATGTTTGTTTTACCATGTGCATTTTGTTTGATC
CDS Sequence
- >Zm00001eb316080_T001
ATGGGGCGAGACAAGAGCCGTCGTCTATACGGCAGCCGCCACTTCCGGCAGCGGCTGGTGCTGGCGACGCTCACCTCTACCGCTGTCACCATCGAGGACATCCGCTCTGGGGACGCTTCGCCGGGGCTCCGCCCTTACGAGGTCTCCCTCCTCCGCCTCCTCGACAAGATCTCAGACCATCACACCATTGACCTCAACGAGACAGGAACGAAGCTGAGGTACCGGCCGGGGGTGATTATAGGGGGAAAGGGCCTTGAGCACGACTGCGGGGTGCACCGGGGTATTGGATACTTTCTTGAGCCACTCATACTGCTTGGTCTATTTTCGAGGGCCCCTATATCGATTCGGCTTAAAGGAATCACTAATGATACAAAGGATCCTTCTGTGGATACTTTCCGGACAACAACCTTGCATATGCTCAAGCACTTTGGTGTTCCTCTGGATGGTTTCGATCTAAATATTGACAGCCGTGGATCTCCTCCTCTTGGTGGTGGTGAGGTGTTTCTCCGGGTTCGCAATATAAATAGCACATTGACGGCAGCAAATTGGGTAGATGAAGGTATGGTGAAGAGGATAAGGGGTGTTTCGTTCTCCACTAGAGTATCTCCACAGTTGGAAAACCGCATCATTTATGCTGCACGTGGAATCTTCAATCGTTTCATTCCTGATGTTCATATACACACGGATCATAGATCTGGTTCTGCTGGTGGGAGGTCACCAGGCTATGGTGTATCGTTAGTTGCTGAGACCACTACGGGATGCCTGCTCTCTGTAGATGTCACTGTGAGTTATCCTAGTGTTGATGAAATAAATGAAGAATCTGAGAAGCCTGAGCTGACTTCTCCGGAGGATCTTGGTGTTCAAGCTGCATCAATGCTACTAGAAGAGGTGGCTCAAGGAGGTGTTGTTGATTCTACACATCAGGGCCTCCTATTTATTCTGTGTGCTTTATGCCCACCGGATGTATCAAAGGTTCGTGTGGGACAGTTGACTCCATATGGTATAGAGACACTTCGAAACATCAGAGATTTTCTTGACGTCAAGTTCATCATCAAGCCTGATCCCAATTCAAACACCGTTACTTTAAAATGTGTTGGCGCGGGAGTGAAGAATCTTGCTCGGAAGATTTCATAA
Protein Sequence
- >Zm00001eb316080_P001
MGRDKSRRLYGSRHFRQRLVLATLTSTAVTIEDIRSGDASPGLRPYEVSLLRLLDKISDHHTIDLNETGTKLRYRPGVIIGGKGLEHDCGVHRGIGYFLEPLILLGLFSRAPISIRLKGITNDTKDPSVDTFRTTTLHMLKHFGVPLDGFDLNIDSRGSPPLGGGEVFLRVRNINSTLTAANWVDEGMVKRIRGVSFSTRVSPQLENRIIYAARGIFNRFIPDVHIHTDHRSGSAGGRSPGYGVSLVAETTTGCLLSVDVTVSYPSVDEINEESEKPELTSPEDLGVQAASMLLEEVAQGGVVDSTHQGLLFILCALCPPDVSKVRVGQLTPYGIETLRNIRDFLDVKFIIKPDPNSNTVTLKCVGAGVKNLARKIS
Source: Genetic information comes from the article